Strain Fitness in Bosea sp. OAE506 around ABIE41_RS03470

Experiment: Fumarate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABIE41_RS03465 and ABIE41_RS03470 are separated by 111 nucleotidesABIE41_RS03470 and ABIE41_RS03475 are separated by 36 nucleotides ABIE41_RS03465: ABIE41_RS03465 - sn-glycerol-3-phosphate import ATP-binding protein UgpC, at 720,400 to 721,479 _RS03465 ABIE41_RS03470: ABIE41_RS03470 - thioredoxin family protein, at 721,591 to 722,232 _RS03470 ABIE41_RS03475: ABIE41_RS03475 - protein-disulfide reductase DsbD domain-containing protein, at 722,269 to 724,425 _RS03475 Position (kb) 721 722 723Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 720.661 kb on + strand, within ABIE41_RS03465at 720.661 kb on + strand, within ABIE41_RS03465at 720.661 kb on + strand, within ABIE41_RS03465at 720.669 kb on + strand, within ABIE41_RS03465at 720.669 kb on + strand, within ABIE41_RS03465at 720.669 kb on + strand, within ABIE41_RS03465at 720.670 kb on - strand, within ABIE41_RS03465at 720.670 kb on - strand, within ABIE41_RS03465at 720.670 kb on - strand, within ABIE41_RS03465at 720.670 kb on - strand, within ABIE41_RS03465at 720.670 kb on - strand, within ABIE41_RS03465at 720.670 kb on - strand, within ABIE41_RS03465at 720.679 kb on + strand, within ABIE41_RS03465at 720.679 kb on + strand, within ABIE41_RS03465at 720.694 kb on + strand, within ABIE41_RS03465at 720.695 kb on - strand, within ABIE41_RS03465at 720.695 kb on - strand, within ABIE41_RS03465at 720.695 kb on - strand, within ABIE41_RS03465at 720.695 kb on - strand, within ABIE41_RS03465at 720.967 kb on + strand, within ABIE41_RS03465at 720.967 kb on + strand, within ABIE41_RS03465at 720.967 kb on + strand, within ABIE41_RS03465at 720.967 kb on + strand, within ABIE41_RS03465at 720.968 kb on - strand, within ABIE41_RS03465at 720.968 kb on - strand, within ABIE41_RS03465at 721.066 kb on + strand, within ABIE41_RS03465at 721.066 kb on + strand, within ABIE41_RS03465at 721.067 kb on - strand, within ABIE41_RS03465at 721.067 kb on - strand, within ABIE41_RS03465at 721.067 kb on - strand, within ABIE41_RS03465at 721.067 kb on - strand, within ABIE41_RS03465at 721.067 kb on - strand, within ABIE41_RS03465at 721.091 kb on + strand, within ABIE41_RS03465at 721.092 kb on - strand, within ABIE41_RS03465at 721.092 kb on - strand, within ABIE41_RS03465at 721.625 kb on + strandat 721.625 kb on + strandat 721.625 kb on + strandat 721.626 kb on - strandat 721.626 kb on - strandat 721.626 kb on - strandat 721.665 kb on + strand, within ABIE41_RS03470at 721.666 kb on - strand, within ABIE41_RS03470at 721.691 kb on + strand, within ABIE41_RS03470at 721.691 kb on + strand, within ABIE41_RS03470at 721.691 kb on + strand, within ABIE41_RS03470at 721.691 kb on + strand, within ABIE41_RS03470at 721.691 kb on + strand, within ABIE41_RS03470at 721.691 kb on + strand, within ABIE41_RS03470at 721.691 kb on + strand, within ABIE41_RS03470at 721.691 kb on + strand, within ABIE41_RS03470at 721.691 kb on + strand, within ABIE41_RS03470at 721.692 kb on - strand, within ABIE41_RS03470at 721.692 kb on - strand, within