Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_05595

Experiment: m.b. Chlorite 0.08 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_05590 and CA264_05595 overlap by 35 nucleotidesCA264_05595 and CA264_05600 are separated by 109 nucleotidesCA264_05600 and CA264_05605 are separated by 169 nucleotides CA264_05590: CA264_05590 - hypothetical protein, at 1,300,278 to 1,301,576 _05590 CA264_05595: CA264_05595 - septum formation protein Maf, at 1,301,542 to 1,302,123 _05595 CA264_05600: CA264_05600 - hypothetical protein, at 1,302,233 to 1,302,754 _05600 CA264_05605: CA264_05605 - RlmI/RlmK family 23S rRNA methyltransferase, at 1,302,924 to 1,304,108 _05605 Position (kb) 1301 1302 1303Strain fitness (log2 ratio) -2 -1 0 1 2 3at 1300.597 kb on + strand, within CA264_05590at 1300.598 kb on - strand, within CA264_05590at 1300.606 kb on - strand, within CA264_05590at 1300.752 kb on + strand, within CA264_05590at 1300.752 kb on + strand, within CA264_05590at 1300.752 kb on + strand, within CA264_05590at 1301.352 kb on + strand, within CA264_05590at 1301.621 kb on - strand, within CA264_05595at 1301.690 kb on - strand, within CA264_05595at 1301.716 kb on + strand, within CA264_05595at 1301.718 kb on + strand, within CA264_05595at 1301.718 kb on + strand, within CA264_05595at 1301.718 kb on + strand, within CA264_05595at 1301.719 kb on - strand, within CA264_05595at 1301.948 kb on + strand, within CA264_05595at 1301.956 kb on + strand, within CA264_05595at 1301.968 kb on + strand, within CA264_05595at 1302.049 kb on + strand, within CA264_05595at 1302.050 kb on - strand, within CA264_05595at 1302.185 kb on + strandat 1302.213 kb on + strandat 1302.213 kb on + strandat 1302.216 kb on - strandat 1302.316 kb on - strand, within CA264_05600at 1302.341 kb on - strand, within CA264_05600at 1302.341 kb on - strand, within CA264_05600at 1302.367 kb on + strand, within CA264_05600at 1302.432 kb on + strand, within CA264_05600at 1302.459 kb on + strand, within CA264_05600at 1302.459 kb on + strand, within CA264_05600at 1302.459 kb on + strand, within CA264_05600at 1302.460 kb on - strand, within CA264_05600at 1302.500 kb on - strand, within CA264_05600at 1302.503 kb on + strand, within CA264_05600at 1302.503 kb on + strand, within CA264_05600at 1302.506 kb on + strand, within CA264_05600at 1302.506 kb on + strand, within CA264_05600at 1302.506 kb on + strand, within CA264_05600at 1302.507 kb on - strand, within CA264_05600at 1302.507 kb on - strand, within CA264_05600at 1302.507 kb on - strand, within CA264_05600at 1302.507 kb on - strand, within CA264_05600at 1302.559 kb on - strand, within CA264_05600at 1302.571 kb on + strand, within CA264_05600at 1302.572 kb on - strand, within CA264_05600at 1302.619 kb on + strand, within CA264_05600at 1302.620 kb on - strand, within CA264_05600at 1302.647 kb on - strand, within CA264_05600at 1302.647 kb on - strand, within CA264_05600at 1302.655 kb on + strand, within CA264_05600at 1302.688 kb on + strand, within CA264_05600at 1302.689 kb on - strand, within CA264_05600at 1302.692 kb on - strand, within CA264_05600at 1302.723 kb on + strandat 1302.723 kb on + strandat 1302.752 kb on + strandat 1302.759 kb on + strandat 1302.795 kb on + strandat 1302.855 kb on + strandat 1302.856 kb on - strandat 1302.856 kb on - strandat 1302.932 kb on + strandat 1302.940 kb on + strandat 1302.941 kb on - strandat 1302.942 kb on + strandat 1302.943 kb on - strandat 1303.042 kb on + strandat 1303.042 kb on + strandat 1303.045 kb on + strand, within CA264_05605at 1303.076 kb on - strand, within CA264_05605

