Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_02170

Experiment: m.b. Chlorite 0.08 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_02165 and CA264_02170 are separated by 144 nucleotidesCA264_02170 and CA264_02175 are separated by 320 nucleotides CA264_02165: CA264_02165 - dihydrolipoyl dehydrogenase, at 498,496 to 499,890 _02165 CA264_02170: CA264_02170 - hypothetical protein, at 500,035 to 500,799 _02170 CA264_02175: CA264_02175 - acyl-CoA desaturase, at 501,120 to 502,232 _02175 Position (kb) 500 501Strain fitness (log2 ratio) -2 -1 0 1at 499.888 kb on + strandat 499.888 kb on + strandat 499.888 kb on + strandat 499.889 kb on - strandat 499.914 kb on - strandat 499.953 kb on + strandat 500.022 kb on - strandat 500.027 kb on + strandat 500.027 kb on + strandat 500.028 kb on - strandat 500.028 kb on - strandat 500.029 kb on + strandat 500.029 kb on + strandat 500.029 kb on + strandat 500.029 kb on + strandat 500.030 kb on - strandat 500.035 kb on - strandat 500.055 kb on - strandat 500.244 kb on + strand, within CA264_02170at 500.245 kb on - strand, within CA264_02170at 500.347 kb on + strand, within CA264_02170at 500.527 kb on - strand, within CA264_02170at 500.527 kb on - strand, within CA264_02170at 500.533 kb on + strand, within CA264_02170at 500.549 kb on - strand, within CA264_02170at 500.587 kb on + strand, within CA264_02170at 500.588 kb on - strand, within CA264_02170at 500.632 kb on + strand, within CA264_02170at 500.632 kb on + strand, within CA264_02170at 500.662 kb on + strand, within CA264_02170at 500.662 kb on + strand, within CA264_02170at 500.663 kb on - strand, within CA264_02170at 500.684 kb on - strand, within CA264_02170at 500.765 kb on + strandat 500.766 kb on - strandat 500.889 kb on + strandat 500.900 kb on + strandat 500.904 kb on + strandat 500.905 kb on - strandat 500.937 kb on + strandat 500.941 kb on + strandat 500.942 kb on - strandat 500.943 kb on + strandat 500.951 kb on + strandat 500.958 kb on + strandat 500.971 kb on - strandat 500.977 kb on - strandat 500.977 kb on - strandat 501.070 kb on + strandat 501.107 kb on + strandat 501.107 kb on + strandat 501.107 kb on + strandat 501.108 kb on - strandat 501.119 kb on + strandat 501.120 kb on - strandat 501.120 kb on - strandat 501.128 kb on - strandat 501.139 kb on + strandat 501.140 kb on - strandat 501.201 kb on + strandat 501.202 kb on - strandat 501.202 kb on - strandat 501.276 kb on + strand, within CA264_02175at 501.330 kb on - strand, within CA264_02175at 501.347 kb on + strand, within CA264_02175at 501.348 kb on - strand, within CA264_02175at 501.409 kb on - strand, within CA264_02175at 501.427 kb on + strand, within CA264_02175at 501.427 kb on + strand, within CA264_02175at 501.432 kb on + strand, within CA264_02175at 501.432 kb on + strand, within CA264_02175at 501.494 kb on + strand, within CA264_02175at 501.494 kb on + strand, within CA264_02175at 501.495 kb on - strand, within CA264_02175at 501.495 kb on - strand, within CA264_02175at 501.495 kb on - strand, within CA264_02175at 501.513 kb on + strand, within CA264_02175at 501.513 kb on + strand, within CA264_02175at 501.513 kb on + strand, within CA264_02175at 501.513 kb on + strand, within CA264_02175at 501.516 kb on - strand, within CA264_02175at 501.516 kb on - strand, within CA264_02175at 501.516 kb on - strand, within CA264_02175at 501.516 kb on - strand, within CA264_02175at 501.594 kb on + strand, within CA264_02175at 501.594 kb on + strand, within CA264_02175at 501.595 kb on - strand, within CA264_02175at 501.616 kb on - strand, within CA264_02175at 501.630 kb on + strand, within CA264_02175at 501.649 kb on - strand, within CA264_02175at 501.678 kb on + strand, within CA264_02175at 501.704 kb on - strand, within CA264_02175at 501.704 kb on - strand, within CA264_02175at 501.768 kb on + strand, within CA264_02175at 501.769 kb on - strand, within CA264_02175at 501.769 kb on - strand, within CA264_02175

