Experiment: Manganese (II) chloride tetrahydrate 50 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_21505 and IAI46_21510 are separated by 609 nucleotides IAI46_21510 and IAI46_21515 are separated by 647 nucleotides
IAI46_21505: IAI46_21505 - transposase, at 4,556,115 to 4,556,349
_21505
IAI46_21510: IAI46_21510 - intermembrane transport protein PqiB, at 4,556,959 to 4,558,605
_21510
IAI46_21515: IAI46_21515 - TolC family outer membrane protein, at 4,559,253 to 4,560,620
_21515
Position (kb)
4556
4557
4558
4559 Strain fitness (log2 ratio)
-1
0
1
2 at 4555.998 kb on - strand at 4556.010 kb on + strand at 4556.158 kb on + strand, within IAI46_21505 at 4556.168 kb on + strand, within IAI46_21505 at 4556.192 kb on + strand, within IAI46_21505 at 4556.193 kb on - strand, within IAI46_21505 at 4556.213 kb on + strand, within IAI46_21505 at 4556.213 kb on + strand, within IAI46_21505 at 4556.213 kb on + strand, within IAI46_21505 at 4556.213 kb on + strand, within IAI46_21505 at 4556.217 kb on - strand, within IAI46_21505 at 4556.222 kb on - strand, within IAI46_21505 at 4556.395 kb on - strand at 4556.395 kb on - strand at 4556.499 kb on - strand at 4556.725 kb on + strand at 4556.729 kb on + strand at 4556.774 kb on + strand at 4556.931 kb on + strand at 4556.971 kb on - strand at 4556.974 kb on + strand at 4557.024 kb on - strand at 4557.176 kb on + strand, within IAI46_21510 at 4557.192 kb on + strand, within IAI46_21510 at 4557.192 kb on + strand, within IAI46_21510 at 4557.231 kb on + strand, within IAI46_21510 at 4557.251 kb on + strand, within IAI46_21510 at 4557.252 kb on - strand, within IAI46_21510 at 4557.252 kb on - strand, within IAI46_21510 at 4557.281 kb on + strand, within IAI46_21510 at 4557.281 kb on + strand, within IAI46_21510 at 4557.307 kb on - strand, within IAI46_21510 at 4557.318 kb on - strand, within IAI46_21510 at 4557.341 kb on - strand, within IAI46_21510 at 4557.341 kb on - strand, within IAI46_21510 at 4557.384 kb on + strand, within IAI46_21510 at 4557.384 kb on + strand, within IAI46_21510 at 4557.384 kb on + strand, within IAI46_21510 at 4557.384 kb on + strand, within IAI46_21510 at 4557.385 kb on - strand, within IAI46_21510 at 4557.385 kb on - strand, within IAI46_21510 at 4557.385 kb on - strand, within IAI46_21510 at 4557.385 kb on - strand, within IAI46_21510 at 4557.395 kb on + strand, within IAI46_21510 at 4557.449 kb on + strand, within IAI46_21510 at 4557.474 kb on + strand, within IAI46_21510 at 4557.474 kb on + strand, within IAI46_21510 at 4557.494 kb on + strand, within IAI46_21510 at 4557.495 kb on - strand, within IAI46_21510 at 4557.495 kb on - strand, within IAI46_21510 at 4557.555 kb on - strand, within IAI46_21510 at 4557.562 kb on + strand, within IAI46_21510 at 4557.569 kb on + strand, within IAI46_21510 at 4557.569 kb on + strand, within IAI46_21510 at 4557.586 kb on + strand, within IAI46_21510 at 4557.587 kb on - strand, within