Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_00695

Experiment: m.b. Chlorite 0.08 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_00690 and CA264_00695 are separated by 1 nucleotidesCA264_00695 and CA264_00700 overlap by 1 nucleotidesCA264_00700 and CA264_00705 are separated by 142 nucleotides CA264_00690: CA264_00690 - hypothetical protein, at 150,486 to 151,487 _00690 CA264_00695: CA264_00695 - cytochrome-c peroxidase, at 151,489 to 152,562 _00695 CA264_00700: CA264_00700 - hypothetical protein, at 152,562 to 153,335 _00700 CA264_00705: CA264_00705 - hypothetical protein, at 153,478 to 153,810 _00705 Position (kb) 151 152 153Strain fitness (log2 ratio) -2 -1 0 1 2at 150.508 kb on - strandat 150.571 kb on + strandat 150.692 kb on - strand, within CA264_00690at 150.695 kb on - strand, within CA264_00690at 150.760 kb on + strand, within CA264_00690at 150.765 kb on - strand, within CA264_00690at 150.822 kb on - strand, within CA264_00690at 150.862 kb on + strand, within CA264_00690at 150.867 kb on + strand, within CA264_00690at 150.868 kb on - strand, within CA264_00690at 150.881 kb on - strand, within CA264_00690at 150.881 kb on - strand, within CA264_00690at 150.968 kb on + strand, within CA264_00690at 150.969 kb on - strand, within CA264_00690at 150.969 kb on - strand, within CA264_00690at 151.014 kb on - strand, within CA264_00690at 151.019 kb on + strand, within CA264_00690at 151.115 kb on - strand, within CA264_00690at 151.117 kb on + strand, within CA264_00690at 151.118 kb on - strand, within CA264_00690at 151.158 kb on + strand, within CA264_00690at 151.381 kb on + strand, within CA264_00690at 151.382 kb on - strand, within CA264_00690at 151.438 kb on - strandat 151.522 kb on - strandat 151.522 kb on - strandat 151.538 kb on - strandat 151.706 kb on + strand, within CA264_00695at 151.706 kb on + strand, within CA264_00695at 151.707 kb on - strand, within CA264_00695at 151.707 kb on - strand, within CA264_00695at 151.747 kb on - strand, within CA264_00695at 151.749 kb on - strand, within CA264_00695at 151.777 kb on - strand, within CA264_00695at 151.919 kb on - strand, within CA264_00695at 151.961 kb on + strand, within CA264_00695at 151.989 kb on + strand, within CA264_00695at 151.989 kb on + strand, within CA264_00695at 151.989 kb on + strand, within CA264_00695at 152.260 kb on + strand, within CA264_00695at 152.397 kb on + strand, within CA264_00695at 152.398 kb on - strand, within CA264_00695at 152.503 kb on - strandat 152.542 kb on + strandat 152.543 kb on - strandat 152.563 kb on + strandat 152.592 kb on + strandat 152.603 kb on - strandat 152.604 kb on - strandat 152.611 kb on + strandat 152.612 kb on - strandat 152.669 kb on + strand, within CA264_00700at 152.679 kb on + strand, within CA264_00700at 152.680 kb on - strand, within CA264_00700at 152.680 kb on - strand, within CA264_00700at 152.680 kb on - strand, within CA264_00700at 152.680 kb on - strand, within CA264_00700at 152.748 kb on + strand, within