Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_08910

Experiment: m.b. Chlorite 0.08 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_08905 and CA264_08910 are separated by 137 nucleotidesCA264_08910 and CA264_08915 are separated by 190 nucleotides CA264_08905: CA264_08905 - metallophosphatase, at 2,079,733 to 2,080,992 _08905 CA264_08910: CA264_08910 - peptidase M28, at 2,081,130 to 2,082,683 _08910 CA264_08915: CA264_08915 - hypothetical protein, at 2,082,874 to 2,083,821 _08915 Position (kb) 2081 2082 2083Strain fitness (log2 ratio) -2 -1 0 1at 2080.195 kb on + strand, within CA264_08905at 2080.196 kb on - strand, within CA264_08905at 2080.201 kb on + strand, within CA264_08905at 2080.223 kb on + strand, within CA264_08905at 2080.226 kb on - strand, within CA264_08905at 2080.229 kb on + strand, within CA264_08905at 2080.230 kb on - strand, within CA264_08905at 2080.230 kb on - strand, within CA264_08905at 2080.274 kb on + strand, within CA264_08905at 2080.284 kb on - strand, within CA264_08905at 2080.284 kb on - strand, within CA264_08905at 2080.284 kb on - strand, within CA264_08905at 2080.284 kb on - strand, within CA264_08905at 2080.383 kb on - strand, within CA264_08905at 2080.411 kb on + strand, within CA264_08905at 2080.420 kb on - strand, within CA264_08905at 2080.433 kb on + strand, within CA264_08905at 2080.434 kb on - strand, within CA264_08905at 2080.477 kb on + strand, within CA264_08905at 2080.603 kb on - strand, within CA264_08905at 2080.617 kb on + strand, within CA264_08905at 2080.618 kb on - strand, within CA264_08905at 2080.618 kb on - strand, within CA264_08905at 2080.621 kb on - strand, within CA264_08905at 2080.661 kb on - strand, within CA264_08905at 2080.682 kb on + strand, within CA264_08905at 2080.683 kb on - strand, within CA264_08905at 2080.706 kb on + strand, within CA264_08905at 2080.707 kb on - strand, within CA264_08905at 2080.879 kb on + strandat 2080.903 kb on + strandat 2080.903 kb on + strandat 2080.903 kb on + strandat 2080.903 kb on + strandat 2080.904 kb on - strandat 2080.908 kb on - strandat 2081.064 kb on - strandat 2081.064 kb on - strandat 2081.102 kb on + strandat 2081.102 kb on + strandat 2081.102 kb on - strandat 2081.103 kb on - strandat 2081.104 kb on + strandat 2081.104 kb on + strandat 2081.121 kb on - strandat 2081.144 kb on - strandat 2081.170 kb on + strandat 2081.180 kb on + strandat 2081.198 kb on - strandat 2081.210 kb on - strandat 2081.225 kb on - strandat 2081.349 kb on - strand, within CA264_08910at 2081.349 kb on - strand, within CA264_08910at 2081.422 kb on + strand, within CA264_08910at 2081.516 kb on - strand, within CA264_08910at 2081.584 kb on + strand, within CA264_08910at 2081.585 kb on - strand, within CA264_08910at 2081.624 kb on + strand, within CA264_08910at 2081.624 kb on + strand, within CA264_08910at 2081.726 kb on + strand, within CA264_08910at 2081.726 kb on + strand, within CA264_08910at 2081.819 kb on - strand, within CA264_08910at 2081.819 kb on - strand, within CA264_08910at 2081.831 kb on + strand, within CA264_08910at 2081.831 kb on + strand, within CA264_08910at 2081.849 kb on + strand, within CA264_08910at 2081.849 kb on + strand, within CA264_08910at 2081.849 kb on + strand, within CA264_08910at 2081.850 kb on - strand, within CA264_08910at 2081.851 kb on + strand, within CA264_08910at 2081.852 kb on - strand, within CA264_08910at 2081.871 kb on + strand, within CA264_08910at 2081.871 kb on + strand, within CA264_08910at 2081.876 kb on + strand, within CA264_08910at 2081.876 kb on + strand, within CA264_08910at 2081.877 kb on - strand, within CA264_08910at 2081.883 kb on + strand, within CA264_08910at 2081.883 kb on + strand, within CA264_08910at 2081.893 kb on + strand, within CA264_08910at 2081.894 kb on - strand, within CA264_08910at 2081.907 kb on - strand, within CA264_08910at 2081.957 kb on + strand, within CA264_08910at 2082.006 kb on + strand, within CA264_08910at 2082.007 kb on - strand, within CA264_08910at 2082.017 kb on - strand, within CA264_08910at 2082.068 kb on + strand, within CA264_08910at 2082.074 kb on + strand, within CA264_08910at 2082.075 kb on - strand, within CA264_08910at 2082.117 kb on + strand, within CA264_08910at 2082.118 kb on - strand, within CA264_08910at 2082.266 kb on - strand, within CA264_08910at 2082.266 kb on - strand, within CA264_08910at 2082.301 kb on - strand, within CA264_08910at 2082.306 kb on + strand, within CA264_08910at 2082.307 kb on - strand, within CA264_08910at 2082.322 kb on + strand, within CA264_08910at 2082.322 kb on + strand, within CA264_08910at 2082.322 kb on + strand, within CA264_08910at 2082.434 kb on + strand, within CA264_08910at 2082.435 kb on - strand, within CA264_08910at 2082.439 kb on + strand, within CA264_08910at 2082.439 kb on + strand, within CA264_08910at 2082.440 kb on - strand, within CA264_08910at 2082.449 kb on + strand, within CA264_08910at 2082.449 kb on + strand, within CA264_08910at 2082.468 kb on + strand, within CA264_08910at 2082.469 kb on - strand, within CA264_08910at 2082.495 kb on + strand, within CA264_08910at 2082.496 kb on - strand, within CA264_08910at 2082.500 kb on + strand, within CA264_08910at 2082.501 kb on - strand, within CA264_08910at 2082.536 kb on - strandat 2082.541 kb on + strandat 2082.545 kb on + strandat 2082.545 kb on + strandat 2082.545 kb on + strandat 2082.545 kb on + strandat 2082.546 kb on - strandat 2082.546 kb on - strandat 2082.546 kb on - strandat 2082.546 kb on - strandat 2082.547 kb on + strandat 2082.547 kb on + strandat 2082.547 kb on + strandat 2082.547 kb on + strandat 2082.548 kb on - strandat 2082.548 kb on - strandat 2082.548 kb on - strandat 2082.556 kb on - strandat 2082.676 kb on + strandat 2082.695 kb on + strandat 2082.696 kb on - strandat 2082.700 kb on - strandat 2082.702 kb on - strandat 2082.702 kb on - strandat 2082.811 kb on - strandat 2082.885 kb on - strandat 2082.885 kb on - strandat 2082.885 kb on - strandat 2082.887 kb on + strandat 