Experiment: Manganese (II) chloride tetrahydrate 50 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_22400 and IAI46_22405 are separated by 55 nucleotides IAI46_22405 and IAI46_22410 are separated by 140 nucleotides IAI46_22410 and IAI46_22415 overlap by 1 nucleotides IAI46_22415 and IAI46_22420 are separated by 14 nucleotides
IAI46_22400: IAI46_22400 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase, at 4,773,807 to 4,775,066
_22400
IAI46_22405: IAI46_22405 - BolA family iron metabolism protein IbaG, at 4,775,122 to 4,775,376
_22405
IAI46_22410: IAI46_22410 - lipid asymmetry maintenance protein MlaB, at 4,775,517 to 4,775,819
_22410
IAI46_22415: IAI46_22415 - phospholipid-binding protein MlaC, at 4,775,819 to 4,776,448
_22415
IAI46_22420: IAI46_22420 - outer membrane lipid asymmetry maintenance protein MlaD, at 4,776,463 to 4,777,014
_22420
Position (kb) 4775
4776 Strain fitness (log2 ratio) -1
0
1
2 at 4775.169 kb on - strand, within IAI46_22405 at 4775.169 kb on - strand, within IAI46_22405 at 4775.176 kb on - strand, within IAI46_22405 at 4775.194 kb on - strand, within IAI46_22405 at 4775.211 kb on - strand, within IAI46_22405 at 4775.211 kb on - strand, within IAI46_22405 at 4775.211 kb on - strand, within IAI46_22405 at 4775.211 kb on - strand, within IAI46_22405 at 4775.229 kb on - strand, within IAI46_22405 at 4775.359 kb on - strand at 4775.377 kb on - strand at 4775.392 kb on - strand at 4775.406 kb on - strand at 4775.406 kb on - strand at 4775.406 kb on - strand at 4775.423 kb on - strand at 4775.444 kb on - strand at 4775.465 kb on + strand at 4775.466 kb on - strand at 4775.541 kb on + strand at 4775.541 kb on + strand at 4775.542 kb on - strand at 4775.542 kb on - strand at 4775.542 kb on - strand at 4775.542 kb on - strand at 4775.557 kb on + strand, within IAI46_22410 at 4775.557 kb on + strand, within IAI46_22410 at 4775.706 kb on - strand, within IAI46_22410 at 4775.839 kb on + strand at 4775.896 kb on + strand, within IAI46_22415 at 4775.897 kb on - strand, within IAI46_22415 at 4775.897 kb on - strand, within IAI46_22415 at 4775.897 kb on - strand, within IAI46_22415 at 4775.900 kb on + strand, within IAI46_22415 at 4775.900 kb on + strand, within IAI46_22415 at 4775.901 kb on - strand, within IAI46_22415 at 4775.901 kb on - strand, within IAI46_22415 at 4775.905 kb on + strand, within IAI46_22415 at 4775.905 kb on + strand, within IAI46_22415 at 4775.905 kb on + strand, within IAI46_22415 at 4775.905 kb on + strand, within IAI46_22415 at 4775.964 kb on + strand, within IAI46_22415 at 4775.964 kb on + strand, within IAI46_22415 at 4775.965 kb on - strand, within IAI46_22415 at 4776.105 kb on + strand, within IAI46_22415 at 4776.105 kb on + strand, within IAI46_22415 at 4776.106 kb on - strand, within IAI46_22415 at 4776.106 kb on - strand, within IAI46_22415 at 4776.106 kb on - strand, within IAI46_22415 at 4776.120 kb on + strand, within IAI46_22415 at 4776.120 kb on + strand, within IAI46_22415 at 4776.120 kb on + strand, within IAI46_22415 at 