Experiment: Manganese (II) chloride tetrahydrate 50 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_25080 and IAI46_25085 are separated by 283 nucleotides IAI46_25085 and IAI46_25090 are separated by 2 nucleotides
IAI46_25080: IAI46_25080 - low affinity potassium transporter Kup, at 5,354,458 to 5,356,326
_25080
IAI46_25085: IAI46_25085 - ATPase RavA, at 5,356,610 to 5,358,118
_25085
IAI46_25090: IAI46_25090 - ATPase RavA stimulator ViaA, at 5,358,121 to 5,359,584
_25090
Position (kb) 5356
5357
5358
5359 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5355.632 kb on + strand, within IAI46_25080 at 5355.632 kb on + strand, within IAI46_25080 at 5355.696 kb on + strand, within IAI46_25080 at 5355.697 kb on - strand, within IAI46_25080 at 5355.697 kb on - strand, within IAI46_25080 at 5355.697 kb on - strand, within IAI46_25080 at 5355.697 kb on - strand, within IAI46_25080 at 5355.697 kb on - strand, within IAI46_25080 at 5355.697 kb on - strand, within IAI46_25080 at 5355.697 kb on - strand, within IAI46_25080 at 5355.698 kb on + strand, within IAI46_25080 at 5355.699 kb on - strand, within IAI46_25080 at 5355.699 kb on - strand, within IAI46_25080 at 5355.763 kb on - strand, within IAI46_25080 at 5355.883 kb on + strand, within IAI46_25080 at 5355.900 kb on + strand, within IAI46_25080 at 5355.900 kb on + strand, within IAI46_25080 at 5355.902 kb on + strand, within IAI46_25080 at 5355.902 kb on + strand, within IAI46_25080 at 5355.903 kb on - strand, within IAI46_25080 at 5355.903 kb on - strand, within IAI46_25080 at 5355.903 kb on - strand, within IAI46_25080 at 5355.940 kb on + strand, within IAI46_25080 at 5355.986 kb on + strand, within IAI46_25080 at 5356.032 kb on + strand, within IAI46_25080 at 5356.047 kb on + strand, within IAI46_25080 at 5356.047 kb on + strand, within IAI46_25080 at 5356.048 kb on - strand, within IAI46_25080 at 5356.048 kb on - strand, within IAI46_25080 at 5356.048 kb on - strand, within IAI46_25080 at 5356.050 kb on + strand, within IAI46_25080 at 5356.050 kb on + strand, within IAI46_25080 at 5356.050 kb on + strand, within IAI46_25080 at 5356.051 kb on - strand, within IAI46_25080 at 5356.098 kb on + strand, within IAI46_25080 at 5356.115 kb on + strand, within IAI46_25080 at 5356.115 kb on + strand, within IAI46_25080 at 5356.115 kb on + strand, within IAI46_25080 at 5356.115 kb on + strand, within IAI46_25080 at 5356.115 kb on + strand, within IAI46_25080 at 5356.116 kb on - strand, within IAI46_25080 at 5356.116 kb on - strand, within IAI46_25080 at 5356.116 kb on - strand, within IAI46_25080 at 5356.116 kb on - strand, within IAI46_25080 at 5356.116 kb on - strand, within IAI46_25080 at 5356.116 kb on - strand, within IAI46_25080 at 5356.116 kb on - strand, within IAI46_25080 