ABIE41_RS03470at 721.692 kb on - strand, within ABIE41_RS03470at 721.692 kb on - strand, within ABIE41_RS03470at 721.692 kb on - strand, within ABIE41_RS03470at 721.692 kb on - strand, within ABIE41_RS03470at 721.692 kb on - strand, within ABIE41_RS03470at 721.752 kb on + strand, within ABIE41_RS03470at 721.752 kb on + strand, within ABIE41_RS03470at 721.752 kb on + strand, within ABIE41_RS03470at 721.753 kb on - strand, within ABIE41_RS03470at 721.754 kb on + strand, within ABIE41_RS03470at 721.754 kb on + strand, within ABIE41_RS03470at 721.755 kb on - strand, within ABIE41_RS03470at 721.755 kb on - strand, within ABIE41_RS03470at 721.755 kb on - strand, within ABIE41_RS03470at 721.755 kb on - strand, within ABIE41_RS03470at 721.784 kb on + strand, within ABIE41_RS03470at 721.784 kb on + strand, within ABIE41_RS03470at 721.784 kb on + strand, within ABIE41_RS03470at 721.784 kb on + strand, within ABIE41_RS03470at 721.784 kb on + strand, within ABIE41_RS03470at 721.784 kb on + strand, within ABIE41_RS03470at 721.784 kb on + strand, within ABIE41_RS03470at 721.784 kb on + strand, within ABIE41_RS03470at 721.784 kb on + strand, within ABIE41_RS03470at 721.784 kb on + strand, within ABIE41_RS03470at 721.784 kb on + strand, within ABIE41_RS03470at 721.784 kb on + strand, within ABIE41_RS03470at 721.785 kb on - strand, within ABIE41_RS03470at 721.785 kb on - strand, within ABIE41_RS03470at 721.785 kb on - strand, within ABIE41_RS03470at 721.785 kb on - strand, within ABIE41_RS03470at 721.785 kb on - strand, within ABIE41_RS03470at 721.785 kb on - strand, within ABIE41_RS03470at 721.785 kb on - strand, within ABIE41_RS03470at 721.785 kb on - strand, within ABIE41_RS03470at 722.003 kb on + strand, within ABIE41_RS03470at 722.003 kb on + strand, within ABIE41_RS03470at 722.003 kb on + strand, within ABIE41_RS03470at 722.004 kb on - strand, within ABIE41_RS03470at 722.004 kb on - strand, within ABIE41_RS03470at 722.004 kb on - strand, within ABIE41_RS03470at 722.018 kb on + strand, within ABIE41_RS03470at 722.018 kb on + strand, within ABIE41_RS03470at 722.019 kb on - strand, within ABIE41_RS03470at 722.019 kb on - strand, within ABIE41_RS03470at 722.019 kb on - strand, within ABIE41_RS03470at 722.019 kb on - strand, within ABIE41_RS03470at 722.019 kb on - strand, within ABIE41_RS03470at 722.019 kb on - strand, within ABIE41_RS03470at 722.019 kb on - strand, within ABIE41_RS03470at 722.019 kb on - strand, within ABIE41_RS03470

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Per-strain Table

Position Strand Gene LocusTag Fraction Fumarate (C)
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720,661 + ABIE41_RS03465 0.24 -0.6
720,661 + ABIE41_RS03465 0.24 -0.1
720,661 + ABIE41_RS03465 0.24 +0.3
720,669 + ABIE41_RS03465 0.25 +0.8
720,669 + ABIE41_RS03465 0.25 +0.8
720,669 + ABIE41_RS03465 0.25 -0.1
720,670 - ABIE41_RS03465 0.25 +0.8
720,670 - ABIE41_RS03465 0.25 +0.2
720,670 - ABIE41_RS03465 0.25 +0.3
720,670 - ABIE41_RS03465 0.25 +0.0
720,670 - ABIE41_RS03465 0.25 +0.4
720,670 - ABIE41_RS03465 0.25 -0.4
720,679 + ABIE41_RS03465 0.26 +0.3
720,679 + ABIE41_RS03465 0.26 +1.6