IAI46_21510 at 4557.611 kb on + strand, within IAI46_21510 at 4557.611 kb on + strand, within IAI46_21510 at 4557.611 kb on + strand, within IAI46_21510 at 4557.612 kb on - strand, within IAI46_21510 at 4557.612 kb on - strand, within IAI46_21510 at 4557.692 kb on + strand, within IAI46_21510 at 4557.693 kb on - strand, within IAI46_21510 at 4557.719 kb on + strand, within IAI46_21510 at 4557.767 kb on - strand, within IAI46_21510 at 4557.808 kb on + strand, within IAI46_21510 at 4557.808 kb on + strand, within IAI46_21510 at 4557.826 kb on + strand, within IAI46_21510 at 4557.827 kb on - strand, within IAI46_21510 at 4557.852 kb on + strand, within IAI46_21510 at 4557.937 kb on - strand, within IAI46_21510 at 4557.937 kb on - strand, within IAI46_21510 at 4557.939 kb on - strand, within IAI46_21510 at 4557.939 kb on - strand, within IAI46_21510 at 4557.967 kb on - strand, within IAI46_21510 at 4558.038 kb on + strand, within IAI46_21510 at 4558.129 kb on + strand, within IAI46_21510 at 4558.130 kb on - strand, within IAI46_21510 at 4558.167 kb on - strand, within IAI46_21510 at 4558.350 kb on + strand, within IAI46_21510 at 4558.350 kb on + strand, within IAI46_21510 at 4558.350 kb on + strand, within IAI46_21510 at 4558.350 kb on + strand, within IAI46_21510 at 4558.353 kb on + strand, within IAI46_21510 at 4558.354 kb on - strand, within IAI46_21510 at 4558.356 kb on + strand, within IAI46_21510 at 4558.457 kb on - strand at 4558.476 kb on + strand at 4558.476 kb on + strand at 4558.477 kb on - strand at 4558.477 kb on - strand at 4558.627 kb on + strand at 4558.632 kb on + strand at 4558.632 kb on + strand at 4558.632 kb on + strand at 4558.633 kb on - strand at 4558.633 kb on - strand at 4558.647 kb on + strand at 4558.648 kb on - strand at 4558.652 kb on + strand at 4558.658 kb on + strand at 4558.673 kb on - strand at 4558.694 kb on - strand at 4558.707 kb on - strand at 4558.707 kb on - strand at 4558.707 kb on - strand at 4558.725 kb on + strand at 4558.759 kb on - strand at 4558.801 kb on - strand at 4558.801 kb on - strand at 4558.822 kb on - strand at 4558.859 kb on + strand at 4558.859 kb on + strand at 4558.860 kb on - strand at 4558.869 kb on - strand at 4558.869 kb on - strand at 4558.877 kb on + strand at 4558.877 kb on + strand at 4558.877 kb on + strand at 4558.878 kb on - strand at 4558.878 kb on - strand at 4558.907 kb on + strand at 4558.908 kb on - strand at 4558.968 kb on + strand at 4558.968 kb on + strand at 4558.968 kb on + strand at 4558.968 kb on + strand at 4558.969 kb on - strand at 4558.969 kb on - strand at 4558.969 kb on - strand at 4558.969 kb on - strand at 4558.969 kb on - strand at 4558.969 kb on - strand at 4558.973 kb on + strand at 4558.974 kb on - strand at 4558.974 kb on - strand at 4559.185 kb on - strand at 4559.219 kb on + strand at 4559.219 kb on + strand at 4559.219 kb on + strand at 4559.219 kb on + strand at 4559.219 kb on + strand at 4559.220 