2082.888 kb on - strandat 2082.888 kb on - strandat 2082.888 kb on - strandat 2082.888 kb on - strandat 2082.931 kb on + strandat 2082.945 kb on - strandat 2083.015 kb on + strand, within CA264_08915at 2083.098 kb on + strand, within CA264_08915at 2083.140 kb on + strand, within CA264_08915at 2083.141 kb on - strand, within CA264_08915at 2083.179 kb on - strand, within CA264_08915at 2083.263 kb on - strand, within CA264_08915at 2083.302 kb on - strand, within CA264_08915at 2083.572 kb on + strand, within CA264_08915at 2083.572 kb on + strand, within CA264_08915at 2083.574 kb on + strand, within CA264_08915at 2083.575 kb on - strand, within CA264_08915at 2083.575 kb on - strand, within CA264_08915at 2083.575 kb on - strand, within CA264_08915at 2083.580 kb on - strand, within CA264_08915at 2083.580 kb on - strand, within CA264_08915at 2083.580 kb on - strand, within CA264_08915at 2083.597 kb on - strand, within CA264_08915at 2083.597 kb on - strand, within CA264_08915at 2083.610 kb on + strand, within CA264_08915at 2083.611 kb on - strand, within CA264_08915at 2083.611 kb on - strand, within CA264_08915

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chlorite 0.08 mM
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2,080,195 + CA264_08905 0.37 +0.8
2,080,196 - CA264_08905 0.37 +0.2
2,080,201 + CA264_08905 0.37 +0.4
2,080,223 + CA264_08905 0.39 +0.3
2,080,226 - CA264_08905 0.39 -0.1
2,080,229 + CA264_08905 0.39 -0.7
2,080,230 - CA264_08905 0.39 -0.2
2,080,230 - CA264_08905 0.39 -0.1
2,080,274 + CA264_08905 0.43 +0.6
2,080,284 - CA264_08905 0.44 -0.4
2,080,284 - CA264_08905 0.44 -0.7
2,080,284 - CA264_08905 0.44 -0.2
2,080,284 - CA264_08905 0.44 +1.0
2,080,383 - CA264_08905 0.52 +0.2
2,080,411 + CA264_08905 0.54 +0.2
2,080,420 - CA264_08905 0.55 -0.1
2,080,433 + CA264_08905 0.56 -0.2
2,080,434 - CA264_08905 0.56 +0.1
2,080,477 + CA264_08905 0.59 -0.9
2,080,603 - CA264_08905 0.69 -1.3
2,080,617 + CA264_08905 0.70 -0.1
2,080,618 - CA264_08905 0.70 +0.7
2,080,618 - CA264_08905 0.70 +0.6
2,080,621 - CA264_08905 0.70 +0.1
2,080,661 - CA264_08905 0.74 -0.9
2,080,682 + CA264_08905 0.75 -0.0
2,080,683 - CA264_08905 0.75 +0.1
2,080,706 + CA264_08905 0.77 -0.6
2,080,707 - CA264_08905 0.77 -0.1
2,080,879 + -0.1
2,080,903 + +0.7
2,080,903 + -0.1
2,080,903 + +1.3
2,080,903 + +0.4
2,080,904 - -0.0
2,080,908 - -0.8
2,081,064 - -0.2
2,081,064 - -0.3
2,081,102 + -1.6
2,081,102 + -0.0
2,081,102 - -0.0
2,081,103 - +0.4
2,081,104 + -0.3
2,081,104 + +0.1
2,081,121 - -0.2
2,081,144 - -0.1
2,081,170 + -0.3
2,081,180 + -1.1
2,081,198 - +1.1
2,081,210 - -0.2
2,081,225 - -0.2
2,081,349 - CA264_08910 0.14 +0.2
2,081,349 - CA264_08910 0.14 -0.8
2,081,422 + CA264_08910 0.19 -0.4
2,081,516 - CA264_08910 0.25 -0.5
2,081,584 + CA264_08910 0.29 -0.1
2,081,585 - CA264_08910 0.29 +0.4
2,081,624 + CA264_08910 0.32 -0.9
2,081,624 + CA264_08910 0.32 -0.3
2,081,726 + CA264_08910 0.38 +0.1
2,081,726 + CA264_08910 0.38 -0.2
2,081,819 - CA264_08910 0.44 -0.3
2,081,819 - CA264_08910 0.44 -0.4
