Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_09355

Experiment: m.b. Chlorite 0.08 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_09350 and CA264_09355 are separated by 351 nucleotidesCA264_09355 and CA264_09360 are separated by 109 nucleotides CA264_09350: CA264_09350 - phosphoglucomutase, at 2,184,967 to 2,186,700 _09350 CA264_09355: CA264_09355 - nitroreductase, at 2,187,052 to 2,187,639 _09355 CA264_09360: CA264_09360 - phosphoglycerate kinase, at 2,187,749 to 2,188,948 _09360 Position (kb) 2187 2188Strain fitness (log2 ratio) -2 -1 0 1at 2186.698 kb on + strandat 2186.699 kb on - strandat 2186.709 kb on - strandat 2186.838 kb on + strandat 2186.995 kb on - strandat 2186.995 kb on - strandat 2187.000 kb on + strandat 2187.072 kb on + strandat 2187.074 kb on + strandat 2187.086 kb on + strandat 2187.086 kb on + strandat 2187.213 kb on + strand, within CA264_09355at 2187.218 kb on + strand, within CA264_09355at 2187.221 kb on - strand, within CA264_09355at 2187.266 kb on + strand, within CA264_09355at 2187.291 kb on + strand, within CA264_09355at 2187.472 kb on + strand, within CA264_09355at 2187.473 kb on - strand, within CA264_09355at 2187.528 kb on - strand, within CA264_09355at 2187.604 kb on - strandat 2187.657 kb on + strandat 2187.658 kb on - strandat 2187.658 kb on - strandat 2187.658 kb on - strandat 2187.658 kb on - strandat 2187.660 kb on + strandat 2187.663 kb on - strandat 2187.677 kb on - strandat 2187.957 kb on - strand, within CA264_09360at 2188.418 kb on + strand, within CA264_09360at 2188.584 kb on + strand, within CA264_09360

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chlorite 0.08 mM
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2,186,698 + -1.7
2,186,699 - -1.5
2,186,709 - -0.2
2,186,838 + -0.7
2,186,995 - -0.8
2,186,995 - +0.3
2,187,000 + +0.1
2,187,072 + -1.3
2,187,074 + +0.4
2,187,086 + -0.4
2,187,086 + -0.6
2,187,213 + CA264_09355 0.27 +0.2
2,187,218 + CA264_09355 0.28 -0.2
2,187,221 - CA264_09355 0.29 -1.2
2,187,266 + CA264_09355 0.36 -2.0
2,187,291 + CA264_09355 0.41 -0.1
2,187,472 + CA264_09355 0.71 -0.3
2,187,473 - CA264_09355 0.72 +0.7
2,187,528 - CA264_09355 0.81 -1.3
2,187,604 - -0.4
2,187,657 + -0.8
2,187,658 - -0.1
2,187,658 - +0.0
2,187,658 - -0.7
2,187,658 - +0.1
2,187,660 + -0.7
2,187,663 - -0.2
2,187,677 - +0.4
2,187,957 - CA264_09360 0.17 -2.4
2,188,418 + CA264_09360 0.56 -2.2
2,188,584 + CA264_09360 0.70 -1.2

Or see this region's nucleotide sequence