Experiment: Manganese (II) chloride tetrahydrate 50 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_22355 and IAI46_22360 are separated by 66 nucleotides IAI46_22360 and IAI46_22365 are separated by 5 nucleotides IAI46_22365 and IAI46_22370 are separated by 337 nucleotides IAI46_22370 and IAI46_22375 are separated by 15 nucleotides
IAI46_22355: IAI46_22355 - hypothetical protein, at 4,766,115 to 4,766,594
_22355
IAI46_22360: IAI46_22360 - ClpXP protease specificity-enhancing factor, at 4,766,661 to 4,767,158
_22360
IAI46_22365: IAI46_22365 - stringent starvation protein A, at 4,767,164 to 4,767,805
_22365
IAI46_22370: IAI46_22370 - 30S ribosomal protein S9, at 4,768,143 to 4,768,535
_22370
IAI46_22375: IAI46_22375 - 50S ribosomal protein L13, at 4,768,551 to 4,768,979
_22375
Position (kb)
4767
4768 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4766.205 kb on + strand, within IAI46_22355 at 4766.205 kb on + strand, within IAI46_22355 at 4766.207 kb on + strand, within IAI46_22355 at 4766.207 kb on + strand, within IAI46_22355 at 4766.207 kb on + strand, within IAI46_22355 at 4766.208 kb on - strand, within IAI46_22355 at 4766.208 kb on - strand, within IAI46_22355 at 4766.208 kb on - strand, within IAI46_22355 at 4766.208 kb on - strand, within IAI46_22355 at 4766.208 kb on - strand, within IAI46_22355 at 4766.303 kb on + strand, within IAI46_22355 at 4766.394 kb on + strand, within IAI46_22355 at 4766.394 kb on + strand, within IAI46_22355 at 4766.394 kb on + strand, within IAI46_22355 at 4766.395 kb on - strand, within IAI46_22355 at 4766.395 kb on - strand, within IAI46_22355 at 4766.395 kb on - strand, within IAI46_22355 at 4766.397 kb on - strand, within IAI46_22355 at 4766.435 kb on + strand, within IAI46_22355 at 4766.436 kb on - strand, within IAI46_22355 at 4766.436 kb on - strand, within IAI46_22355 at 4766.441 kb on - strand, within IAI46_22355 at 4766.441 kb on - strand, within IAI46_22355 at 4766.453 kb on + strand, within IAI46_22355 at 4766.453 kb on + strand, within IAI46_22355 at 4766.454 kb on - strand, within IAI46_22355 at 4766.454 kb on - strand, within IAI46_22355 at 4766.460 kb on - strand, within IAI46_22355 at 4766.486 kb on + strand, within IAI46_22355 at 4766.487 kb on - strand, within IAI46_22355 at 4766.573 kb on + strand at 4766.574 kb on - strand at 4766.662 kb on + strand at 4766.729 kb on + strand, within IAI46_22360 at 4766.830 kb on + strand, within IAI46_22360 at 4766.878 kb on + strand, within IAI46_22360 at 4766.878 kb on + strand, within IAI46_22360 at 4766.879 kb on - strand, within IAI46_22360 at 4766.879 kb on - strand, within IAI46_22360 at 4767.063 kb on + strand, within IAI46_22360 at 4767.063 kb on + strand, within IAI46_22360 at 4767.064 kb on - strand, within IAI46_22360 at 4767.064 kb on - strand, within IAI46_22360 at 4767.081 kb on + strand, within IAI46_22360 at 4767.106 kb on + strand, within IAI46_22360 at 4767.106 kb on + strand, within IAI46_22360 at 4767.106 kb on + strand, within IAI46_22360 at 4767.107 kb on - strand, within IAI46_22360 at 4767.124 kb on + strand at 4767.125 kb on - strand at 4767.152 kb on + strand at 4767.153 kb on - strand at 4767.153 kb on - strand at 4767.153 kb on - strand at 4767.166 kb on - strand at 4767.166 kb on - strand at 4767.166 kb on - strand at 4767.250 kb on - strand, within IAI46_22365 at 4767.250 kb on - strand, within IAI46_22365 at 4767.250 kb on - strand, within IAI46_22365 at 4767.250 kb on - strand, within IAI46_22365 at 4767.250 kb on - strand, within IAI46_22365 at 4767.250 kb on - strand, within IAI46_22365 at 4767.293 kb on + strand, within IAI46_22365 at 4767.294 kb on - strand, within IAI46_22365 at 4767.363 kb on + strand, within IAI46_22365 at 4767.363 kb on + strand, within IAI46_22365 at 4767.463 kb on - strand, within IAI46_22365 at 4767.574 kb on - strand, within IAI46_22365 at 4767.587 kb on - strand, within IAI46_22365 at 4767.597 kb on + strand, within IAI46_22365 at 4767.598 kb on - strand, within IAI46_22365 at 