2,081,831 + CA264_08910 0.45 +0.0
2,081,831 + CA264_08910 0.45 -0.2
2,081,849 + CA264_08910 0.46 +0.7
2,081,849 + CA264_08910 0.46 -0.0
2,081,849 + CA264_08910 0.46 -0.9
2,081,850 - CA264_08910 0.46 +0.0
2,081,851 + CA264_08910 0.46 -0.6
2,081,852 - CA264_08910 0.46 -0.4
2,081,871 + CA264_08910 0.48 -1.8
2,081,871 + CA264_08910 0.48 -0.3
2,081,876 + CA264_08910 0.48 -0.9
2,081,876 + CA264_08910 0.48 -0.3
2,081,877 - CA264_08910 0.48 -0.6
2,081,883 + CA264_08910 0.48 -0.6
2,081,883 + CA264_08910 0.48 +1.0
2,081,893 + CA264_08910 0.49 -0.4
2,081,894 - CA264_08910 0.49 -0.9
2,081,907 - CA264_08910 0.50 -0.1
2,081,957 + CA264_08910 0.53 +0.8
2,082,006 + CA264_08910 0.56 -0.8
2,082,007 - CA264_08910 0.56 -0.7
2,082,017 - CA264_08910 0.57 -1.0
2,082,068 + CA264_08910 0.60 -2.0
2,082,074 + CA264_08910 0.61 -0.8
2,082,075 - CA264_08910 0.61 +1.6
2,082,117 + CA264_08910 0.64 -0.4
2,082,118 - CA264_08910 0.64 +0.0
2,082,266 - CA264_08910 0.73 -0.2
2,082,266 - CA264_08910 0.73 -0.2
2,082,301 - CA264_08910 0.75 -1.5
2,082,306 + CA264_08910 0.76 -1.6
2,082,307 - CA264_08910 0.76 -0.7
2,082,322 + CA264_08910 0.77 +0.4
2,082,322 + CA264_08910 0.77 -0.5
2,082,322 + CA264_08910 0.77 +0.2
2,082,434 + CA264_08910 0.84 +0.9
2,082,435 - CA264_08910 0.84 -0.5
2,082,439 + CA264_08910 0.84 +1.4
2,082,439 + CA264_08910 0.84 +0.6
2,082,440 - CA264_08910 0.84 -0.6
2,082,449 + CA264_08910 0.85 +0.9
2,082,449 + CA264_08910 0.85 -0.0
2,082,468 + CA264_08910 0.86 +0.3
2,082,469 - CA264_08910 0.86 -1.1
2,082,495 + CA264_08910 0.88 -0.3
2,082,496 - CA264_08910 0.88 -0.0
2,082,500 + CA264_08910 0.88 -0.3
2,082,501 - CA264_08910 0.88 +0.5
2,082,536 - +0.1
2,082,541 + -0.0
2,082,545 + -0.4
2,082,545 + -1.4
2,082,545 + +0.6
2,082,545 + -0.0
2,082,546 - -1.4
2,082,546 - +1.1
2,082,546 - +0.6
2,082,546 - -0.1
2,082,547 + -0.3
2,082,547 + +1.0
2,082,547 + -0.0
2,082,547 + -0.9
2,082,548 - -0.5
2,082,548 - -0.4
2,082,548 - +1.3
2,082,556 - -0.2
2,082,676 + -0.1
2,082,695 + -0.3
2,082,696 - +0.2
2,082,700 - -0.5
2,082,702 - -1.0
2,082,702 - -0.3
2,082,811 - -1.4
2,082,885 - -0.7
2,082,885 - +0.2
2,082,885 - -0.3
2,082,887 + -0.2
2,082,888 - +0.3
2,082,888 - -0.3
2,082,888 - -0.0
2,082,888 - -0.1
2,082,931 + +0.4
2,082,945 - -0.3
2,083,015 + CA264_08915 0.15 -0.1
2,083,098 + CA264_08915 0.24 -1.0
2,083,140 + CA264_08915 0.28 +0.1
2,083,141 - CA264_08915 0.28 -0.3
2,083,179 - CA264_08915 0.32 -0.3
2,083,263 - CA264_08915 0.41 -0.4
2,083,302 - CA264_08915 0.45 +0.6
2,083,572 + CA264_08915 0.74 +1.0
2,083,572 + CA264_08915 0.74 -0.9
2,083,574 + CA264_08915 0.74 -0.2
2,083,575 - CA264_08915 0.74 +0.6
2,083,575 - CA264_08915 0.74 -0.2
2,083,575 - CA264_08915 0.74 -0.3
2,083,580 - CA264_08915 0.74 -0.8
2,083,580 - CA264_08915 0.74 -1.6
2,083,580 - CA264_08915 0.74 +0.1
2,083,597 - CA264_08915 0.76 -0.3
2,083,597 - CA264_08915 0.76 -0.1
2,083,610 + CA264_08915 0.78 -0.8
2,083,611 - CA264_08915 0.78 +1.7
2,083,611 - CA264_08915 0.78 -0.8

Or see this region's nucleotide sequence