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chlorite 0.08 mM
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1,300,597 + CA264_05590 0.25 -1.0
1,300,598 - CA264_05590 0.25 -1.6
1,300,606 - CA264_05590 0.25 -1.4
1,300,752 + CA264_05590 0.36 -1.0
1,300,752 + CA264_05590 0.36 -1.7
1,300,752 + CA264_05590 0.36 -0.6
1,301,352 + CA264_05590 0.83 -1.2
1,301,621 - CA264_05595 0.14 +0.5
1,301,690 - CA264_05595 0.25 +2.0
1,301,716 + CA264_05595 0.30 -0.1
1,301,718 + CA264_05595 0.30 +0.2
1,301,718 + CA264_05595 0.30 -0.1
1,301,718 + CA264_05595 0.30 +1.1
1,301,719 - CA264_05595 0.30 +0.6
1,301,948 + CA264_05595 0.70 +0.1
1,301,956 + CA264_05595 0.71 +0.3
1,301,968 + CA264_05595 0.73 +0.6
1,302,049 + CA264_05595 0.87 -0.3
1,302,050 - CA264_05595 0.87 -0.2
1,302,185 + -0.2
1,302,213 + -0.2
1,302,213 + -1.2
1,302,216 - +0.3
1,302,316 - CA264_05600 0.16 +0.1
1,302,341 - CA264_05600 0.21 -0.4
1,302,341 - CA264_05600 0.21 +0.4
1,302,367 + CA264_05600 0.26 -1.2
1,302,432 + CA264_05600 0.38 -0.0
1,302,459 + CA264_05600 0.43 -0.1
1,302,459 + CA264_05600 0.43 +0.0
1,302,459 + CA264_05600 0.43 +0.2
1,302,460 - CA264_05600 0.43 -0.4
1,302,500 - CA264_05600 0.51 -0.4
1,302,503 + CA264_05600 0.52 -0.0
1,302,503 + CA264_05600 0.52 -0.3
1,302,506 + CA264_05600 0.52 -0.3
1,302,506 + CA264_05600 0.52 -0.7
1,302,506 + CA264_05600 0.52 -0.2
1,302,507 - CA264_05600 0.52 +0.3
1,302,507 - CA264_05600 0.52 +0.4
1,302,507 - CA264_05600 0.52 -0.6
1,302,507 - CA264_05600 0.52 -0.0
1,302,559 - CA264_05600 0.62 +0.4
1,302,571 + CA264_05600 0.65 +0.2
1,302,572 - CA264_05600 0.65 -0.1
1,302,619 + CA264_05600 0.74 -0.2
1,302,620 - CA264_05600 0.74 -0.2
1,302,647 - CA264_05600 0.79 +0.4
1,302,647 - CA264_05600 0.79 -1.8
1,302,655 + CA264_05600 0.81 -0.6
1,302,688 + CA264_05600 0.87 -0.0
1,302,689 - CA264_05600 0.87 +0.1
1,302,692 - CA264_05600 0.88 +0.0
1,302,723 + -0.1
1,302,723 + +0.2
1,302,752 + +3.5
1,302,759 + -0.2
1,302,795 + +0.2
1,302,855 + -0.0
1,302,856 - -0.5
1,302,856 - +0.1
1,302,932 + +0.3
1,302,940 + +0.9
1,302,941 - +0.7
1,302,942 + -0.1
1,302,943 - +0.4
1,303,042 + +0.0
1,303,042 + +0.3
1,303,045 + CA264_05605 0.10 -0.1
1,303,076 - CA264_05605 0.13 +0.7

Or see this region's nucleotide sequence