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chlorite 0.08 mM
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499,888 + -0.2
499,888 + +0.6
499,888 + -0.6
499,889 - -0.2
499,914 - -0.4
499,953 + -1.0
500,022 - -0.6
500,027 + -0.7
500,027 + -0.9
500,028 - +0.2
500,028 - -0.2
500,029 + -0.2
500,029 + +1.0
500,029 + -0.1
500,029 + -0.2
500,030 - -0.2
500,035 - -0.1
500,055 - +0.2
500,244 + CA264_02170 0.27 -0.9
500,245 - CA264_02170 0.27 -0.7
500,347 + CA264_02170 0.41 +0.9
500,527 - CA264_02170 0.64 -1.1
500,527 - CA264_02170 0.64 +0.6
500,533 + CA264_02170 0.65 +0.9
500,549 - CA264_02170 0.67 +0.1
500,587 + CA264_02170 0.72 +1.1
500,588 - CA264_02170 0.72 +0.5
500,632 + CA264_02170 0.78 +0.6
500,632 + CA264_02170 0.78 +1.3
500,662 + CA264_02170 0.82 -0.2
500,662 + CA264_02170 0.82 -0.4
500,663 - CA264_02170 0.82 +1.6
500,684 - CA264_02170 0.85 +0.3
500,765 + -0.1
500,766 - +0.4
500,889 + +0.4
500,900 + -0.3
500,904 + +0.1
500,905 - -0.3
500,937 + -0.0
500,941 + -0.5
500,942 - -0.2
500,943 + -0.7
500,951 + -0.5
500,958 + -1.6
500,971 - +0.2
500,977 - -0.4
500,977 - +0.0
501,070 + -0.3
501,107 + -0.9
501,107 + -0.2
501,107 + +0.1
501,108 - +0.1
501,119 + -0.4
501,120 - -0.2
501,120 - -0.2
501,128 - -0.4
501,139 + -0.6
501,140 - -0.6
501,201 + -0.2
501,202 - -0.4
501,202 - -0.3
501,276 + CA264_02175 0.14 -0.5
501,330 - CA264_02175 0.19 -0.4
501,347 + CA264_02175 0.20 -0.7
501,348 - CA264_02175 0.20 +0.5
501,409 - CA264_02175 0.26 -0.1
501,427 + CA264_02175 0.28 -0.1
501,427 + CA264_02175 0.28 +0.6
501,432 + CA264_02175 0.28 +1.2
501,432 + CA264_02175 0.28 +0.1
501,494 + CA264_02175 0.34 +0.5
501,494 + CA264_02175 0.34 +1.2
501,495 - CA264_02175 0.34 -2.2
501,495 - CA264_02175 0.34 +1.2
501,495 - CA264_02175 0.34 -0.3
501,513 + CA264_02175 0.35 +0.4
501,513 + CA264_02175 0.35 -0.1
501,513 + CA264_02175 0.35 +0.1
501,513 + CA264_02175 0.35 +0.4
501,516 - CA264_02175 0.36 +0.0
501,516 - CA264_02175 0.36 -0.2
501,516 - CA264_02175 0.36 +0.2
501,516 - CA264_02175 0.36 -0.8
501,594 + CA264_02175 0.43 -0.3
501,594 + CA264_02175 0.43 +0.3
501,595 - CA264_02175 0.43 -0.2
501,616 - CA264_02175 0.45 -0.8
501,630 + CA264_02175 0.46 +0.1
501,649 - CA264_02175 0.48 +0.3
501,678 + CA264_02175 0.50 -0.2
501,704 - CA264_02175 0.52 +0.3
501,704 - CA264_02175 0.52 +1.1
501,768 + CA264_02175 0.58 +0.8
501,769 - CA264_02175 0.58 -0.2
501,769 - CA264_02175 0.58 +0.1

Or see this region's nucleotide sequence