Experiment: Manganese (II) chloride tetrahydrate 50 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_19535 and IAI46_19540 are separated by 73 nucleotides IAI46_19540 and IAI46_19545 are separated by 8 nucleotides IAI46_19545 and IAI46_19550 overlap by 4 nucleotides IAI46_19550 and IAI46_19555 are separated by 182 nucleotides
IAI46_19535: IAI46_19535 - pyridoxine 5'-phosphate synthase, at 4,129,346 to 4,130,077
_19535
IAI46_19540: IAI46_19540 - DNA repair protein RecO, at 4,130,151 to 4,130,882
_19540
IAI46_19545: IAI46_19545 - GTPase Era, at 4,130,891 to 4,131,799
_19545
IAI46_19550: IAI46_19550 - ribonuclease III, at 4,131,796 to 4,132,476
_19550
IAI46_19555: IAI46_19555 - signal peptidase I, at 4,132,659 to 4,133,636
_19555
Position (kb)
4130
4131
4132 Strain fitness (log2 ratio)
-2
-1
0
1 at 4130.172 kb on - strand at 4130.341 kb on + strand, within IAI46_19540 at 4130.392 kb on + strand, within IAI46_19540 at 4130.399 kb on + strand, within IAI46_19540 at 4130.399 kb on + strand, within IAI46_19540 at 4130.399 kb on + strand, within IAI46_19540 at 4130.399 kb on + strand, within IAI46_19540 at 4130.400 kb on - strand, within IAI46_19540 at 4130.453 kb on - strand, within IAI46_19540 at 4130.546 kb on - strand, within IAI46_19540 at 4130.559 kb on + strand, within IAI46_19540 at 4130.566 kb on + strand, within IAI46_19540 at 4130.566 kb on + strand, within IAI46_19540 at 4130.624 kb on - strand, within IAI46_19540 at 4130.624 kb on - strand, within IAI46_19540 at 4130.646 kb on + strand, within IAI46_19540 at 4130.647 kb on - strand, within IAI46_19540 at 4130.647 kb on - strand, within IAI46_19540 at 4130.647 kb on - strand, within IAI46_19540 at 4130.652 kb on + strand, within IAI46_19540 at 4130.653 kb on - strand, within IAI46_19540 at 4130.653 kb on - strand, within IAI46_19540 at 4130.713 kb on - strand, within IAI46_19540 at 4130.713 kb on - strand, within IAI46_19540 at 4130.813 kb on + strand at 4130.839 kb on + strand at 4130.839 kb on + strand at 4130.839 kb on + strand at 4130.840 kb on - strand at 4130.840 kb on - strand at 4130.893 kb on - strand at 4130.893 kb on - strand at 4130.893 kb on - strand at 4132.488 kb on - strand at 4132.494 kb on - strand at 4132.519 kb on - strand at 4132.635 kb on - strand at 4132.648 kb on + strand at 4132.648 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 50 uM, aerobic remove 4,130,172 - +0.4 4,130,341 + IAI46_19540 0.26 -0.7 4,130,392 + IAI46_19540 0.33 -0.4 4,130,399 + IAI46_19540 0.34 -0.8 4,130,399 + IAI46_19540 0.34 -1.1 4,130,399 + IAI46_19540 0.34 -1.6 4,130,399 + IAI46_19540 0.34 -0.4 4,130,400 - IAI46_19540 0.34 +0.6 4,130,453 - IAI46_19540 0.41 +0.6 4,130,546 - IAI46_19540 0.54 +0.6 4,130,559 + IAI46_19540 0.56 +1.3 4,130,566 + IAI46_19540 0.57 -0.0 4,130,566 + IAI46_19540 0.57 -0.3 4,130,624 - IAI46_19540 0.65 -0.3 4,130,624 - IAI46_19540 0.65 +0.1 4,130,646 + IAI46_19540 0.68 -0.0 4,130,647 - IAI46_19540 0.68 +0.3 4,130,647 - IAI46_19540 0.68 -0.6 4,130,647 - IAI46_19540 0.68 +0.6 4,130,652 + IAI46_19540 0.68 -0.8 4,130,653 - IAI46_19540 0.69 +0.8 4,130,653 - IAI46_19540 0.69 -0.1 4,130,713 - IAI46_19540 0.77 -0.2 4,130,713 - IAI46_19540 0.77 +0.1 4,130,813 + -1.6 4,130,839 + -1.4 4,130,839 + -0.8 4,130,839 + -1.3 4,130,840 - +0.2 4,130,840 - +0.1 4,130,893 - -0.8 4,130,893 - -0.2 4,130,893 - +1.2 4,132,488 - -1.0 4,132,494 - +0.2 4,132,519 - -2.2 4,132,635 - -1.0 4,132,648 + -0.1 4,132,648 + +0.5
Or see this region's nucleotide sequence