Experiment: Manganese (II) chloride tetrahydrate 50 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_23945 and IAI46_23950 are separated by 213 nucleotides IAI46_23950 and IAI46_23955 are separated by 48 nucleotides IAI46_23955 and IAI46_23960 are separated by 184 nucleotides
IAI46_23945: IAI46_23945 - aspartate-semialdehyde dehydrogenase, at 5,098,685 to 5,099,788
_23945
IAI46_23950: IAI46_23950 - YhgN family NAAT transporter, at 5,100,002 to 5,100,595
_23950
IAI46_23955: IAI46_23955 - gluconokinase, at 5,100,644 to 5,101,171
_23955
IAI46_23960: IAI46_23960 - gluconate transporter, at 5,101,356 to 5,102,672
_23960
Position (kb)
5100
5101
5102 Strain fitness (log2 ratio)
-1
0
1
2 at 5099.821 kb on - strand at 5099.821 kb on - strand at 5099.821 kb on - strand at 5099.835 kb on - strand at 5099.880 kb on - strand at 5099.914 kb on + strand at 5099.914 kb on + strand at 5099.914 kb on + strand at 5099.915 kb on - strand at 5099.915 kb on - strand at 5099.915 kb on - strand at 5099.915 kb on - strand at 5099.915 kb on - strand at 5099.915 kb on - strand at 5099.916 kb on + strand at 5099.916 kb on + strand at 5099.916 kb on + strand at 5099.916 kb on + strand at 5099.916 kb on + strand at 5099.916 kb on + strand at 5099.916 kb on + strand at 5099.916 kb on + strand at 5099.917 kb on - strand at 5099.917 kb on - strand at 5099.917 kb on - strand at 5099.917 kb on - strand at 5099.917 kb on - strand at 5099.917 kb on - strand at 5099.917 kb on - strand at 5099.917 kb on - strand at 5099.917 kb on - strand at 5099.917 kb on - strand at 5099.917 kb on - strand at 5099.917 kb on - strand at 5099.917 kb on - strand at 5099.917 kb on - strand at 5099.917 kb on - strand at 5099.918 kb on + strand at 5099.918 kb on + strand at 5099.918 kb on + strand at 5099.918 kb on + strand at 5099.953 kb on - strand at 5099.997 kb on + strand at 5099.997 kb on + strand at 5099.997 kb on + strand at 5099.998 kb on - strand at 5099.998 kb on - strand at 5099.998 kb on - strand at 5099.998 kb on - strand at 5100.039 kb on + strand at 5100.081 kb on + strand, within IAI46_23950 at 5100.081 kb on + strand, within IAI46_23950 at 5100.160 kb on - strand, within IAI46_23950 at 5100.236 kb on - strand, within IAI46_23950 at 5100.581 kb on + strand at 5100.581 kb on + strand at 5100.581 kb on + strand at 5100.582 kb on - strand at 5100.594 kb on - strand at 5100.594 kb on - strand at 5100.594 kb on - strand at 5100.600 kb on + strand at 5100.646 kb on - strand at 5100.667 kb on + strand at 5100.667 kb on + strand at 5100.669 kb on + strand at 5100.852 kb on + strand, within IAI46_23955 at 5100.853 kb on - strand, within IAI46_23955 at 5100.897 kb on + strand, within IAI46_23955 at 5100.961 kb on + strand, within IAI46_23955 at 5100.962 kb on - strand, within IAI46_23955 at 5101.033 kb on + strand, within IAI46_23955 at 5101.144 kb on + strand at 5101.149 kb on - strand at 5101.149 kb on - strand at 5101.165 kb on + strand at 5101.166 kb on - strand at 5101.171 kb on + strand at 5101.171 kb on + strand at 5101.172 kb on - strand at 5101.172 kb on - strand at 5101.172 kb on - strand at 5101.199 kb on + strand at 5101.199 kb on + strand at 5101.200 kb on - strand at 5101.354 kb on + strand at 5101.355 kb on - strand at 5101.357 kb on + strand at 5101.357 kb on + strand at 5101.463 kb on - strand at 5101.665 kb on - strand, within IAI46_23960 at 5101.728 kb on + strand, within IAI46_23960 at 5101.729 kb on - strand, within IAI46_23960 at 5101.821 kb on - strand, within IAI46_23960 at 5101.922 kb on + strand, within