Experiment: m.b. Chlorite 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_06280 and CA264_06285 overlap by 61 nucleotides CA264_06285 and CA264_06290 are separated by 1 nucleotides CA264_06290 and CA264_06295 are separated by 122 nucleotides CA264_06295 and CA264_06300 are separated by 27 nucleotides
CA264_06280: CA264_06280 - sodium:solute symporter, at 1,461,581 to 1,463,320
_06280
CA264_06285: CA264_06285 - N-acetyltransferase, at 1,463,260 to 1,463,712
_06285
CA264_06290: CA264_06290 - amino-acid racemase, at 1,463,714 to 1,464,787
_06290
CA264_06295: CA264_06295 - carbonic anhydrase, at 1,464,910 to 1,465,533
_06295
CA264_06300: CA264_06300 - universal stress protein UspA, at 1,465,561 to 1,466,481
_06300
Position (kb)
1463
1464
1465 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1462.767 kb on + strand, within CA264_06280 at 1462.767 kb on + strand, within CA264_06280 at 1462.807 kb on + strand, within CA264_06280 at 1462.808 kb on - strand, within CA264_06280 at 1462.938 kb on + strand, within CA264_06280 at 1463.104 kb on + strand, within CA264_06280 at 1463.104 kb on + strand, within CA264_06280 at 1463.104 kb on + strand, within CA264_06280 at 1463.120 kb on - strand, within CA264_06280 at 1463.122 kb on + strand, within CA264_06280 at 1463.123 kb on - strand, within CA264_06280 at 1463.127 kb on + strand, within CA264_06280 at 1463.127 kb on + strand, within CA264_06280 at 1463.127 kb on + strand, within CA264_06280 at 1463.127 kb on + strand, within CA264_06280 at 1463.128 kb on - strand, within CA264_06280 at 1463.132 kb on - strand, within CA264_06280 at 1463.132 kb on - strand, within CA264_06280 at 1463.213 kb on + strand at 1463.213 kb on + strand at 1463.214 kb on - strand at 1463.229 kb on + strand at 1463.229 kb on + strand at 1463.230 kb on - strand at 1463.232 kb on + strand at 1463.232 kb on + strand at 1463.233 kb on - strand at 1463.234 kb on + strand at 1463.334 kb on - strand, within CA264_06285 at 1463.404 kb on + strand, within CA264_06285 at 1463.472 kb on - strand, within CA264_06285 at 1463.660 kb on - strand, within CA264_06285 at 1463.687 kb on - strand at 1463.687 kb on - strand at 1463.696 kb on - strand at 1463.697 kb on + strand at 1463.702 kb on + strand at 1463.703 kb on - strand at 1463.725 kb on - strand at 1463.745 kb on + strand at 1463.745 kb on + strand at 1463.745 kb on + strand at 1463.780 kb on - strand at 1463.940 kb on - strand, within CA264_06290 at 1463.941 kb on + strand, within CA264_06290 at 1463.942 kb on - strand, within CA264_06290 at 1463.944 kb on - strand, within CA264_06290 at 1463.977 kb on + strand, within CA264_06290 at 1463.979 kb on + strand, within CA264_06290 at 1463.979 kb on + strand, within CA264_06290 at 1463.980 kb on - strand, within CA264_06290 at 1463.980 kb on - strand, within CA264_06290 at 1463.984 kb on + strand, within CA264_06290 at 1464.191 kb on - strand, within CA264_06290 at 1464.191 kb on - strand, within CA264_06290 at 1464.237 kb on + strand, within CA264_06290 at 1464.237 kb on + strand, within CA264_06290 at 1464.237 kb on + strand, within CA264_06290 at 1464.246 kb on - strand, within CA264_06290 at 1464.495 kb on + strand, within CA264_06290 at 1464.588 kb on + strand, within CA264_06290 at 1464.688 kb on + strand at 1464.688 kb on + strand at 1464.693 kb on - strand at 1464.693 kb on - strand at 1464.695 kb on - strand at 1464.695 kb on - strand at 1464.729 kb on - strand at 1464.731 kb on - strand at 1464.791 kb on + strand at 1464.821 kb on - strand at 1464.822 kb on + strand at 1464.868 kb on + strand at 1464.868 kb on + strand at 1464.880 kb on - strand at 1464.890 kb on + strand at 1464.899 kb on + strand at 1464.899 kb on + strand at 1464.901 kb on + strand at 1464.901 kb on + strand at 1464.901 kb on + strand at 1464.901 kb on + strand at 1464.901 kb on + strand at 1464.901 kb on + strand at 1464.905 kb on + strand at 1464.905 kb on + strand at 1464.906 kb on - strand at 1464.906 kb on - strand at 1464.906 kb on - strand at 1464.910 kb on - strand at 1464.910 kb on - strand at 1464.916 kb on + strand at 1465.025 kb on - strand, within CA264_06295 at 1465.033 kb on - strand, within CA264_06295 at 1465.098 kb on + strand, within CA264_06295 at 1465.191 kb on + strand, within CA264_06295 at 1465.191 kb on + strand, within CA264_06295 at 1465.191 kb on + strand, within CA264_06295 at 1465.191 kb on + strand, within CA264_06295 at 1465.192 kb on - strand, within CA264_06295 at 1465.192 kb on - strand, within CA264_06295 at 1465.192 kb on - strand, within CA264_06295 at 1465.192 kb on - strand, within CA264_06295 at 1465.197 kb on + strand, within CA264_06295 at 1465.197 kb on + strand, within CA264_06295 at 1465.211 kb on - strand, within CA264_06295 at 1465.211 kb on - strand, within CA264_06295 at 1465.294 kb on + strand, within CA264_06295 at 1465.294 kb on + strand, within CA264_06295 at 1465.295 kb on - strand, within CA264_06295 at 1465.300 kb on - strand, within CA264_06295 at 1465.305 kb on + strand, within CA264_06295 at 1465.306 kb on - strand, within CA264_06295 at 1465.543 kb on - strand at 1465.612 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.08 mM remove 1,462,767 + CA264_06280 0.68 -1.6 1,462,767 + CA264_06280 0.68 -0.7 1,462,807 + CA264_06280 0.70 +0.1 1,462,808 - CA264_06280 0.71 -0.4 1,462,938 + CA264_06280 0.78 -1.0 1,463,104 + CA264_06280 0.88 -1.1 1,463,104 + CA264_06280 0.88 -0.2 1,463,104 + CA264_06280 0.88 +0.5 1,463,120 - CA264_06280 0.88 +0.0 1,463,122 + CA264_06280 0.89 -1.3 1,463,123 - CA264_06280 0.89 -0.6 1,463,127 + CA264_06280 0.89 -0.7 1,463,127 + CA264_06280 0.89 -0.6 1,463,127 + CA264_06280 0.89 -0.8 1,463,127 + CA264_06280 0.89 -1.4 1,463,128 - CA264_06280 0.89 -0.8 1,463,132 - CA264_06280 0.89 +0.1 1,463,132 - CA264_06280 0.89 -0.7 1,463,213 + -1.2 1,463,213 + -0.1 1,463,214 - -0.9 1,463,229 + -0.9 1,463,229 + -0.5 1,463,230 - +0.1 1,463,232 + -0.7 1,463,232 + +0.7 1,463,233 - -0.3 1,463,234 + -1.3 1,463,334 - CA264_06285 0.16 +1.3 1,463,404 + CA264_06285 0.32 -0.9 1,463,472 - CA264_06285 0.47 +0.1 1,463,660 - CA264_06285 0.88 +0.1 1,463,687 - +0.8 1,463,687 - +1.1 1,463,696 - +0.3 1,463,697 + -0.6 1,463,702 + +0.3 1,463,703 - -0.3 1,463,725 - +1.5 1,463,745 + +0.5 1,463,745 + +1.0 1,463,745 + +0.4 1,463,780 - +0.6 1,463,940 - CA264_06290 0.21 +0.6 1,463,941 + CA264_06290 0.21 -1.9 1,463,942 - CA264_06290 0.21 -0.2 1,463,944 - CA264_06290 0.21 +0.1 1,463,977 + CA264_06290 0.24 -1.0 1,463,979 + CA264_06290 0.25 +1.9 1,463,979 + CA264_06290 0.25 +0.4 1,463,980 - CA264_06290 0.25 +0.9 1,463,980 - CA264_06290 0.25 +1.3 1,463,984 + CA264_06290 0.25 -0.2 1,464,191 - CA264_06290 0.44 +0.2 1,464,191 - CA264_06290 0.44 -0.5 1,464,237 + CA264_06290 0.49 -0.5 1,464,237 + CA264_06290 0.49 +1.0 1,464,237 + CA264_06290 0.49 -0.0 1,464,246 - CA264_06290 0.50 +0.9 1,464,495 + CA264_06290 0.73 -0.0 1,464,588 + CA264_06290 0.81 +0.8 1,464,688 + +0.5 1,464,688 + +0.4 1,464,693 - -0.0 1,464,693 - +0.2 1,464,695 - +0.1 1,464,695 - +1.0 1,464,729 - +0.4 1,464,731 - -1.4 1,464,791 + +0.1 1,464,821 - +0.3 1,464,822 + -0.1 1,464,868 + +0.1 1,464,868 + -0.7 1,464,880 - -0.0 1,464,890 + -1.2 1,464,899 + -0.9 1,464,899 + +0.1 1,464,901 + -0.8 1,464,901 + +0.1 1,464,901 + -1.0 1,464,901 + +0.7 1,464,901 + +0.1 1,464,901 + +0.7 1,464,905 + -0.5 1,464,905 + -0.1 1,464,906 - -0.3 1,464,906 - -0.5 1,464,906 - +0.7 1,464,910 - -0.5 1,464,910 - +0.3 1,464,916 + -0.3 1,465,025 - CA264_06295 0.18 -0.2 1,465,033 - CA264_06295 0.20 -0.4 1,465,098 + CA264_06295 0.30 -2.3 1,465,191 + CA264_06295 0.45 +0.7 1,465,191 + CA264_06295 0.45 -2.0 1,465,191 + CA264_06295 0.45 -0.9 1,465,191 + CA264_06295 0.45 -0.6 1,465,192 - CA264_06295 0.45 -0.2 1,465,192 - CA264_06295 0.45 -1.0 1,465,192 - CA264_06295 0.45 +0.1 1,465,192 - CA264_06295 0.45 -0.0 1,465,197 + CA264_06295 0.46 -0.0 1,465,197 + CA264_06295 0.46 -1.4 1,465,211 - CA264_06295 0.48 -0.4 1,465,211 - CA264_06295 0.48 -0.5 1,465,294 + CA264_06295 0.62 -0.6 1,465,294 + CA264_06295 0.62 -0.7 1,465,295 - CA264_06295 0.62 -0.2 1,465,300 - CA264_06295 0.62 +0.3 1,465,305 + CA264_06295 0.63 -0.1 1,465,306 - CA264_06295 0.63 -0.1 1,465,543 - +0.5 1,465,612 - -1.6
Or see this region's nucleotide sequence