Experiment: m.b. Chlorite 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_08710 and CA264_08715 are separated by 37 nucleotides CA264_08715 and CA264_08720 are separated by 145 nucleotides
CA264_08710: CA264_08710 - sugar kinase, at 2,024,864 to 2,026,114
_08710
CA264_08715: CA264_08715 - glucosamine-6-phosphate deaminase, at 2,026,152 to 2,028,116
_08715
CA264_08720: CA264_08720 - RND transporter, at 2,028,262 to 2,029,695
_08720
Position (kb)
2026
2027
2028
2029 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2025.166 kb on + strand, within CA264_08710 at 2025.167 kb on - strand, within CA264_08710 at 2025.225 kb on - strand, within CA264_08710 at 2025.230 kb on + strand, within CA264_08710 at 2025.231 kb on - strand, within CA264_08710 at 2025.322 kb on - strand, within CA264_08710 at 2025.383 kb on + strand, within CA264_08710 at 2025.578 kb on - strand, within CA264_08710 at 2025.883 kb on - strand, within CA264_08710 at 2025.883 kb on - strand, within CA264_08710 at 2025.887 kb on - strand, within CA264_08710 at 2025.911 kb on - strand, within CA264_08710 at 2025.914 kb on - strand, within CA264_08710 at 2025.984 kb on - strand, within CA264_08710 at 2026.018 kb on - strand at 2026.018 kb on - strand at 2026.144 kb on - strand at 2026.144 kb on - strand at 2026.144 kb on - strand at 2026.145 kb on + strand at 2026.342 kb on + strand at 2026.380 kb on + strand, within CA264_08715 at 2026.381 kb on - strand, within CA264_08715 at 2026.381 kb on - strand, within CA264_08715 at 2026.418 kb on + strand, within CA264_08715 at 2026.456 kb on - strand, within CA264_08715 at 2026.456 kb on - strand, within CA264_08715 at 2026.458 kb on + strand, within CA264_08715 at 2026.488 kb on + strand, within CA264_08715 at 2026.591 kb on - strand, within CA264_08715 at 2026.602 kb on + strand, within CA264_08715 at 2026.602 kb on + strand, within CA264_08715 at 2026.603 kb on - strand, within CA264_08715 at 2026.615 kb on + strand, within CA264_08715 at 2026.624 kb on + strand, within CA264_08715 at 2026.625 kb on - strand, within CA264_08715 at 2026.680 kb on - strand, within CA264_08715 at 2026.920 kb on + strand, within CA264_08715 at 2027.151 kb on + strand, within CA264_08715 at 2027.152 kb on - strand, within CA264_08715 at 2027.152 kb on - strand, within CA264_08715 at 2027.152 kb on - strand, within CA264_08715 at 2027.152 kb on - strand, within CA264_08715 at 2027.164 kb on + strand, within CA264_08715 at 2027.164 kb on + strand, within CA264_08715 at 2027.164 kb on + strand, within CA264_08715 at 2027.164 kb on + strand, within CA264_08715 at 2027.164 kb on + strand, within CA264_08715 at 2027.165 kb on - strand, within CA264_08715 at 2027.165 kb on - strand, within CA264_08715 at 2027.169 kb on - strand, within CA264_08715 at 2027.175 kb on - strand, within CA264_08715 at 2027.183 kb on - strand, within CA264_08715 at 2027.273 kb on + strand, within CA264_08715 at 2027.321 kb on + strand, within CA264_08715 at 2027.321 kb on + strand, within CA264_08715 at 2027.322 kb on - strand, within CA264_08715 at 2027.439 kb on - strand, within CA264_08715 at 2027.711 kb on - strand, within CA264_08715 at 2027.711 kb on - strand, within CA264_08715 at 2027.786 kb on + strand, within CA264_08715 at 2027.786 kb on + strand, within CA264_08715 at 2027.787 kb on - strand, within CA264_08715 at 2027.787 kb on - strand, within CA264_08715 at 2027.798 kb on - strand, within CA264_08715 at 2027.860 kb on - strand, within CA264_08715 at 2027.949 kb on - strand at 2028.141 kb on + strand at 2028.141 kb on + strand at 2028.142 kb on - strand at 2028.142 kb on - strand at 2028.142 kb on - strand at 2028.210 kb on - strand at 2028.220 kb on - strand at 2028.252 kb on + strand at 2028.253 kb on - strand at 2028.253 kb on - strand at 2028.264 kb on - strand at 2028.295 kb on - strand at 2028.386 kb on + strand at 2028.386 kb on + strand at 2028.521 kb on + strand, within CA264_08720 at 2028.551 kb on + strand, within CA264_08720 at 2028.671 kb on - strand, within CA264_08720 at 2028.677 kb on + strand, within CA264_08720 at 2028.677 kb on + strand at 2028.678 kb on - strand, within CA264_08720 at 2028.755 kb on - strand, within CA264_08720 at 2028.832 kb on - strand, within CA264_08720 at 2028.832 kb on - strand, within CA264_08720 at 2028.842 kb on - strand, within CA264_08720 at 2028.952 kb on + strand, within CA264_08720 at 2028.952 kb on + strand, within CA264_08720 at 2028.952 kb on + strand, within CA264_08720 at 2028.953 kb on - strand, within CA264_08720 at 2028.959 kb on + strand, within CA264_08720 at 2028.960 kb on - strand, within CA264_08720 at 2029.046 kb on - strand, within CA264_08720
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.08 mM remove 2,025,166 + CA264_08710 0.24 -1.2 2,025,167 - CA264_08710 0.24 +0.0 2,025,225 - CA264_08710 0.29 -1.3 2,025,230 + CA264_08710 0.29 -2.5 2,025,231 - CA264_08710 0.29 -0.4 2,025,322 - CA264_08710 0.37 -1.3 2,025,383 + CA264_08710 0.41 -2.0 2,025,578 - CA264_08710 0.57 -0.8 2,025,883 - CA264_08710 0.81 -2.1 2,025,883 - CA264_08710 0.81 -1.0 2,025,887 - CA264_08710 0.82 -2.4 2,025,911 - CA264_08710 0.84 -1.8 2,025,914 - CA264_08710 0.84 -0.9 2,025,984 - CA264_08710 0.90 -1.3 2,026,018 - -0.0 2,026,018 - -0.5 2,026,144 - +0.7 2,026,144 - +1.8 2,026,144 - -1.7 2,026,145 + -1.8 2,026,342 + -1.0 2,026,380 + CA264_08715 0.12 -0.7 2,026,381 - CA264_08715 0.12 -0.9 2,026,381 - CA264_08715 0.12 +1.3 2,026,418 + CA264_08715 0.14 -0.4 2,026,456 - CA264_08715 0.15 +0.3 2,026,456 - CA264_08715 0.15 -0.4 2,026,458 + CA264_08715 0.16 -0.2 2,026,488 + CA264_08715 0.17 +0.2 2,026,591 - CA264_08715 0.22 +0.5 2,026,602 + CA264_08715 0.23 -1.3 2,026,602 + CA264_08715 0.23 -1.9 2,026,603 - CA264_08715 0.23 -0.1 2,026,615 + CA264_08715 0.24 -0.8 2,026,624 + CA264_08715 0.24 -0.3 2,026,625 - CA264_08715 0.24 -2.0 2,026,680 - CA264_08715 0.27 -0.9 2,026,920 + CA264_08715 0.39 -1.4 2,027,151 + CA264_08715 0.51 -2.4 2,027,152 - CA264_08715 0.51 -0.9 2,027,152 - CA264_08715 0.51 +0.6 2,027,152 - CA264_08715 0.51 -0.7 2,027,152 - CA264_08715 0.51 +0.1 2,027,164 + CA264_08715 0.52 -3.1 2,027,164 + CA264_08715 0.52 -3.0 2,027,164 + CA264_08715 0.52 -2.9 2,027,164 + CA264_08715 0.52 -0.7 2,027,164 + CA264_08715 0.52 -1.6 2,027,165 - CA264_08715 0.52 -3.4 2,027,165 - CA264_08715 0.52 -3.2 2,027,169 - CA264_08715 0.52 -1.0 2,027,175 - CA264_08715 0.52 -0.3 2,027,183 - CA264_08715 0.52 -2.4 2,027,273 + CA264_08715 0.57 -0.9 2,027,321 + CA264_08715 0.59 -0.7 2,027,321 + CA264_08715 0.59 -2.2 2,027,322 - CA264_08715 0.60 -0.6 2,027,439 - CA264_08715 0.65 -1.6 2,027,711 - CA264_08715 0.79 -1.2 2,027,711 - CA264_08715 0.79 -1.9 2,027,786 + CA264_08715 0.83 -1.9 2,027,786 + CA264_08715 0.83 -4.3 2,027,787 - CA264_08715 0.83 -1.4 2,027,787 - CA264_08715 0.83 -0.5 2,027,798 - CA264_08715 0.84 -0.5 2,027,860 - CA264_08715 0.87 +0.6 2,027,949 - -0.9 2,028,141 + +0.2 2,028,141 + +0.3 2,028,142 - +0.9 2,028,142 - -0.3 2,028,142 - -0.3 2,028,210 - -0.7 2,028,220 - -0.1 2,028,252 + -0.1 2,028,253 - -0.3 2,028,253 - +0.4 2,028,264 - +0.7 2,028,295 - -0.4 2,028,386 + +0.4 2,028,386 + +0.4 2,028,521 + CA264_08720 0.18 -0.1 2,028,551 + CA264_08720 0.20 -0.1 2,028,671 - CA264_08720 0.29 -0.6 2,028,677 + CA264_08720 0.29 +1.3 2,028,677 + +2.3 2,028,678 - CA264_08720 0.29 -0.6 2,028,755 - CA264_08720 0.34 +0.4 2,028,832 - CA264_08720 0.40 -0.0 2,028,832 - CA264_08720 0.40 +0.4 2,028,842 - CA264_08720 0.40 -0.0 2,028,952 + CA264_08720 0.48 +0.6 2,028,952 + CA264_08720 0.48 -0.5 2,028,952 + CA264_08720 0.48 +2.3 2,028,953 - CA264_08720 0.48 +0.2 2,028,959 + CA264_08720 0.49 -0.3 2,028,960 - CA264_08720 0.49 -0.2 2,029,046 - CA264_08720 0.55 -0.5
Or see this region's nucleotide sequence