4767.598 kb on - strand, within IAI46_22365 at 4767.625 kb on + strand, within IAI46_22365 at 4767.722 kb on + strand, within IAI46_22365 at 4767.722 kb on + strand, within IAI46_22365 at 4767.727 kb on + strand, within IAI46_22365 at 4767.727 kb on + strand, within IAI46_22365 at 4767.728 kb on - strand, within IAI46_22365 at 4767.728 kb on - strand, within IAI46_22365 at 4767.728 kb on - strand, within IAI46_22365 at 4767.728 kb on - strand, within IAI46_22365 at 4767.732 kb on - strand, within IAI46_22365 at 4767.732 kb on - strand, within IAI46_22365 at 4767.732 kb on - strand, within IAI46_22365 at 4767.821 kb on - strand at 4767.840 kb on + strand at 4767.860 kb on - strand at 4767.860 kb on - strand at 4767.906 kb on + strand at 4767.906 kb on + strand at 4767.906 kb on + strand at 4767.906 kb on + strand at 4767.907 kb on - strand at 4767.941 kb on - strand at 4767.978 kb on - strand at 4768.041 kb on - strand at 4768.042 kb on + strand at 4768.058 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 50 uM, aerobic remove 4,766,205 + IAI46_22355 0.19 -1.8 4,766,205 + IAI46_22355 0.19 -0.2 4,766,207 + IAI46_22355 0.19 +0.9 4,766,207 + IAI46_22355 0.19 +0.3 4,766,207 + IAI46_22355 0.19 -0.9 4,766,208 - IAI46_22355 0.19 +0.3 4,766,208 - IAI46_22355 0.19 +0.0 4,766,208 - IAI46_22355 0.19 -1.4 4,766,208 - IAI46_22355 0.19 -0.8 4,766,208 - IAI46_22355 0.19 +0.3 4,766,303 + IAI46_22355 0.39 +0.9 4,766,394 + IAI46_22355 0.58 -0.1 4,766,394 + IAI46_22355 0.58 +0.9 4,766,394 + IAI46_22355 0.58 -0.0 4,766,395 - IAI46_22355 0.58 +0.4 4,766,395 - IAI46_22355 0.58 -0.9 4,766,395 - IAI46_22355 0.58 -0.4 4,766,397 - IAI46_22355 0.59 +0.6 4,766,435 + IAI46_22355 0.67 -0.3 4,766,436 - IAI46_22355 0.67 +0.5 4,766,436 - IAI46_22355 0.67 +1.2 4,766,441 - IAI46_22355 0.68 +0.2 4,766,441 - IAI46_22355 0.68 -0.0 4,766,453 + IAI46_22355 0.70 +0.6 4,766,453 + IAI46_22355 0.70 +0.2 4,766,454 - IAI46_22355 0.71 -0.3 4,766,454 - IAI46_22355 0.71 -0.2 4,766,460 - IAI46_22355 0.72 +0.4 4,766,486 + IAI46_22355 0.77 +0.0 4,766,487 - IAI46_22355 0.78 -0.1 4,766,573 + +0.1 4,766,574 - -0.5 4,766,662 + +0.8 4,766,729 + IAI46_22360 0.14 +0.7 4,766,830 + IAI46_22360 0.34 +0.2 4,766,878 + IAI46_22360 0.44 +0.3 4,766,878 + IAI46_22360 0.44 +0.4 4,766,879 - IAI46_22360 0.44 +0.0 4,766,879 - IAI46_22360 0.44 +0.8 4,767,063 + IAI46_22360 0.81 -0.0 4,767,063 + IAI46_22360 0.81 -0.6 4,767,064 - IAI46_22360 0.81 -0.3 4,767,064 - IAI46_22360 0.81 +0.5 4,767,081 + IAI46_22360 0.84 +0.6 4,767,106 + IAI46_22360 0.89 +0.2 4,767,106 + IAI46_22360 0.89 +0.9 4,767,106 + IAI46_22360 0.89 -0.0 4,767,107 - IAI46_22360 0.90 +0.2 4,767,124 + +0.2 4,767,125 - +0.4 4,767,152 + +0.1 4,767,153 - +0.4 4,767,153 - +0.2 4,767,153 - +0.9 4,767,166 - +0.9 4,767,166 - +0.1 4,767,166 - +0.5 4,767,250 - IAI46_22365 0.13 +0.3 4,767,250 - IAI46_22365 0.13 +0.2 4,767,250 - IAI46_22365 0.13 +1.1 4,767,250 - IAI46_22365 0.13 -0.4 4,767,250 - IAI46_22365 0.13 +0.2 4,767,250 - IAI46_22365 0.13 +0.3 4,767,293 + IAI46_22365 0.20 +1.0 4,767,294 - IAI46_22365 0.20 +1.6 4,767,363 + IAI46_22365 0.31 +2.0 4,767,363 + IAI46_22365 0.31 -0.0 4,767,463 - IAI46_22365 0.47 +0.2 4,767,574 - IAI46_22365 0.64 -0.2 4,767,587 - IAI46_22365 0.66 +1.3 4,767,597 + IAI46_22365 0.67 -0.4 4,767,598 - IAI46_22365 0.68 +0.4 4,767,598 - IAI46_22365 0.68 +0.3 4,767,625 + IAI46_22365 0.72 -0.4 4,767,722 + IAI46_22365 0.87 +1.3 4,767,722 + IAI46_22365 0.87 +0.4 4,767,727 + IAI46_22365 0.88 -0.5 4,767,727 + IAI46_22365 0.88 +0.9 4,767,728 - IAI46_22365 0.88 +0.3 4,767,728 - IAI46_22365 0.88 +0.1 4,767,728 - IAI46_22365 0.88 +0.6 4,767,728 - IAI46_22365 0.88 +0.1 4,767,732 - IAI46_22365 0.88 +0.2 4,767,732 - IAI46_22365 0.88 +0.7 4,767,732 - IAI46_22365 0.88 +0.7 4,767,821 - +0.6 4,767,840 + -1.0 4,767,860 - +0.6 4,767,860 - +2.0 4,767,906 + -0.3 4,767,906 + +0.4 4,767,906 + +0.6 4,767,906 + +1.3 4,767,907 - -0.2 4,767,941 - +2.5 4,767,978 - +0.6 4,768,041 - +0.1 4,768,042 + +0.4 4,768,058 - +0.8
Or see this region's nucleotide sequence