at 5356.116 kb on - strand, within IAI46_25080 at 5356.124 kb on + strand, within IAI46_25080 at 5356.124 kb on + strand, within IAI46_25080 at 5356.125 kb on - strand, within IAI46_25080 at 5356.125 kb on - strand, within IAI46_25080 at 5356.236 kb on + strand at 5356.236 kb on + strand at 5356.236 kb on + strand at 5356.237 kb on - strand at 5356.237 kb on - strand at 5356.239 kb on - strand at 5356.311 kb on + strand at 5356.311 kb on + strand at 5356.311 kb on + strand at 5356.311 kb on + strand at 5356.312 kb on - strand at 5356.326 kb on + strand at 5356.326 kb on + strand at 5356.327 kb on - strand at 5356.340 kb on - strand at 5356.342 kb on + strand at 5356.343 kb on - strand at 5356.382 kb on - strand at 5356.390 kb on + strand at 5356.391 kb on - strand at 5356.391 kb on - strand at 5356.391 kb on - strand at 5356.423 kb on + strand at 5356.423 kb on + strand at 5356.423 kb on + strand at 5356.424 kb on - strand at 5356.435 kb on - strand at 5356.435 kb on - strand at 5356.435 kb on - strand at 5356.435 kb on - strand at 5356.437 kb on - strand at 5356.447 kb on + strand at 5356.448 kb on - strand at 5356.448 kb on - strand at 5356.453 kb on + strand at 5356.454 kb on - strand at 5356.454 kb on - strand at 5356.454 kb on - strand at 5356.454 kb on - strand at 5356.455 kb on + strand at 5356.455 kb on + strand at 5356.456 kb on - strand at 5356.456 kb on - strand at 5356.531 kb on + strand at 5356.532 kb on - strand at 5356.533 kb on + strand at 5356.534 kb on - strand at 5356.568 kb on - strand at 5356.584 kb on + strand at 5356.585 kb on - strand at 5356.606 kb on + strand at 5356.606 kb on + strand at 5356.607 kb on - strand at 5356.607 kb on - strand at 5356.676 kb on + strand at 5356.676 kb on + strand at 5356.786 kb on - strand, within IAI46_25085 at 5356.821 kb on - strand, within IAI46_25085 at 5356.821 kb on - strand, within IAI46_25085 at 5356.821 kb on - strand, within IAI46_25085 at 5357.079 kb on + strand, within IAI46_25085 at 5357.111 kb on + strand, within IAI46_25085 at 5357.111 kb on + strand, within IAI46_25085 at 5357.112 kb on - strand, within IAI46_25085 at 5357.112 kb on - strand, within IAI46_25085 at 5357.127 kb on + strand, within IAI46_25085 at 5357.127 kb on + strand, within IAI46_25085 at 5357.127 kb on + strand, within IAI46_25085 at 5357.128 kb on - strand, within IAI46_25085 at 5357.128 kb on - strand, within IAI46_25085 at 5357.128 kb on - strand, within IAI46_25085 at 5357.243 kb on + strand, within IAI46_25085 at 5357.243 kb on + strand, within IAI46_25085 at 5357.243 kb on + strand, within IAI46_25085 at 5357.243 kb on + strand, within IAI46_25085 at 5357.243 kb on + strand, within IAI46_25085 at 5357.244 kb on - strand, within IAI46_25085 at 5357.244 kb on - strand, within IAI46_25085 