Experiment: Manganese (II) chloride tetrahydrate 50 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_19320 and IAI46_19325 are separated by 83 nucleotides IAI46_19325 and IAI46_19330 are separated by 32 nucleotides IAI46_19330 and IAI46_19335 are separated by 2 nucleotides
IAI46_19320: IAI46_19320 - aminopeptidase PepB, at 4,078,676 to 4,079,971
_19320
IAI46_19325: IAI46_19325 - Fe-S cluster assembly protein IscX, at 4,080,055 to 4,080,255
_19325
IAI46_19330: IAI46_19330 - ISC system 2Fe-2S type ferredoxin, at 4,080,288 to 4,080,623
_19330
IAI46_19335: IAI46_19335 - Fe-S protein assembly chaperone HscA, at 4,080,626 to 4,082,476
_19335
Position (kb)
4080
4081 Strain fitness (log2 ratio)
-2
-1
0
1 at 4079.121 kb on - strand, within IAI46_19320 at 4079.173 kb on + strand, within IAI46_19320 at 4079.238 kb on + strand, within IAI46_19320 at 4079.294 kb on - strand, within IAI46_19320 at 4079.294 kb on - strand, within IAI46_19320 at 4079.335 kb on + strand, within IAI46_19320 at 4079.405 kb on + strand, within IAI46_19320 at 4079.491 kb on + strand, within IAI46_19320 at 4079.499 kb on + strand, within IAI46_19320 at 4079.534 kb on - strand, within IAI46_19320 at 4079.538 kb on + strand, within IAI46_19320 at 4079.624 kb on - strand, within IAI46_19320 at 4079.624 kb on - strand, within IAI46_19320 at 4079.948 kb on + strand at 4079.972 kb on - strand at 4079.990 kb on + strand at 4079.991 kb on - strand at 4080.002 kb on - strand at 4080.002 kb on - strand at 4080.034 kb on + strand at 4080.053 kb on - strand at 4080.057 kb on - strand at 4080.070 kb on + strand at 4080.097 kb on + strand, within IAI46_19325 at 4080.192 kb on + strand, within IAI46_19325 at 4080.210 kb on - strand, within IAI46_19325 at 4080.210 kb on - strand, within IAI46_19325 at 4080.256 kb on + strand at 4080.256 kb on + strand at 4080.259 kb on + strand at 4080.259 kb on + strand at 4080.289 kb on + strand at 4080.314 kb on + strand at 4080.315 kb on - strand at 4080.316 kb on + strand at 4080.519 kb on - strand, within IAI46_19330 at 4080.589 kb on - strand, within IAI46_19330 at 4080.589 kb on - strand, within IAI46_19330 at 4080.627 kb on + strand at 4080.627 kb on + strand at 4080.628 kb on - strand at 4080.628 kb on - strand at 4080.714 kb on - strand at 4080.714 kb on - strand at 4080.714 kb on - strand at 4080.714 kb on - strand at 4080.983 kb on - strand, within IAI46_19335 at 4081.110 kb on - strand, within IAI46_19335
Per-strain Table
Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 50 uM, aerobic remove 4,079,121 - IAI46_19320 0.34 +0.4 4,079,173 + IAI46_19320 0.38 +0.5 4,079,238 + IAI46_19320 0.43 +0.1 4,079,294 - IAI46_19320 0.48 -1.5 4,079,294 - IAI46_19320 0.48 -0.1 4,079,335 + IAI46_19320 0.51 +0.2 4,079,405 + IAI46_19320 0.56 -0.3 4,079,491 + IAI46_19320 0.63 -0.3 4,079,499 + IAI46_19320 0.64 +0.1 4,079,534 - IAI46_19320 0.66 -0.1 4,079,538 + IAI46_19320 0.67 +0.8 4,079,624 - IAI46_19320 0.73 +0.7 4,079,624 - IAI46_19320 0.73 -0.6 4,079,948 + +0.2 4,079,972 - +0.1 4,079,990 + +0.0 4,079,991 - -0.2 4,080,002 - -1.1 4,080,002 - -0.0 4,080,034 + +0.3 4,080,053 - +0.5 4,080,057 - +1.0 4,080,070 + +0.1 4,080,097 + IAI46_19325 0.21 +0.5 4,080,192 + IAI46_19325 0.68 +0.3 4,080,210 - IAI46_19325 0.77 +0.9 4,080,210 - IAI46_19325 0.77 +0.1 4,080,256 + +0.6 4,080,256 + -0.9 4,080,259 + +0.5 4,080,259 + +0.9 4,080,289 + +0.4 4,080,314 + +0.6 4,080,315 - -1.9 4,080,316 + -0.6 4,080,519 - IAI46_19330 0.69 -0.1 4,080,589 - IAI46_19330 0.90 -0.4 4,080,589 - IAI46_19330 0.90 +0.1 4,080,627 + +1.1 4,080,627 + +0.0 4,080,628 - -0.2 4,080,628 - -0.1 4,080,714 - -0.4 4,080,714 - -0.6 4,080,714 - +0.9 4,080,714 - +0.1 4,080,983 - IAI46_19335 0.19 +0.8 4,081,110 - IAI46_19335 0.26 -1.0
Or see this region's nucleotide sequence