Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_07255

Experiment: m.b. Chlorite 0.08 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_07250 and CA264_07255 are separated by 89 nucleotidesCA264_07255 and CA264_07260 are separated by 319 nucleotidesCA264_07260 and CA264_07265 are separated by 60 nucleotides CA264_07250: CA264_07250 - hypothetical protein, at 1,672,353 to 1,674,872 _07250 CA264_07255: CA264_07255 - cytochrome c oxidase subunit III, at 1,674,962 to 1,675,588 _07255 CA264_07260: CA264_07260 - hypothetical protein, at 1,675,908 to 1,676,456 _07260 CA264_07265: CA264_07265 - patatin, at 1,676,517 to 1,678,847 _07265 Position (kb) 1674 1675 1676Strain fitness (log2 ratio) -2 -1 0 1at 1674.015 kb on + strand, within CA264_07250at 1674.015 kb on + strand, within CA264_07250at 1674.087 kb on - strand, within CA264_07250at 1674.100 kb on - strand, within CA264_07250at 1674.100 kb on - strand, within CA264_07250at 1674.100 kb on - strand, within CA264_07250at 1674.152 kb on + strand, within CA264_07250at 1674.193 kb on + strand, within CA264_07250at 1674.194 kb on - strand, within CA264_07250at 1674.200 kb on + strand, within CA264_07250at 1674.201 kb on - strand, within CA264_07250at 1674.315 kb on + strand, within CA264_07250at 1674.315 kb on + strand, within CA264_07250at 1674.329 kb on - strand, within CA264_07250at 1674.334 kb on + strand, within CA264_07250at 1674.379 kb on + strand, within CA264_07250at 1674.380 kb on - strand, within CA264_07250at 1674.444 kb on - strand, within CA264_07250at 1674.618 kb on + strand, within CA264_07250at 1674.619 kb on - strand, within CA264_07250at 1674.619 kb on - strand, within CA264_07250at 1674.622 kb on + strandat 1674.657 kb on - strandat 1674.716 kb on + strandat 1674.744 kb on - strandat 1674.751 kb on + strandat 1674.751 kb on + strandat 1674.752 kb on - strandat 1674.752 kb on - strandat 1674.808 kb on + strandat 1674.809 kb on - strandat 1674.811 kb on - strandat 1674.816 kb on + strandat 1674.816 kb on + strandat 1674.817 kb on - strandat 1674.843 kb on + strandat 1674.843 kb on + strandat 1674.844 kb on - strandat 1674.856 kb on + strandat 1674.857 kb on - strandat 1674.889 kb on - strandat 1674.913 kb on + strandat 1674.913 kb on + strandat 1674.914 kb on - strandat 1674.914 kb on - strandat 1674.915 kb on + strandat 1674.946 kb on + strandat 1674.946 kb on + strandat 1674.947 kb on - strandat 1674.949 kb on - strandat 1674.958 kb on - strandat 1675.040 kb on + strand, within CA264_07255at 1675.075 kb on + strand, within CA264_07255at 1675.104 kb on + strand, within CA264_07255at 1675.104 kb on + strand, within CA264_07255at 1675.104 kb on + strand, within CA264_07255at 1675.104 kb on + strand, within CA264_07255at 1675.104 kb on + strand, within CA264_07255at 1675.105 kb on - strand, within CA264_07255at 1675.105 kb on - strand, within CA264_07255at 1675.178 kb on + strand, within CA264_07255at 1675.183 kb on - strand, within CA264_07255at 1675.188 kb on + strand, within CA264_07255at 1675.283 kb on + strand, within CA264_07255at 1675.283 kb on + strand, within CA264_07255at 1675.283 kb on + strand, within CA264_07255at 1675.332 kb on + strand, within CA264_07255at 1675.333 kb on - strand, within