at 5357.304 kb on + strand, within IAI46_25085 at 5357.348 kb on + strand, within IAI46_25085 at 5357.349 kb on - strand, within IAI46_25085 at 5357.349 kb on - strand, within IAI46_25085 at 5357.349 kb on - strand, within IAI46_25085 at 5357.349 kb on - strand, within IAI46_25085 at 5357.349 kb on - strand, within IAI46_25085 at 5357.407 kb on - strand, within IAI46_25085 at 5357.482 kb on - strand, within IAI46_25085 at 5357.482 kb on - strand, within IAI46_25085 at 5357.482 kb on - strand, within IAI46_25085 at 5357.502 kb on + strand, within IAI46_25085 at 5357.503 kb on - strand, within IAI46_25085 at 5357.528 kb on + strand, within IAI46_25085 at 5357.528 kb on + strand, within IAI46_25085 at 5357.529 kb on - strand, within IAI46_25085 at 5357.529 kb on - strand, within IAI46_25085 at 5357.731 kb on + strand, within IAI46_25085 at 5357.752 kb on + strand, within IAI46_25085 at 5357.753 kb on - strand, within IAI46_25085 at 5357.799 kb on + strand, within IAI46_25085 at 5357.800 kb on - strand, within IAI46_25085 at 5357.918 kb on - strand, within IAI46_25085 at 5357.919 kb on + strand, within IAI46_25085 at 5357.919 kb on + strand, within IAI46_25085 at 5357.919 kb on + strand, within IAI46_25085 at 5357.920 kb on - strand, within IAI46_25085 at 5357.920 kb on - strand, within IAI46_25085 at 5358.025 kb on + strand at 5358.116 kb on + strand at 5358.117 kb on - strand at 5358.195 kb on + strand at 5358.195 kb on + strand at 5358.195 kb on + strand at 5358.343 kb on + strand, within IAI46_25090 at 5358.344 kb on - strand, within IAI46_25090 at 5358.365 kb on + strand, within IAI46_25090 at 5358.365 kb on + strand, within IAI46_25090 at 5358.366 kb on - strand, within IAI46_25090 at 5358.376 kb on - strand, within IAI46_25090 at 5358.390 kb on + strand, within IAI46_25090 at 5358.391 kb on - strand, within IAI46_25090 at 5358.391 kb on - strand, within IAI46_25090 at 5358.439 kb on + strand, within IAI46_25090 at 5358.439 kb on + strand, within IAI46_25090 at 5358.439 kb on + strand, within IAI46_25090 at 5358.439 kb on + strand, within IAI46_25090 at 5358.439 kb on + strand, within IAI46_25090 at 5358.439 kb on + strand, within IAI46_25090 at 5358.518 kb on + strand, within IAI46_25090 at 5358.519 kb on - strand, within IAI46_25090 at 5358.519 kb on - strand, within IAI46_25090 at 5358.799 kb on + strand, within IAI46_25090 at 5358.799 kb on + strand, within IAI46_25090 at 5358.800 kb on - strand, within IAI46_25090 at 5358.800 kb on - strand, within IAI46_25090 at 5358.800 kb on - strand, within IAI46_25090 at 5358.800 kb on - strand, within IAI46_25090 at 5358.894 kb on + strand, within IAI46_25090 at 5359.044 kb on - strand, within IAI46_25090 at 5359.044 kb on - strand, within IAI46_25090
Per-strain Table
Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 50 uM, aerobic remove 5,355,632 + IAI46_25080 0.63 +2.7 5,355,632 + IAI46_25080 0.63 -1.2 5,355,696 + IAI46_25080 0.66 +0.2 5,355,697 - IAI46_25080 0.66 +0.9 5,355,697 - IAI46_25080 0.66 +0.0 5,355,697 - IAI46_25080 0.66 -0.2 5,355,697 - IAI46_25080 0.66 +0.4 5,355,697 - IAI46_25080 0.66 -0.5 5,355,697 - IAI46_25080 0.66 +0.6 5,355,697 - IAI46_25080 0.66 -0.7 5,355,698 + IAI46_25080 0.66 -0.1 5,355,699 - IAI46_25080 0.66 +0.8 5,355,699 - IAI46_25080 0.66 -0.9 5,355,763 - IAI46_25080 0.70 +0.4 5,355,883 + IAI46_25080 0.76 +2.0 5,355,900 + IAI46_25080 0.77 -1.1 5,355,900 + IAI46_25080 0.77 -0.1 5,355,902 + IAI46_25080 0.77 +0.9 5,355,902 + IAI46_25080 0.77 -0.1 5,355,903 - IAI46_25080 0.77 -0.5 5,355,903 - IAI46_25080 0.77 +0.6 5,355,903 - IAI46_25080 0.77 -0.2 5,355,940 + IAI46_25080 0.79 -0.5 5,355,986 + IAI46_25080 0.82 -0.5 5,356,032 + IAI46_25080 0.84 +0.2 5,356,047 + IAI46_25080 0.85 -0.2 5,356,047 + IAI46_25080 0.85 +1.0 5,356,048 - IAI46_25080 0.85 -1.1 5,356,048 - IAI46_25080 0.85 -0.1 5,356,048 - IAI46_25080 0.85 +0.4 5,356,050 + IAI46_25080 0.85 -0.1 5,356,050 + IAI46_25080 0.85 +0.7 5,356,050 + IAI46_25080 0.85 +0.2 5,356,051 - IAI46_25080 0.85 +0.4 5,356,098 + IAI46_25080 0.88 +1.1 5,356,115 + IAI46_25080 0.89 +0.6 5,356,115 + IAI46_25080 0.89 +0.5 5,356,115 + IAI46_25080 0.89 -0.1 5,356,115 + IAI46_25080 0.89 +0.4 5,356,115 + IAI46_25080 0.89 -0.9 5,356,116 - IAI46_25080 0.89 +0.3 5,356,116 - IAI46_25080 0.89 +0.2 5,356,116 - IAI46_25080 0.89 -0.6 5,356,116 - IAI46_25080 0.89 -0.5 5,356,116 - IAI46_25080 0.89 -0.1 5,356,116 - IAI46_25080 0.89 +0.2 5,356,116 - IAI46_25080 0.89 +0.2 5,356,116 - IAI46_25080 0.89 +1.0 5,356,124 + IAI46_25080 0.89 +0.0 5,356,124 + IAI46_25080 0.89 +0.3 5,356,125 - IAI46_25080 0.89 +1.3 5,356,125 - IAI46_25080 0.89 +0.1 5,356,236 + +0.5 5,356,236 + -0.0 5,356,236 + -0.8 5,356,237 - -0.5 5,356,237 - +0.6 5,356,239 - -0.4 5,356,311 + +0.5 5,356,311 + +0.2 5,356,311 + +0.1 5,356,311 + +1.3 5,356,312 - +0.1 5,356,326 + +0.4 5,356,326 + -0.6 5,356,327 - -1.5 5,356,340 - -0.2 5,356,342 + +0.2 5,356,343 - +0.8 5,356,382 - -0.6 5,356,390 + -0.3 5,356,391 - -0.5 5,356,391 - -1.2 5,356,391 - -0.1 5,356,423 + -0.0 5,356,423 + +0.5 5,356,423 + +0.1 5,356,424 - +0.2 5,356,435 - +0.3 5,356,435 - +0.4 5,356,435 - -0.9 5,356,435 - -0.2 5,356,437 - +0.3 5,356,447 + +0.3 5,356,448 - +0.6 5,356,448 - -0.1 5,356,453 + -0.1 5,356,454 - -0.4 5,356,454 - -0.5 5,356,454 - +1.3 5,356,454 - -0.1 5,356,455 + -0.6 5,356,455 + -0.0 5,356,456 - -0.3 5,356,456 - -0.9 5,356,531 + -0.4 5,356,532 - -0.4 5,356,533 + +0.5 5,356,534 - -0.7 5,356,568 - +0.4 5,356,584 + +1.3 5,356,585 - -0.0 5,356,606 + +0.0 5,356,606 + -0.2 5,356,607 - +0.2 5,356,607 - +0.0 5,356,676 + +0.3 