Experiment: Manganese (II) chloride tetrahydrate 50 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_17690 and IAI46_17695 overlap by 4 nucleotides IAI46_17695 and IAI46_17700 are separated by 50 nucleotides
IAI46_17690: IAI46_17690 - NADH-quinone oxidoreductase subunit NuoF, at 3,728,404 to 3,729,756
_17690
IAI46_17695: IAI46_17695 - NADH-quinone oxidoreductase subunit NuoE, at 3,729,753 to 3,730,256
_17695
IAI46_17700: IAI46_17700 - NADH-quinone oxidoreductase subunit C/D, at 3,730,307 to 3,732,103
_17700
Position (kb)
3729
3730
3731 Strain fitness (log2 ratio)
-1
0
1
2
3 at 3728.919 kb on - strand, within IAI46_17690 at 3729.098 kb on - strand, within IAI46_17690 at 3729.192 kb on + strand, within IAI46_17690 at 3729.193 kb on - strand, within IAI46_17690 at 3729.347 kb on + strand, within IAI46_17690 at 3729.366 kb on + strand, within IAI46_17690 at 3729.366 kb on + strand, within IAI46_17690 at 3729.366 kb on + strand, within IAI46_17690 at 3729.367 kb on - strand, within IAI46_17690 at 3729.369 kb on - strand, within IAI46_17690 at 3729.458 kb on + strand, within IAI46_17690 at 3729.459 kb on - strand, within IAI46_17690 at 3729.739 kb on + strand at 3729.739 kb on + strand at 3729.740 kb on - strand at 3729.740 kb on - strand at 3729.740 kb on - strand at 3729.760 kb on + strand at 3729.772 kb on - strand at 3730.028 kb on - strand, within IAI46_17695 at 3730.048 kb on - strand, within IAI46_17695 at 3730.168 kb on + strand, within IAI46_17695 at 3730.305 kb on - strand at 3730.340 kb on - strand at 3730.340 kb on - strand at 3730.427 kb on + strand at 3730.473 kb on + strand at 3730.474 kb on - strand at 3730.474 kb on - strand at 3730.474 kb on - strand at 3730.698 kb on - strand, within IAI46_17700 at 3730.698 kb on - strand, within IAI46_17700 at 3730.870 kb on - strand, within IAI46_17700 at 3730.929 kb on + strand, within IAI46_17700 at 3730.930 kb on - strand, within IAI46_17700 at 3731.039 kb on - strand, within IAI46_17700 at 3731.138 kb on - strand, within IAI46_17700 at 3731.146 kb on - strand, within IAI46_17700
Per-strain Table
Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 50 uM, aerobic remove 3,728,919 - IAI46_17690 0.38 +1.4 3,729,098 - IAI46_17690 0.51 -0.5 3,729,192 + IAI46_17690 0.58 +0.2 3,729,193 - IAI46_17690 0.58 +1.8 3,729,347 + IAI46_17690 0.70 -0.0 3,729,366 + IAI46_17690 0.71 -0.4 3,729,366 + IAI46_17690 0.71 +0.3 3,729,366 + IAI46_17690 0.71 +0.5 3,729,367 - IAI46_17690 0.71 -0.7 3,729,369 - IAI46_17690 0.71 +0.6 3,729,458 + IAI46_17690 0.78 -0.9 3,729,459 - IAI46_17690 0.78 -0.8 3,729,739 + +1.1 3,729,739 + +0.2 3,729,740 - +1.8 3,729,740 - -0.7 3,729,740 - -0.8 3,729,760 + -0.2 3,729,772 - +0.6 3,730,028 - IAI46_17695 0.55 +1.2 3,730,048 - IAI46_17695 0.59 +0.8 3,730,168 + IAI46_17695 0.82 +0.2 3,730,305 - -0.8 3,730,340 - +1.4 3,730,340 - +0.5 3,730,427 + -0.6 3,730,473 + +3.1 3,730,474 - +0.2 3,730,474 - +1.5 3,730,474 - -0.8 3,730,698 - IAI46_17700 0.22 +0.4 3,730,698 - IAI46_17700 0.22 -0.8 3,730,870 - IAI46_17700 0.31 +0.3 3,730,929 + IAI46_17700 0.35 -0.5 3,730,930 - IAI46_17700 0.35 -0.1 3,731,039 - IAI46_17700 0.41 +0.8 3,731,138 - IAI46_17700 0.46 -0.0 3,731,146 - IAI46_17700 0.47 -1.3
Or see this region's nucleotide sequence