4776.120 kb on + strand, within IAI46_22415 at 4776.120 kb on + strand, within IAI46_22415 at 4776.120 kb on + strand, within IAI46_22415 at 4776.121 kb on - strand, within IAI46_22415 at 4776.121 kb on - strand, within IAI46_22415 at 4776.142 kb on - strand, within IAI46_22415 at 4776.142 kb on - strand, within IAI46_22415 at 4776.156 kb on + strand, within IAI46_22415 at 4776.156 kb on + strand, within IAI46_22415 at 4776.177 kb on + strand, within IAI46_22415 at 4776.178 kb on - strand, within IAI46_22415 at 4776.178 kb on - strand, within IAI46_22415 at 4776.178 kb on - strand, within IAI46_22415 at 4776.178 kb on - strand, within IAI46_22415 at 4776.295 kb on + strand, within IAI46_22415 at 4776.295 kb on + strand, within IAI46_22415 at 4776.295 kb on + strand, within IAI46_22415 at 4776.295 kb on + strand, within IAI46_22415 at 4776.296 kb on - strand, within IAI46_22415 at 4776.296 kb on - strand, within IAI46_22415 at 4776.296 kb on - strand, within IAI46_22415 at 4776.296 kb on - strand, within IAI46_22415 at 4776.296 kb on - strand, within IAI46_22415 at 4776.373 kb on - strand, within IAI46_22415 at 4776.373 kb on - strand, within IAI46_22415 at 4776.431 kb on - strand at 4776.431 kb on - strand at 4776.431 kb on - strand at 4776.442 kb on + strand at 4776.443 kb on - strand at 4776.443 kb on - strand at 4776.443 kb on - strand at 4776.443 kb on - strand at 4776.443 kb on - strand at 4776.464 kb on + strand at 4776.464 kb on + strand at 4776.464 kb on + strand at 4776.471 kb on + strand at 4776.558 kb on + strand, within IAI46_22420 at 4776.559 kb on - strand, within IAI46_22420 at 4776.559 kb on - strand, within IAI46_22420 at 4776.560 kb on + strand, within IAI46_22420 at 4776.561 kb on - strand, within IAI46_22420 at 4776.561 kb on - strand, within IAI46_22420 at 4776.683 kb on + strand, within IAI46_22420 at 4776.684 kb on - strand, within IAI46_22420 at 4776.684 kb on - strand, within IAI46_22420 at 4776.684 kb on - strand, within IAI46_22420 at 4776.684 kb on - strand, within IAI46_22420 at 4776.747 kb on - strand, within IAI46_22420 at 4776.747 kb on - strand, within IAI46_22420 at 4776.750 kb on + strand, within IAI46_22420 at 4776.751 kb on - strand, within IAI46_22420 at 4776.782 kb on + strand, within IAI46_22420 at 4776.782 kb on + strand, within IAI46_22420 at 4776.783 kb on - strand, within IAI46_22420 at 4776.783 kb on - strand, within IAI46_22420 at 4776.789 kb on + strand, within IAI46_22420 at 4776.801 kb on + strand, within IAI46_22420 at 4776.802 kb on - strand, within IAI46_22420 at 4776.805 kb on - strand, within IAI46_22420
Per-strain Table
Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 50 uM, aerobic remove 4,775,169 - IAI46_22405 0.18 -0.7 4,775,169 - IAI46_22405 0.18 +0.1 4,775,176 - IAI46_22405 0.21 -0.2 4,775,194 - IAI46_22405 0.28 +0.2 4,775,211 - IAI46_22405 0.35 -0.2 4,775,211 - IAI46_22405 0.35 -0.5 4,775,211 - IAI46_22405 0.35 +0.9 4,775,211 - IAI46_22405 0.35 +0.3 4,775,229 - IAI46_22405 0.42 +1.2 4,775,359 - -0.2 4,775,377 - +0.0 4,775,392 - +0.4 4,775,406 - +0.3 4,775,406 - +0.3 4,775,406 - +0.4 4,775,423 - -0.4 4,775,444 - +0.9 4,775,465 + +0.8 4,775,466 - +0.1 4,775,541 + +0.7 4,775,541 + +1.6 4,775,542 - +0.6 4,775,542 - +0.0 4,775,542 - +0.5 4,775,542 - +0.2 4,775,557 + IAI46_22410 0.13 +0.5 4,775,557 + IAI46_22410 0.13 -0.7 4,775,706 - IAI46_22410 0.62 +0.3 4,775,839 + +1.4 4,775,896 + IAI46_22415 0.12 +0.1 4,775,897 - IAI46_22415 0.12 +0.3 4,775,897 - IAI46_22415 0.12 -0.8 4,775,897 - IAI46_22415 0.12 -0.2 4,775,900 + IAI46_22415 0.13 -0.0 4,775,900 + IAI46_22415 0.13 +1.4 4,775,901 - IAI46_22415 0.13 +0.6 4,775,901 - IAI46_22415 0.13 +0.0 4,775,905 + IAI46_22415 0.14 +0.2 4,775,905 + IAI46_22415 0.14 +0.2 4,775,905 + IAI46_22415 0.14 -1.5 4,775,905 + IAI46_22415 0.14 -1.6 4,775,964 + IAI46_22415 0.23 +1.3 4,775,964 + IAI46_22415 0.23 +0.2 4,775,965 - IAI46_22415 0.23 -0.2 4,776,105 + IAI46_22415 0.45 +0.6 4,776,105 + IAI46_22415 0.45 +1.6 4,776,106 - IAI46_22415 0.46 -0.2 4,776,106 - IAI46_22415 0.46 +0.3 4,776,106 - IAI46_22415 0.46 -0.9 4,776,120 + IAI46_22415 0.48 -1.1 4,776,120 + IAI46_22415 0.48 -0.6 4,776,120 + IAI46_22415 0.48 -0.3 4,776,120 + IAI46_22415 0.48 -0.2 4,776,120 + IAI46_22415 0.48 -0.6 4,776,120 + IAI46_22415 0.48 -0.0 4,776,121 - IAI46_22415 0.48 +0.5 4,776,121 - IAI46_22415 0.48 +0.2 4,776,142 - IAI46_22415 0.51 +1.0 4,776,142 - IAI46_22415 0.51 +0.8 4,776,156 + IAI46_22415 0.53 +0.4 4,776,156 + IAI46_22415 0.53 +0.2 4,776,177 + IAI46_22415 0.57 -0.6 4,776,178 - IAI46_22415 0.57 -0.0 4,776,178 - IAI46_22415 0.57 +0.2 4,776,178 - IAI46_22415 0.57 -0.2 4,776,178 - IAI46_22415 0.57 -0.4 4,776,295 + IAI46_22415 0.76 -0.4 4,776,295 + IAI46_22415 0.76 +0.3 4,776,295 + IAI46_22415 0.76 +0.4 4,776,295 + IAI46_22415 0.76 +0.1 4,776,296 - IAI46_22415 0.76 -0.0 4,776,296 - IAI46_22415 0.76 -0.0 4,776,296 - IAI46_22415 0.76 +0.7 4,776,296 - IAI46_22415 0.76 +0.1 4,776,296 - IAI46_22415 0.76 -0.7 4,776,373 - IAI46_22415 0.88 -0.1 4,776,373 - IAI46_22415 0.88 +0.5 4,776,431 - +0.3 4,776,431 - -0.4 4,776,431 - +0.6 4,776,442 + +2.6 4,776,443 - +0.4 4,776,443 - -0.2 4,776,443 - +1.6 4,776,443 - -1.2 4,776,443 - -0.3 4,776,464 + +0.7 4,776,464 + +0.5 4,776,464 + +1.0 4,776,471 + -1.1 4,776,558 + IAI46_22420 0.17 +0.7 4,776,559 - IAI46_22420 0.17 -0.0 4,776,559 - IAI46_22420 0.17 -0.2 4,776,560 + IAI46_22420 0.18 -0.8 4,776,561 - IAI46_22420 0.18 +0.3 4,776,561 - IAI46_22420 0.18 +0.9 4,776,683 + IAI46_22420 0.40 +0.6 4,776,684 - IAI46_22420 0.40 +0.1 4,776,684 - IAI46_22420 0.40 +0.2 4,776,684 - IAI46_22420 0.40 +0.8 4,776,684 - IAI46_22420 0.40 +0.2 4,776,747 - IAI46_22420 0.51 +0.5 4,776,747 - IAI46_22420 0.51 -0.1 4,776,750 + IAI46_22420 0.52 +0.7 4,776,751 - IAI46_22420 0.52 -0.4 4,776,782 + IAI46_22420 0.58 +1.2 4,776,782 + IAI46_22420 0.58 +0.6 4,776,783 - IAI46_22420 0.58 -1.2 4,776,783 - IAI46_22420 0.58 +0.4 4,776,789 + IAI46_22420 0.59 +1.1 4,776,801 + IAI46_22420 0.61 +0.4 4,776,802 - IAI46_22420 0.61 -0.0 4,776,805 - IAI46_22420 0.62 +1.2
Or see this region's nucleotide sequence