CA264_07255at 1675.333 kb on - strand, within CA264_07255at 1675.333 kb on - strand, within CA264_07255at 1675.358 kb on - strand, within CA264_07255at 1675.358 kb on - strand, within CA264_07255at 1675.358 kb on - strand, within CA264_07255at 1675.537 kb on + strandat 1675.537 kb on + strandat 1675.537 kb on + strandat 1675.562 kb on + strandat 1675.562 kb on + strandat 1675.661 kb on + strandat 1675.676 kb on + strandat 1675.677 kb on - strandat 1675.677 kb on - strandat 1675.682 kb on + strandat 1675.682 kb on + strandat 1675.683 kb on - strandat 1675.683 kb on - strandat 1675.691 kb on - strandat 1675.693 kb on - strandat 1675.693 kb on - strandat 1675.704 kb on - strandat 1675.762 kb on + strandat 1675.763 kb on - strandat 1675.763 kb on - strandat 1675.767 kb on - strandat 1675.799 kb on + strandat 1675.799 kb on + strandat 1675.800 kb on - strandat 1675.800 kb on - strandat 1675.801 kb on + strandat 1675.802 kb on - strandat 1675.802 kb on - strandat 1675.840 kb on - strandat 1675.849 kb on - strandat 1675.882 kb on + strandat 1675.883 kb on - strandat 1675.883 kb on - strandat 1675.883 kb on - strandat 1675.883 kb on - strandat 1675.888 kb on + strandat 1675.899 kb on + strandat 1675.899 kb on + strandat 1675.986 kb on - strand, within CA264_07260at 1675.987 kb on + strand, within CA264_07260at 1675.987 kb on + strand, within CA264_07260at 1675.987 kb on + strand, within CA264_07260at 1675.988 kb on - strand, within CA264_07260at 1675.992 kb on - strand, within CA264_07260at 1676.027 kb on + strand, within CA264_07260at 1676.121 kb on - strand, within CA264_07260at 1676.175 kb on + strand, within CA264_07260at 1676.176 kb on - strand, within CA264_07260at 1676.300 kb on + strand, within CA264_07260at 1676.322 kb on + strand, within CA264_07260at 1676.323 kb on - strand, within CA264_07260at 1676.377 kb on + strand, within CA264_07260at 1676.377 kb on + strand, within CA264_07260at 1676.377 kb on + strand, within CA264_07260at 1676.382 kb on + strand, within CA264_07260at 1676.437 kb on + strandat 1676.462 kb on - strandat 1676.467 kb on + strandat 1676.486 kb on + strandat 1676.511 kb on + strandat 1676.554 kb on + strandat 1676.555 kb on - strandat 1676.556 kb on + strandat 1676.557 kb on - strandat 1676.557 kb on - strandat 1676.560 kb on + strandat 1676.560 kb on + strandat 1676.560 kb on + strandat 1676.560 kb on + strandat 1676.560 kb on + strandat 1676.560 kb on + strandat 1676.560 kb on + strandat 1676.560 kb on + strandat 1676.560 kb on + strandat 1676.561 kb on - strandat 1676.561 kb on - strandat 1676.561 kb on - strandat 1676.561 kb on - strandat 1676.561 kb on - strandat 1676.561 kb on - strandat 1676.561 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chlorite 0.08 mM
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1,674,015 + CA264_07250 0.66 +0.9
1,674,015 + CA264_07250 0.66 -0.3
1,674,087 - CA264_07250 0.69 -0.4
1,674,100 - CA264_07250 0.69 +0.1
1,674,100 - CA264_07250 0.69 +0.1
1,674,100 - CA264_07250 0.69 -0.9
1,674,152 + CA264_07250 0.71 +0.1
1,674,193 + CA264_07250 0.73 -0.6
1,674,194 - CA264_07250 0.73 -1.3
1,674,200 + CA264_07250 0.73 -0.1
1,674,201 - CA264_07250 0.73 +1.7
1,674,315 + CA264_07250 0.78 -0.3
1,674,315 + CA264_07250 0.78 -0.5