kb on - strand at 4559.220 kb on - strand at 4559.220 kb on - strand at 4559.220 kb on - strand at 4559.220 kb on - strand at 4559.220 kb on - strand at 4559.221 kb on + strand at 4559.221 kb on + strand at 4559.221 kb on + strand at 4559.221 kb on + strand at 4559.222 kb on - strand at 4559.222 kb on - strand at 4559.222 kb on - strand at 4559.222 kb on - strand at 4559.222 kb on - strand at 4559.243 kb on + strand at 4559.243 kb on + strand at 4559.244 kb on - strand at 4559.247 kb on + strand at 4559.248 kb on - strand at 4559.339 kb on - strand at 4559.344 kb on + strand at 4559.344 kb on + strand at 4559.344 kb on + strand at 4559.345 kb on - strand at 4559.345 kb on - strand at 4559.360 kb on - strand at 4559.377 kb on + strand at 4559.377 kb on + strand at 4559.377 kb on + strand at 4559.378 kb on - strand at 4559.412 kb on + strand, within IAI46_21515 at 4559.459 kb on + strand, within IAI46_21515 at 4559.460 kb on - strand, within IAI46_21515 at 4559.460 kb on - strand, within IAI46_21515 at 4559.478 kb on + strand, within IAI46_21515 at 4559.479 kb on - strand, within IAI46_21515 at 4559.486 kb on - strand, within IAI46_21515 at 4559.547 kb on + strand, within IAI46_21515 at 4559.575 kb on + strand, within IAI46_21515
Per-strain Table
Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 50 uM, aerobic remove 4,555,998 - -0.1 4,556,010 + -0.1 4,556,158 + IAI46_21505 0.18 +0.3 4,556,168 + IAI46_21505 0.23 -0.0 4,556,192 + IAI46_21505 0.33 +0.6 4,556,193 - IAI46_21505 0.33 +0.3 4,556,213 + IAI46_21505 0.42 -1.2 4,556,213 + IAI46_21505 0.42 +1.2 4,556,213 + IAI46_21505 0.42 +0.9 4,556,213 + IAI46_21505 0.42 +0.4 4,556,217 - IAI46_21505 0.43 +0.7 4,556,222 - IAI46_21505 0.46 +0.4 4,556,395 - +0.1 4,556,395 - -0.5 4,556,499 - +0.8 4,556,725 + +0.5 4,556,729 + +0.2 4,556,774 + +0.3 4,556,931 + -0.5 4,556,971 - -0.7 4,556,974 + +0.4 4,557,024 - +1.0 4,557,176 + IAI46_21510 0.13 +2.2 4,557,192 + IAI46_21510 0.14 +0.4 4,557,192 + IAI46_21510 0.14 +0.7 4,557,231 + IAI46_21510 0.17 -0.5 4,557,251 + IAI46_21510 0.18 -0.2 4,557,252 - IAI46_21510 0.18 -0.8 4,557,252 - IAI46_21510 0.18 +0.9 4,557,281 + IAI46_21510 0.20 +0.8 4,557,281 + IAI46_21510 0.20 +0.1 4,557,307 - IAI46_21510 0.21 -0.3 4,557,318 - IAI46_21510 0.22 +0.1 4,557,341 - IAI46_21510 0.23 +0.5 4,557,341 - IAI46_21510 0.23 +0.2 4,557,384 + IAI46_21510 0.26 +0.9 4,557,384 + IAI46_21510 0.26 +0.6 4,557,384 + IAI46_21510 0.26 +0.2 4,557,384 + IAI46_21510 0.26 -0.1 4,557,385 - IAI46_21510 0.26 +0.1 4,557,385 - IAI46_21510 0.26 +0.7 4,557,385 - IAI46_21510 0.26 +0.2 4,557,385 - IAI46_21510 0.26 -0.1 4,557,395 + IAI46_21510 0.26 +1.8 4,557,449 + IAI46_21510 0.30 -0.4 4,557,474 + IAI46_21510 0.31 -0.8 4,557,474 + IAI46_21510 0.31 +0.2 4,557,494 + IAI46_21510 0.32 +0.3 4,557,495 - IAI46_21510 0.33 -0.1 4,557,495 - IAI46_21510 0.33 +0.7 4,557,555 - IAI46_21510 0.36 -0.5 4,557,562 + IAI46_21510 0.37 +0.1 4,557,569 + IAI46_21510 0.37 +0.0 