CA264_00700at 152.749 kb on - strand, within CA264_00700at 152.805 kb on + strand, within CA264_00700at 152.805 kb on + strand, within CA264_00700at 152.805 kb on + strand, within CA264_00700at 152.806 kb on - strand, within CA264_00700at 152.806 kb on - strand, within CA264_00700at 152.813 kb on - strand, within CA264_00700at 152.819 kb on - strand, within CA264_00700at 152.819 kb on - strand, within CA264_00700at 152.819 kb on - strand, within CA264_00700at 152.819 kb on - strand, within CA264_00700at 152.870 kb on + strand, within CA264_00700at 152.878 kb on + strand, within CA264_00700at 152.940 kb on + strand, within CA264_00700at 152.940 kb on + strand, within CA264_00700at 153.061 kb on + strand, within CA264_00700at 153.083 kb on - strand, within CA264_00700at 153.105 kb on - strand, within CA264_00700at 153.105 kb on - strand, within CA264_00700at 153.128 kb on - strand, within CA264_00700at 153.173 kb on - strand, within CA264_00700at 153.173 kb on - strand, within CA264_00700at 153.205 kb on + strand, within CA264_00700at 153.205 kb on + strand, within CA264_00700at 153.205 kb on + strand, within CA264_00700at 153.205 kb on + strand, within CA264_00700at 153.206 kb on - strand, within CA264_00700at 153.206 kb on - strand, within CA264_00700at 153.217 kb on - strand, within CA264_00700at 153.217 kb on - strand, within CA264_00700at 153.217 kb on - strand, within CA264_00700at 153.218 kb on + strand, within CA264_00700at 153.300 kb on + strandat 153.300 kb on + strandat 153.300 kb on + strandat 153.301 kb on - strandat 153.303 kb on + strandat 153.304 kb on - strandat 153.304 kb on - strandat 153.312 kb on + strandat 153.312 kb on + strandat 153.313 kb on - strandat 153.313 kb on - strandat 153.363 kb on + strandat 153.363 kb on + strandat 153.364 kb on - strandat 153.378 kb on - strandat 153.379 kb on + strandat 153.386 kb on + strandat 153.387 kb on - strandat 153.390 kb on + strandat 153.390 kb on + strandat 153.390 kb on + strandat 153.390 kb on + strandat 153.391 kb on - strandat 153.393 kb on - strandat 153.422 kb on - strandat 153.423 kb on + strandat 153.424 kb on - strandat 153.424 kb on - strandat 153.468 kb on + strandat 153.469 kb on - strandat 153.469 kb on - strandat 153.479 kb on + strandat 153.479 kb on + strandat 153.479 kb on + strandat 153.479 kb on + strandat 153.479 kb on + strandat 153.480 kb on - strandat 153.480 kb on - strandat 153.480 kb on - strandat 153.482 kb on - strandat 153.512 kb on + strand, within CA264_00705at 153.513 kb on - strand, within CA264_00705

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chlorite 0.08 mM
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150,508 - -0.0
150,571 + -1.9
150,692 - CA264_00690 0.21 +0.3
150,695 - CA264_00690 0.21 +0.0
150,760 + CA264_00690 0.27 +0.1
150,765 - CA264_00690 0.28 -0.0
150,822 - CA264_00690 0.34 -0.4
150,862 + CA264_00690 0.38 -0.9
150,867 + CA264_00690 0.38 -0.1
150,868 - CA264_00690 0.38 -0.7
150,881 - CA264_00690 0.39 -0.4
150,881 - CA264_00690 0.39 +0.3