1,674,329 - CA264_07250 0.78 -0.5
1,674,334 + CA264_07250 0.79 -0.1
1,674,379 + CA264_07250 0.80 +0.0
1,674,380 - CA264_07250 0.80 -2.1
1,674,444 - CA264_07250 0.83 +0.5
1,674,618 + CA264_07250 0.90 -0.7
1,674,619 - CA264_07250 0.90 -0.6
1,674,619 - CA264_07250 0.90 +0.2
1,674,622 + -0.2
1,674,657 - +0.0
1,674,716 + -0.4
1,674,744 - -0.0
1,674,751 + +0.3
1,674,751 + -0.2
1,674,752 - +0.0
1,674,752 - +1.1
1,674,808 + -0.3
1,674,809 - -0.1
1,674,811 - -0.3
1,674,816 + -0.8
1,674,816 + -0.8
1,674,817 - -0.3
1,674,843 + -1.5
1,674,843 + +0.3
1,674,844 - +0.2
1,674,856 + -0.2
1,674,857 - -0.7
1,674,889 - +0.5
1,674,913 + +1.0
1,674,913 + -1.0
1,674,914 - -1.3
1,674,914 - +0.3
1,674,915 + +0.0
1,674,946 + -0.0
1,674,946 + +1.0
1,674,947 - +0.2
1,674,949 - -0.3
1,674,958 - -0.7
1,675,040 + CA264_07255 0.12 -1.6
1,675,075 + CA264_07255 0.18 -1.4
1,675,104 + CA264_07255 0.23 +0.0
1,675,104 + CA264_07255 0.23 -0.4
1,675,104 + CA264_07255 0.23 +0.1
1,675,104 + CA264_07255 0.23 +1.0
1,675,104 + CA264_07255 0.23 +1.0
1,675,105 - CA264_07255 0.23 -1.0
1,675,105 - CA264_07255 0.23 +0.2
1,675,178 + CA264_07255 0.34 -1.3
1,675,183 - CA264_07255 0.35 -1.2
1,675,188 + CA264_07255 0.36 -1.4
1,675,283 + CA264_07255 0.51 -0.9
1,675,283 + CA264_07255 0.51 -0.8
1,675,283 + CA264_07255 0.51 -0.8
1,675,332 + CA264_07255 0.59 -0.7
1,675,333 - CA264_07255 0.59 -2.6
1,675,333 - CA264_07255 0.59 -1.2
1,675,333 - CA264_07255 0.59 -0.6
1,675,358 - CA264_07255 0.63 -1.3
1,675,358 - CA264_07255 0.63 -1.2
1,675,358 - CA264_07255 0.63 -1.0
1,675,537 + -1.6
1,675,537 + -0.2
1,675,537 + -0.6
1,675,562 + -0.7
1,675,562 + -1.3
1,675,661 + -0.3
1,675,676 + +0.8
1,675,677 - +0.4
1,675,677 - -0.1
1,675,682 + +0.3
1,675,682 + -0.8
1,675,683 - +0.3
1,675,683 - +0.7
1,675,691 - +1.2
1,675,693 - +0.1
1,675,693 - +0.9
1,675,704 - +0.1
1,675,762 + -0.4
1,675,763 - -0.2
1,675,763 - +0.5
1,675,767 - +0.1
1,675,799 + +0.2
1,675,799 + -0.3
1,675,800 - +0.7
1,675,800 - -0.0
1,675,801 + +1.2
1,675,802 - -0.6
1,675,802 - -0.2
1,675,840 - -1.1
1,675,849 - +0.3
1,675,882 + -0.4
1,675,883 - +0.4
1,675,883 - +0.1
1,675,883 - +0.3
1,675,883 - +1.2
1,675,888 + -0.3
1,675,899 + +0.3
1,675,899 + +0.7
1,675,986 - CA264_07260 0.14 -0.1
1,675,987 + CA264_07260 0.14 -0.3
1,675,987 + CA264_07260 0.14 +1.6
1,675,987 + CA264_07260 0.14 +0.6
1,675,988 - CA264_07260 0.15 -0.0
1,675,992 - CA264_07260 0.15 +0.3
1,676,027 + CA264_07260 0.22 +1.3
1,676,121 - CA264_07260 0.39 -0.2
1,676,175 + CA264_07260 0.49 -0.8
1,676,176 - CA264_07260 0.49 -1.3
1,676,300 + CA264_07260 0.71 -0.1
1,676,322 + CA264_07260 0.75 +0.0
1,676,323 - CA264_07260 0.76 +1.2
1,676,377 + CA264_07260 0.85 -0.2
1,676,377 + CA264_07260 0.85 +0.1
1,676,377 + CA264_07260 0.85 -0.1
1,676,382 + CA264_07260 0.86 +0.6
1,676,437 + -0.3
1,676,462 - +1.1
1,676,467 + +0.3
1,676,486 + +1.0
1,676,511 + -0.0
1,676,554 + +0.3
1,676,555 - +0.3
1,676,556 + -0.8
1,676,557 - +1.7
1,676,557 - +0.3
1,676,560 + +0.5
1,676,560 + -0.4
1,676,560 + +0.2
1,676,560 + +0.2
1,676,560 + -0.4
1,676,560 + +1.0
1,676,560 + +0.4
1,676,560 + +0.1
1,676,560 + +1.2
1,676,561 - +0.3
1,676,561 - +1.4
1,676,561 - -0.3
1,676,561 - +0.8
1,676,561 - +0.1
1,676,561 - +1.2
1,676,561 - +0.6

Or see this region's nucleotide sequence