4,557,569 + IAI46_21510 0.37 -0.7 4,557,586 + IAI46_21510 0.38 -0.7 4,557,587 - IAI46_21510 0.38 -1.1 4,557,611 + IAI46_21510 0.40 -0.7 4,557,611 + IAI46_21510 0.40 +0.3 4,557,611 + IAI46_21510 0.40 +0.3 4,557,612 - IAI46_21510 0.40 +0.5 4,557,612 - IAI46_21510 0.40 +0.3 4,557,692 + IAI46_21510 0.45 +0.7 4,557,693 - IAI46_21510 0.45 +0.4 4,557,719 + IAI46_21510 0.46 +1.1 4,557,767 - IAI46_21510 0.49 -0.0 4,557,808 + IAI46_21510 0.52 +0.7 4,557,808 + IAI46_21510 0.52 +0.1 4,557,826 + IAI46_21510 0.53 +0.2 4,557,827 - IAI46_21510 0.53 -1.3 4,557,852 + IAI46_21510 0.54 +0.5 4,557,937 - IAI46_21510 0.59 +0.9 4,557,937 - IAI46_21510 0.59 -0.1 4,557,939 - IAI46_21510 0.60 +0.3 4,557,939 - IAI46_21510 0.60 +0.6 4,557,967 - IAI46_21510 0.61 +0.2 4,558,038 + IAI46_21510 0.66 -0.3 4,558,129 + IAI46_21510 0.71 +0.7 4,558,130 - IAI46_21510 0.71 +1.3 4,558,167 - IAI46_21510 0.73 +0.6 4,558,350 + IAI46_21510 0.84 +0.5 4,558,350 + IAI46_21510 0.84 +0.2 4,558,350 + IAI46_21510 0.84 +0.2 4,558,350 + IAI46_21510 0.84 +0.5 4,558,353 + IAI46_21510 0.85 +0.0 4,558,354 - IAI46_21510 0.85 +0.5 4,558,356 + IAI46_21510 0.85 -0.9 4,558,457 - +0.3 4,558,476 + +0.3 4,558,476 + +0.4 4,558,477 - +0.8 4,558,477 - -1.1 4,558,627 + +0.1 4,558,632 + +1.6 4,558,632 + -0.3 4,558,632 + -0.0 4,558,633 - -0.2 4,558,633 - +0.7 4,558,647 + -0.0 4,558,648 - +0.5 4,558,652 + -0.2 4,558,658 + -0.2 4,558,673 - +0.0 4,558,694 - -0.2 4,558,707 - +0.0 4,558,707 - +0.1 4,558,707 - +0.3 4,558,725 + -0.5 4,558,759 - +0.2 4,558,801 - +0.6 4,558,801 - +0.4 4,558,822 - -0.1 4,558,859 + +0.6 4,558,859 + -0.5 4,558,860 - +0.5 4,558,869 - -0.8 4,558,869 - +0.8 4,558,877 + -0.2 4,558,877 + +1.8 4,558,877 + -0.2 4,558,878 - -0.3 4,558,878 - +0.7 4,558,907 + -0.5 4,558,908 - -0.4 4,558,968 + +0.2 4,558,968 + -0.4 4,558,968 + +1.3 4,558,968 + +0.9 4,558,969 - -1.1 4,558,969 - -1.2 4,558,969 - +0.2 4,558,969 - +0.2 4,558,969 - +0.7 4,558,969 - -0.3 4,558,973 + +0.3 4,558,974 - +0.4 4,558,974 - +0.2 4,559,185 - +0.4 4,559,219 + -0.4 4,559,219 + +0.6 4,559,219 + +0.8 4,559,219 + -0.8 4,559,219 + +1.2 4,559,220 - +0.3 4,559,220 - +0.2 4,559,220 - +0.6 4,559,220 - +0.7 4,559,220 - +0.4 4,559,220 - -0.5 4,559,221 + +0.9 4,559,221 + +0.6 4,559,221 + +0.5 4,559,221 + +0.2 4,559,222 - +0.3 4,559,222 - -0.0 4,559,222 - +0.1 4,559,222 - -0.7 4,559,222 - +0.4 4,559,243 + -0.0 4,559,243 + +0.2 4,559,244 - +0.8 4,559,247 + -0.1 4,559,248 - +0.4 4,559,339 - +0.8 4,559,344 + +0.1 4,559,344 + +0.2 4,559,344 + -0.1 4,559,345 - -0.0 4,559,345 - -0.4 4,559,360 - -0.4 4,559,377 + +0.1 4,559,377 + -0.0 4,559,377 + +0.5 4,559,378 - -0.1 4,559,412 + IAI46_21515 0.12 +0.6 4,559,459 + IAI46_21515 0.15 +1.1 4,559,460 - IAI46_21515 0.15 +1.0 4,559,460 - IAI46_21515 0.15 +0.4 4,559,478 + IAI46_21515 0.16 +0.3 4,559,479 - IAI46_21515 0.17 +0.3 4,559,486 - IAI46_21515 0.17 +0.5 4,559,547 + IAI46_21515 0.21 +0.3 4,559,575 + IAI46_21515 0.24 +0.7
Or see this region's nucleotide sequence