Experiment: Manganese (II) chloride tetrahydrate 50 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_17510 and IAI46_17515 are separated by 3 nucleotides IAI46_17515 and IAI46_17520 are separated by 294 nucleotides
IAI46_17510: IAI46_17510 - ribonucleotide-diphosphate reductase subunit beta, at 3,681,491 to 3,682,621
_17510
IAI46_17515: IAI46_17515 - 2Fe-2S ferredoxin-like protein, at 3,682,625 to 3,682,885
_17515
IAI46_17520: IAI46_17520 - nicotinamide mononucleotide deamidase-related protein YfaY, at 3,683,180 to 3,684,376
_17520
Position (kb)
3682
3683 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3682.652 kb on - strand, within IAI46_17515 at 3682.734 kb on - strand, within IAI46_17515 at 3682.734 kb on - strand, within IAI46_17515 at 3682.780 kb on - strand, within IAI46_17515 at 3682.916 kb on - strand at 3682.917 kb on + strand at 3682.917 kb on + strand at 3682.917 kb on + strand at 3682.917 kb on + strand at 3682.917 kb on + strand at 3682.917 kb on - strand at 3682.918 kb on - strand at 3682.922 kb on + strand at 3682.936 kb on + strand at 3682.972 kb on + strand at 3682.975 kb on - strand at 3682.997 kb on - strand at 3683.082 kb on + strand at 3683.113 kb on + strand at 3683.114 kb on - strand at 3683.226 kb on - strand at 3683.261 kb on + strand at 3683.302 kb on + strand, within IAI46_17520 at 3683.324 kb on + strand, within IAI46_17520 at 3683.325 kb on - strand, within IAI46_17520 at 3683.354 kb on - strand, within IAI46_17520 at 3683.354 kb on - strand, within IAI46_17520 at 3683.354 kb on - strand, within IAI46_17520 at 3683.354 kb on - strand, within IAI46_17520 at 3683.420 kb on + strand, within IAI46_17520 at 3683.641 kb on + strand, within IAI46_17520 at 3683.642 kb on - strand, within IAI46_17520 at 3683.812 kb on + strand, within IAI46_17520 at 3683.852 kb on + strand, within IAI46_17520 at 3683.853 kb on - strand, within IAI46_17520 at 3683.858 kb on - strand, within IAI46_17520
Per-strain Table
Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 50 uM, aerobic remove 3,682,652 - IAI46_17515 0.10 -0.1 3,682,734 - IAI46_17515 0.42 +0.2 3,682,734 - IAI46_17515 0.42 +0.8 3,682,780 - IAI46_17515 0.59 -1.2 3,682,916 - +2.0 3,682,917 + +0.5 3,682,917 + -0.3 3,682,917 + +0.9 3,682,917 + -0.2 3,682,917 + +0.6 3,682,917 - -0.3 3,682,918 - -0.0 3,682,922 + -1.1 3,682,936 + +0.2 3,682,972 + +0.5 3,682,975 - -0.3 3,682,997 - +0.9 3,683,082 + +0.2 3,683,113 + +0.8 3,683,114 - -0.8 3,683,226 - +0.2 3,683,261 + -0.4 3,683,302 + IAI46_17520 0.10 +0.3 3,683,324 + IAI46_17520 0.12 +0.4 3,683,325 - IAI46_17520 0.12 -0.2 3,683,354 - IAI46_17520 0.15 -0.2 3,683,354 - IAI46_17520 0.15 +0.3 3,683,354 - IAI46_17520 0.15 -1.2 3,683,354 - IAI46_17520 0.15 -0.2 3,683,420 + IAI46_17520 0.20 -2.2 3,683,641 + IAI46_17520 0.39 -0.2 3,683,642 - IAI46_17520 0.39 +0.8 3,683,812 + IAI46_17520 0.53 +0.4 3,683,852 + IAI46_17520 0.56 -0.2 3,683,853 - IAI46_17520 0.56 +0.9 3,683,858 - IAI46_17520 0.57 -0.2
Or see this region's nucleotide sequence