5,356,676 + +0.2 5,356,786 - IAI46_25085 0.12 +0.0 5,356,821 - IAI46_25085 0.14 +1.0 5,356,821 - IAI46_25085 0.14 +0.3 5,356,821 - IAI46_25085 0.14 -0.1 5,357,079 + IAI46_25085 0.31 +0.6 5,357,111 + IAI46_25085 0.33 +0.1 5,357,111 + IAI46_25085 0.33 +0.2 5,357,112 - IAI46_25085 0.33 +0.0 5,357,112 - IAI46_25085 0.33 +0.1 5,357,127 + IAI46_25085 0.34 +0.6 5,357,127 + IAI46_25085 0.34 +0.3 5,357,127 + IAI46_25085 0.34 -0.2 5,357,128 - IAI46_25085 0.34 +0.4 5,357,128 - IAI46_25085 0.34 +0.4 5,357,128 - IAI46_25085 0.34 -1.6 5,357,243 + IAI46_25085 0.42 +0.2 5,357,243 + IAI46_25085 0.42 +0.3 5,357,243 + IAI46_25085 0.42 +0.3 5,357,243 + IAI46_25085 0.42 +1.4 5,357,243 + IAI46_25085 0.42 +0.5 5,357,244 - IAI46_25085 0.42 -0.4 5,357,244 - IAI46_25085 0.42 -0.3 5,357,304 + IAI46_25085 0.46 +1.2 5,357,348 + IAI46_25085 0.49 -0.1 5,357,349 - IAI46_25085 0.49 +1.0 5,357,349 - IAI46_25085 0.49 -0.2 5,357,349 - IAI46_25085 0.49 -0.5 5,357,349 - IAI46_25085 0.49 +0.4 5,357,349 - IAI46_25085 0.49 +0.0 5,357,407 - IAI46_25085 0.53 +1.4 5,357,482 - IAI46_25085 0.58 -0.2 5,357,482 - IAI46_25085 0.58 +0.1 5,357,482 - IAI46_25085 0.58 +0.1 5,357,502 + IAI46_25085 0.59 +0.9 5,357,503 - IAI46_25085 0.59 +1.2 5,357,528 + IAI46_25085 0.61 +0.2 5,357,528 + IAI46_25085 0.61 +0.1 5,357,529 - IAI46_25085 0.61 -0.3 5,357,529 - IAI46_25085 0.61 -0.1 5,357,731 + IAI46_25085 0.74 -0.3 5,357,752 + IAI46_25085 0.76 +0.4 5,357,753 - IAI46_25085 0.76 -0.0 5,357,799 + IAI46_25085 0.79 -0.8 5,357,800 - IAI46_25085 0.79 -0.0 5,357,918 - IAI46_25085 0.87 -0.3 5,357,919 + IAI46_25085 0.87 +0.6 5,357,919 + IAI46_25085 0.87 -0.2 5,357,919 + IAI46_25085 0.87 -0.0 5,357,920 - IAI46_25085 0.87 +0.8 5,357,920 - IAI46_25085 0.87 +1.0 5,358,025 + +1.4 5,358,116 + +0.8 5,358,117 - -0.3 5,358,195 + -0.1 5,358,195 + +0.9 5,358,195 + +1.3 5,358,343 + IAI46_25090 0.15 +1.2 5,358,344 - IAI46_25090 0.15 +1.9 5,358,365 + IAI46_25090 0.17 +1.9 5,358,365 + IAI46_25090 0.17 +0.9 5,358,366 - IAI46_25090 0.17 -0.5 5,358,376 - IAI46_25090 0.17 -0.0 5,358,390 + IAI46_25090 0.18 -0.4 5,358,391 - IAI46_25090 0.18 -0.3 5,358,391 - IAI46_25090 0.18 -0.7 5,358,439 + IAI46_25090 0.22 -0.3 5,358,439 + IAI46_25090 0.22 +0.3 5,358,439 + IAI46_25090 0.22 -0.2 5,358,439 + IAI46_25090 0.22 +0.9 5,358,439 + IAI46_25090 0.22 -0.1 5,358,439 + IAI46_25090 0.22 +0.9 5,358,518 + IAI46_25090 0.27 -0.2 5,358,519 - IAI46_25090 0.27 -0.4 5,358,519 - IAI46_25090 0.27 +0.4 5,358,799 + IAI46_25090 0.46 -0.2 5,358,799 + IAI46_25090 0.46 +0.9 5,358,800 - IAI46_25090 0.46 +0.6 5,358,800 - IAI46_25090 0.46 -0.7 5,358,800 - IAI46_25090 0.46 -2.7 5,358,800 - IAI46_25090 0.46 -0.3 5,358,894 + IAI46_25090 0.53 -0.0 5,359,044 - IAI46_25090 0.63 +0.9 5,359,044 - IAI46_25090 0.63 -0.2
Or see this region's nucleotide sequence