Experiment: m.b. Chlorite 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_05590 and CA264_05595 overlap by 35 nucleotides CA264_05595 and CA264_05600 are separated by 109 nucleotides CA264_05600 and CA264_05605 are separated by 169 nucleotides
CA264_05590: CA264_05590 - hypothetical protein, at 1,300,278 to 1,301,576
_05590
CA264_05595: CA264_05595 - septum formation protein Maf, at 1,301,542 to 1,302,123
_05595
CA264_05600: CA264_05600 - hypothetical protein, at 1,302,233 to 1,302,754
_05600
CA264_05605: CA264_05605 - RlmI/RlmK family 23S rRNA methyltransferase, at 1,302,924 to 1,304,108
_05605
Position (kb)
1301
1302
1303 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1300.597 kb on + strand, within CA264_05590 at 1300.598 kb on - strand, within CA264_05590 at 1300.606 kb on - strand, within CA264_05590 at 1300.752 kb on + strand, within CA264_05590 at 1300.752 kb on + strand, within CA264_05590 at 1300.752 kb on + strand, within CA264_05590 at 1301.352 kb on + strand, within CA264_05590 at 1301.621 kb on - strand, within CA264_05595 at 1301.690 kb on - strand, within CA264_05595 at 1301.716 kb on + strand, within CA264_05595 at 1301.718 kb on + strand, within CA264_05595 at 1301.718 kb on + strand, within CA264_05595 at 1301.718 kb on + strand, within CA264_05595 at 1301.719 kb on - strand, within CA264_05595 at 1301.948 kb on + strand, within CA264_05595 at 1301.956 kb on + strand, within CA264_05595 at 1301.968 kb on + strand, within CA264_05595 at 1302.049 kb on + strand, within CA264_05595 at 1302.050 kb on - strand, within CA264_05595 at 1302.185 kb on + strand at 1302.213 kb on + strand at 1302.213 kb on + strand at 1302.216 kb on - strand at 1302.316 kb on - strand, within CA264_05600 at 1302.341 kb on - strand, within CA264_05600 at 1302.341 kb on - strand, within CA264_05600 at 1302.367 kb on + strand, within CA264_05600 at 1302.432 kb on + strand, within CA264_05600 at 1302.459 kb on + strand, within CA264_05600 at 1302.459 kb on + strand, within CA264_05600 at 1302.459 kb on + strand, within CA264_05600 at 1302.460 kb on - strand, within CA264_05600 at 1302.500 kb on - strand, within CA264_05600 at 1302.503 kb on + strand, within CA264_05600 at 1302.503 kb on + strand, within CA264_05600 at 1302.506 kb on + strand, within CA264_05600 at 1302.506 kb on + strand, within CA264_05600 at 1302.506 kb on + strand, within CA264_05600 at 1302.507 kb on - strand, within CA264_05600 at 1302.507 kb on - strand, within CA264_05600 at 1302.507 kb on - strand, within CA264_05600 at 1302.507 kb on - strand, within CA264_05600 at 1302.559 kb on - strand, within CA264_05600 at 1302.571 kb on + strand, within CA264_05600 at 1302.572 kb on - strand, within CA264_05600 at 1302.619 kb on + strand, within CA264_05600 at 1302.620 kb on - strand, within CA264_05600 at 1302.647 kb on - strand, within CA264_05600 at 1302.647 kb on - strand, within CA264_05600 at 1302.655 kb on + strand, within CA264_05600 at 1302.688 kb on + strand, within CA264_05600 at 1302.689 kb on - strand, within CA264_05600 at 1302.692 kb on - strand, within CA264_05600 at 1302.723 kb on + strand at 1302.723 kb on + strand at 1302.752 kb on + strand at 1302.759 kb on + strand at 1302.795 kb on + strand at 1302.855 kb on + strand at 1302.856 kb on - strand at 1302.856 kb on - strand at 1302.932 kb on + strand at 1302.940 kb on + strand at 1302.941 kb on - strand at 1302.942 kb on + strand at 1302.943 kb on - strand at 1303.042 kb on + strand at 1303.042 kb on + strand at 1303.045 kb on + strand, within CA264_05605 at 1303.076 kb on - strand, within CA264_05605
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.08 mM remove 1,300,597 + CA264_05590 0.25 -1.0 1,300,598 - CA264_05590 0.25 -1.6 1,300,606 - CA264_05590 0.25 -1.4 1,300,752 + CA264_05590 0.36 -1.0 1,300,752 + CA264_05590 0.36 -1.7 1,300,752 + CA264_05590 0.36 -0.6 1,301,352 + CA264_05590 0.83 -1.2 1,301,621 - CA264_05595 0.14 +0.5 1,301,690 - CA264_05595 0.25 +2.0 1,301,716 + CA264_05595 0.30 -0.1 1,301,718 + CA264_05595 0.30 +0.2 1,301,718 + CA264_05595 0.30 -0.1 1,301,718 + CA264_05595 0.30 +1.1 1,301,719 - CA264_05595 0.30 +0.6 1,301,948 + CA264_05595 0.70 +0.1 1,301,956 + CA264_05595 0.71 +0.3 1,301,968 + CA264_05595 0.73 +0.6 1,302,049 + CA264_05595 0.87 -0.3 1,302,050 - CA264_05595 0.87 -0.2 1,302,185 + -0.2 1,302,213 + -0.2 1,302,213 + -1.2 1,302,216 - +0.3 1,302,316 - CA264_05600 0.16 +0.1 1,302,341 - CA264_05600 0.21 -0.4 1,302,341 - CA264_05600 0.21 +0.4 1,302,367 + CA264_05600 0.26 -1.2 1,302,432 + CA264_05600 0.38 -0.0 1,302,459 + CA264_05600 0.43 -0.1 1,302,459 + CA264_05600 0.43 +0.0 1,302,459 + CA264_05600 0.43 +0.2 1,302,460 - CA264_05600 0.43 -0.4 1,302,500 - CA264_05600 0.51 -0.4 1,302,503 + CA264_05600 0.52 -0.0 1,302,503 + CA264_05600 0.52 -0.3 1,302,506 + CA264_05600 0.52 -0.3 1,302,506 + CA264_05600 0.52 -0.7 1,302,506 + CA264_05600 0.52 -0.2 1,302,507 - CA264_05600 0.52 +0.3 1,302,507 - CA264_05600 0.52 +0.4 1,302,507 - CA264_05600 0.52 -0.6 1,302,507 - CA264_05600 0.52 -0.0 1,302,559 - CA264_05600 0.62 +0.4 1,302,571 + CA264_05600 0.65 +0.2 1,302,572 - CA264_05600 0.65 -0.1 1,302,619 + CA264_05600 0.74 -0.2 1,302,620 - CA264_05600 0.74 -0.2 1,302,647 - CA264_05600 0.79 +0.4 1,302,647 - CA264_05600 0.79 -1.8 1,302,655 + CA264_05600 0.81 -0.6 1,302,688 + CA264_05600 0.87 -0.0 1,302,689 - CA264_05600 0.87 +0.1 1,302,692 - CA264_05600 0.88 +0.0 1,302,723 + -0.1 1,302,723 + +0.2 1,302,752 + +3.5 1,302,759 + -0.2 1,302,795 + +0.2 1,302,855 + -0.0 1,302,856 - -0.5 1,302,856 - +0.1 1,302,932 + +0.3 1,302,940 + +0.9 1,302,941 - +0.7 1,302,942 + -0.1 1,302,943 - +0.4 1,303,042 + +0.0 1,303,042 + +0.3 1,303,045 + CA264_05605 0.10 -0.1 1,303,076 - CA264_05605 0.13 +0.7
Or see this region's nucleotide sequence