IAI46_23960 at 5101.922 kb on + strand, within IAI46_23960 at 5102.047 kb on + strand, within IAI46_23960 at 5102.047 kb on + strand, within IAI46_23960 at 5102.047 kb on + strand, within IAI46_23960 at 5102.047 kb on + strand, within IAI46_23960 at 5102.047 kb on + strand, within IAI46_23960 at 5102.047 kb on + strand, within IAI46_23960 at 5102.047 kb on + strand, within IAI46_23960 at 5102.048 kb on - strand, within IAI46_23960 at 5102.095 kb on + strand, within IAI46_23960 at 5102.095 kb on + strand, within IAI46_23960 at 5102.095 kb on + strand, within IAI46_23960 at 5102.096 kb on - strand, within IAI46_23960 at 5102.096 kb on - strand, within IAI46_23960 at 5102.096 kb on - strand, within IAI46_23960 at 5102.144 kb on - strand, within IAI46_23960 at 5102.156 kb on + strand, within IAI46_23960 at 5102.156 kb on + strand, within IAI46_23960 at 5102.157 kb on - strand, within IAI46_23960
Per-strain Table
Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 50 uM, aerobic remove 5,099,821 - -0.8 5,099,821 - +0.0 5,099,821 - +0.0 5,099,835 - +0.4 5,099,880 - -0.3 5,099,914 + -0.2 5,099,914 + +0.2 5,099,914 + -0.8 5,099,915 - -0.4 5,099,915 - +0.5 5,099,915 - +0.4 5,099,915 - +0.2 5,099,915 - +0.1 5,099,915 - +0.1 5,099,916 + -0.4 5,099,916 + -0.8 5,099,916 + +1.1 5,099,916 + +0.2 5,099,916 + -0.2 5,099,916 + +0.4 5,099,916 + -0.1 5,099,916 + +0.4 5,099,917 - +0.3 5,099,917 - -0.0 5,099,917 - +0.1 5,099,917 - +0.1 5,099,917 - -0.6 5,099,917 - -0.3 5,099,917 - -0.0 5,099,917 - +0.7 5,099,917 - +0.4 5,099,917 - -0.7 5,099,917 - +0.2 5,099,917 - +0.2 5,099,917 - +0.0 5,099,917 - -0.3 5,099,917 - -0.1 5,099,918 + +1.4 5,099,918 + -0.2 5,099,918 + +2.2 5,099,918 + -0.3 5,099,953 - +1.2 5,099,997 + +0.8 5,099,997 + +0.1 5,099,997 + +0.5 5,099,998 - -0.8 5,099,998 - -0.1 5,099,998 - -1.6 5,099,998 - +0.4 5,100,039 + -0.5 5,100,081 + IAI46_23950 0.13 -0.2 5,100,081 + IAI46_23950 0.13 -0.5 5,100,160 - IAI46_23950 0.27 -0.3 5,100,236 - IAI46_23950 0.39 -0.4 5,100,581 + -0.8 5,100,581 + +0.9 5,100,581 + +1.2 5,100,582 - +0.7 5,100,594 - +0.1 5,100,594 - +0.8 5,100,594 - +0.5 5,100,600 + +0.3 5,100,646 - +0.3 5,100,667 + +1.2 5,100,667 + -0.0 5,100,669 + -0.3 5,100,852 + IAI46_23955 0.39 -0.2 5,100,853 - IAI46_23955 0.40 +0.1 5,100,897 + IAI46_23955 0.48 +0.1 5,100,961 + IAI46_23955 0.60 +0.6 5,100,962 - IAI46_23955 0.60 +0.7 5,101,033 + IAI46_23955 0.74 +0.2 5,101,144 + +1.0 5,101,149 - +0.6 5,101,149 - -0.0 5,101,165 + -0.4 5,101,166 - -0.2 5,101,171 + +0.2 5,101,171 + +0.4 5,101,172 - -0.1 5,101,172 - -0.1 5,101,172 - +0.2 5,101,199 + +0.8 5,101,199 + -1.1 5,101,200 - +0.6 5,101,354 + -1.2 5,101,355 - +0.5 5,101,357 + -1.1 5,101,357 + -1.4 5,101,463 - -0.4 5,101,665 - IAI46_23960 0.23 -0.7 5,101,728 + IAI46_23960 0.28 +0.2 5,101,729 - IAI46_23960 0.28 +0.1 5,101,821 - IAI46_23960 0.35 +0.6 5,101,922 + IAI46_23960 0.43 +0.4 5,101,922 + IAI46_23960 0.43 +2.0 5,102,047 + IAI46_23960 0.52 +0.5 5,102,047 + IAI46_23960 0.52 +0.1 5,102,047 + IAI46_23960 0.52 -0.4 5,102,047 + IAI46_23960 0.52 +0.5 5,102,047 + IAI46_23960 0.52 +0.2 5,102,047 + IAI46_23960 0.52 +0.8 5,102,047 + IAI46_23960 0.52 +0.2 5,102,048 - IAI46_23960 0.53 +1.2 5,102,095 + IAI46_23960 0.56 +1.2 5,102,095 + IAI46_23960 0.56 +0.8 5,102,095 + IAI46_23960 0.56 -0.1 5,102,096 - IAI46_23960 0.56 +0.6 5,102,096 - IAI46_23960 0.56 +1.0 5,102,096 - IAI46_23960 0.56 +0.2 5,102,144 - IAI46_23960 0.60 -0.2 5,102,156 + IAI46_23960 0.61 +0.2 5,102,156 + IAI46_23960 0.61 +0.1 5,102,157 - IAI46_23960 0.61 +0.4
Or see this region's nucleotide sequence