720,694 + ABIE41_RS03465 0.27 +1.0
720,695 - ABIE41_RS03465 0.27 -0.2
720,695 - ABIE41_RS03465 0.27 -0.6
720,695 - ABIE41_RS03465 0.27 -0.1
720,695 - ABIE41_RS03465 0.27 +0.5
720,967 + ABIE41_RS03465 0.53 -1.8
720,967 + ABIE41_RS03465 0.53 +0.7
720,967 + ABIE41_RS03465 0.53 +0.7
720,967 + ABIE41_RS03465 0.53 +0.5
720,968 - ABIE41_RS03465 0.53 -0.5
720,968 - ABIE41_RS03465 0.53 +0.2
721,066 + ABIE41_RS03465 0.62 +0.8
721,066 + ABIE41_RS03465 0.62 +0.7
721,067 - ABIE41_RS03465 0.62 -1.2
721,067 - ABIE41_RS03465 0.62 +0.3
721,067 - ABIE41_RS03465 0.62 +0.0
721,067 - ABIE41_RS03465 0.62 +0.7
721,067 - ABIE41_RS03465 0.62 +0.5
721,091 + ABIE41_RS03465 0.64 +1.0
721,092 - ABIE41_RS03465 0.64 -2.7
721,092 - ABIE41_RS03465 0.64 +0.1
721,625 + -1.4
721,625 + -0.7
721,625 + +0.6
721,626 - +0.4
721,626 - +0.6
721,626 - +0.6
721,665 + ABIE41_RS03470 0.12 -0.6
721,666 - ABIE41_RS03470 0.12 -0.8
721,691 + ABIE41_RS03470 0.16 +0.1
721,691 + ABIE41_RS03470 0.16 +0.1
721,691 + ABIE41_RS03470 0.16 +0.0
721,691 + ABIE41_RS03470 0.16 +0.1
721,691 + ABIE41_RS03470 0.16 +0.4
721,691 + ABIE41_RS03470 0.16 +0.4
721,691 + ABIE41_RS03470 0.16 -1.2
721,691 + ABIE41_RS03470 0.16 -2.3
721,691 + ABIE41_RS03470 0.16 +0.8
721,692 - ABIE41_RS03470 0.16 -0.4
721,692 - ABIE41_RS03470 0.16 -0.1
721,692 - ABIE41_RS03470 0.16 +1.1
721,692 - ABIE41_RS03470 0.16 +0.7
721,692 - ABIE41_RS03470 0.16 +2.5
721,692 - ABIE41_RS03470 0.16 +0.7
721,692 - ABIE41_RS03470 0.16 -2.0
721,752 + ABIE41_RS03470 0.25 -2.6
721,752 + ABIE41_RS03470 0.25 +0.0
721,752 + ABIE41_RS03470 0.25 -1.9
721,753 - ABIE41_RS03470 0.25 -0.5
721,754 + ABIE41_RS03470 0.25 +3.1
721,754 + ABIE41_RS03470 0.25 +0.3
721,755 - ABIE41_RS03470 0.26 -0.4
721,755 - ABIE41_RS03470 0.26 +1.0
721,755 - ABIE41_RS03470 0.26 -0.7
721,755 - ABIE41_RS03470 0.26 -0.1
721,784 + ABIE41_RS03470 0.30 +0.1
721,784 + ABIE41_RS03470 0.30 +0.2
721,784 + ABIE41_RS03470 0.30 +0.8
721,784 + ABIE41_RS03470 0.30 -2.2
721,784 + ABIE41_RS03470 0.30 -0.7
721,784 + ABIE41_RS03470 0.30 +0.7
721,784 + ABIE41_RS03470 0.30 -0.8
721,784 + ABIE41_RS03470 0.30 -1.9
721,784 + ABIE41_RS03470 0.30 -0.5
721,784 + ABIE41_RS03470 0.30 -0.2
721,784 + ABIE41_RS03470 0.30 -2.5
721,784 + ABIE41_RS03470 0.30 -1.0
721,785 - ABIE41_RS03470 0.30 -1.3
721,785 - ABIE41_RS03470 0.30 -0.7
721,785 - ABIE41_RS03470 0.30 +1.0
721,785 - ABIE41_RS03470 0.30 -0.3
721,785 - ABIE41_RS03470 0.30 +0.4
721,785 - ABIE41_RS03470 0.30 -3.1
721,785 - ABIE41_RS03470 0.30 -1.0
721,785 - ABIE41_RS03470 0.30 -0.7
722,003 + ABIE41_RS03470 0.64 +0.1
722,003 + ABIE41_RS03470 0.64 +0.2
722,003 + ABIE41_RS03470 0.64 -0.2
722,004 - ABIE41_RS03470 0.64 -0.4
722,004 - ABIE41_RS03470 0.64 +0.7
722,004 - ABIE41_RS03470 0.64 +1.4
722,018 + ABIE41_RS03470 0.67 +0.4
722,018 + ABIE41_RS03470 0.67 -0.1
722,019 - ABIE41_RS03470 0.67 -0.7
722,019 - ABIE41_RS03470 0.67 +1.4
722,019 - ABIE41_RS03470 0.67 +2.8
722,019 - ABIE41_RS03470 0.67 -1.4
722,019 - ABIE41_RS03470 0.67 +0.7
722,019 - ABIE41_RS03470 0.67 +1.1
722,019 - ABIE41_RS03470 0.67 -0.5
722,019 - ABIE41_RS03470 0.67 +0.2

Or see this region's nucleotide sequence