150,968 + CA264_00690 0.48 -0.9
150,969 - CA264_00690 0.48 -0.4
150,969 - CA264_00690 0.48 -0.7
151,014 - CA264_00690 0.53 +1.3
151,019 + CA264_00690 0.53 +0.7
151,115 - CA264_00690 0.63 -1.7
151,117 + CA264_00690 0.63 +0.2
151,118 - CA264_00690 0.63 +0.0
151,158 + CA264_00690 0.67 -0.4
151,381 + CA264_00690 0.89 +0.3
151,382 - CA264_00690 0.89 -2.1
151,438 - +0.7
151,522 - -0.2
151,522 - +0.2
151,538 - -0.2
151,706 + CA264_00695 0.20 -0.0
151,706 + CA264_00695 0.20 +0.2
151,707 - CA264_00695 0.20 -0.2
151,707 - CA264_00695 0.20 +0.3
151,747 - CA264_00695 0.24 +1.1
151,749 - CA264_00695 0.24 -0.4
151,777 - CA264_00695 0.27 +1.0
151,919 - CA264_00695 0.40 -0.6
151,961 + CA264_00695 0.44 -0.2
151,989 + CA264_00695 0.47 +0.3
151,989 + CA264_00695 0.47 -0.2
151,989 + CA264_00695 0.47 +1.0
152,260 + CA264_00695 0.72 +0.6
152,397 + CA264_00695 0.85 +0.1
152,398 - CA264_00695 0.85 +0.4
152,503 - -0.5
152,542 + +0.2
152,543 - +1.1
152,563 + -0.3
152,592 + -0.1
152,603 - -0.1
152,604 - +0.1
152,611 + +0.8
152,612 - +0.2
152,669 + CA264_00700 0.14 -0.4
152,679 + CA264_00700 0.15 +0.1
152,680 - CA264_00700 0.15 +0.5
152,680 - CA264_00700 0.15 +0.1
152,680 - CA264_00700 0.15 +0.4
152,680 - CA264_00700 0.15 +0.1
152,748 + CA264_00700 0.24 -0.0
152,749 - CA264_00700 0.24 +0.5
152,805 + CA264_00700 0.31 +1.7
152,805 + CA264_00700 0.31 -0.1
152,805 + CA264_00700 0.31 -0.0
152,806 - CA264_00700 0.32 -0.9
152,806 - CA264_00700 0.32 +0.3
152,813 - CA264_00700 0.32 -0.2
152,819 - CA264_00700 0.33 +0.2
152,819 - CA264_00700 0.33 +1.1
152,819 - CA264_00700 0.33 +1.0
152,819 - CA264_00700 0.33 -0.2
152,870 + CA264_00700 0.40 -0.1
152,878 + CA264_00700 0.41 -0.2
152,940 + CA264_00700 0.49 +0.1
152,940 + CA264_00700 0.49 -0.2
153,061 + CA264_00700 0.64 +1.1
153,083 - CA264_00700 0.67 -0.3
153,105 - CA264_00700 0.70 -0.8
153,105 - CA264_00700 0.70 -0.9
153,128 - CA264_00700 0.73 +0.3
153,173 - CA264_00700 0.79 +0.4
153,173 - CA264_00700 0.79 -0.5
153,205 + CA264_00700 0.83 -0.6
153,205 + CA264_00700 0.83 +1.8
153,205 + CA264_00700 0.83 -0.1
153,205 + CA264_00700 0.83 -0.7
153,206 - CA264_00700 0.83 -0.3
153,206 - CA264_00700 0.83 -0.9
153,217 - CA264_00700 0.85 +0.4
153,217 - CA264_00700 0.85 -0.1
153,217 - CA264_00700 0.85 +1.3
153,218 + CA264_00700 0.85 +1.0
153,300 + -0.2
153,300 + -0.5
153,300 + -0.1
153,301 - -0.1
153,303 + +0.8
153,304 - -0.2
153,304 - -0.4
153,312 + -1.4
153,312 + -0.5
153,313 - -0.1
153,313 - -0.5
153,363 + +1.4
153,363 + +0.8
153,364 - +0.3
153,378 - +2.4
153,379 + -0.7
153,386 + -0.6
153,387 - -1.1
153,390 + -0.7
153,390 + +0.3
153,390 + -0.5
153,390 + -0.4
153,391 - -0.1
153,393 - -0.5
153,422 - -0.0
153,423 + +0.4
153,424 - -0.5
153,424 - -0.6
153,468 + +0.1
153,469 - -0.6
153,469 - -0.3
153,479 + -0.1
153,479 + +0.0
153,479 + +0.4
153,479 + -0.1
153,479 + +0.5
153,480 - -1.8
153,480 - -0.2
153,480 - +0.6
153,482 - +0.4
153,512 + CA264_00705 0.10 +0.2
153,513 - CA264_00705 0.11 -0.8

Or see this region's nucleotide sequence