Experiment: Manganese (II) chloride tetrahydrate 50 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_13890 and IAI46_13895 are separated by 48 nucleotides IAI46_13895 and IAI46_13900 are separated by 50 nucleotides
IAI46_13890: IAI46_13890 - formate C-acetyltransferase/glycerol dehydratase family glycyl radical enzyme, at 2,950,884 to 2,953,316
_13890
IAI46_13895: IAI46_13895 - DeoR/GlpR transcriptional regulator, at 2,953,365 to 2,954,111
_13895
IAI46_13900: IAI46_13900 - L-ribulose-5-phosphate 4-epimerase, at 2,954,162 to 2,954,857
_13900
Position (kb)
2953
2954
2955 Strain fitness (log2 ratio)
-1
0
1 at 2952.414 kb on + strand, within IAI46_13890 at 2952.460 kb on + strand, within IAI46_13890 at 2952.460 kb on + strand, within IAI46_13890 at 2952.460 kb on + strand, within IAI46_13890 at 2952.581 kb on - strand, within IAI46_13890 at 2952.735 kb on + strand, within IAI46_13890 at 2952.789 kb on + strand, within IAI46_13890 at 2952.789 kb on + strand, within IAI46_13890 at 2952.792 kb on - strand, within IAI46_13890 at 2952.811 kb on - strand, within IAI46_13890 at 2952.852 kb on + strand, within IAI46_13890 at 2952.852 kb on + strand, within IAI46_13890 at 2952.855 kb on + strand, within IAI46_13890 at 2953.137 kb on + strand at 2953.138 kb on - strand at 2953.159 kb on - strand at 2953.159 kb on - strand at 2953.264 kb on + strand at 2953.286 kb on + strand at 2953.308 kb on - strand at 2953.308 kb on - strand at 2953.310 kb on + strand at 2953.326 kb on - strand at 2953.387 kb on + strand at 2953.388 kb on - strand at 2953.535 kb on - strand, within IAI46_13895 at 2953.600 kb on - strand, within IAI46_13895 at 2953.688 kb on + strand, within IAI46_13895 at 2953.719 kb on + strand, within IAI46_13895 at 2953.776 kb on + strand, within IAI46_13895 at 2953.880 kb on + strand, within IAI46_13895 at 2953.994 kb on + strand, within IAI46_13895 at 2954.087 kb on - strand at 2954.186 kb on - strand at 2954.186 kb on - strand at 2954.202 kb on + strand at 2954.231 kb on - strand at 2954.580 kb on - strand, within IAI46_13900 at 2954.716 kb on - strand, within IAI46_13900 at 2954.832 kb on - strand at 2954.851 kb on + strand at 2954.852 kb on - strand at 2954.916 kb on - strand at 2954.980 kb on + strand at 2954.984 kb on + strand at 2955.001 kb on + strand at 2955.040 kb on - strand at 2955.040 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 50 uM, aerobic remove 2,952,414 + IAI46_13890 0.63 +0.0 2,952,460 + IAI46_13890 0.65 +1.1 2,952,460 + IAI46_13890 0.65 +1.1 2,952,460 + IAI46_13890 0.65 +0.1 2,952,581 - IAI46_13890 0.70 +0.4 2,952,735 + IAI46_13890 0.76 +0.1 2,952,789 + IAI46_13890 0.78 +0.5 2,952,789 + IAI46_13890 0.78 -1.1 2,952,792 - IAI46_13890 0.78 +0.6 2,952,811 - IAI46_13890 0.79 -0.1 2,952,852 + IAI46_13890 0.81 -1.1 2,952,852 + IAI46_13890 0.81 +0.6 2,952,855 + IAI46_13890 0.81 +0.3 2,953,137 + +0.2 2,953,138 - +0.5 2,953,159 - -0.1 2,953,159 - -0.6 2,953,264 + +1.1 2,953,286 + -0.0 2,953,308 - -0.7 2,953,308 - -1.2 2,953,310 + -0.5 2,953,326 - -0.3 2,953,387 + +0.2 2,953,388 - +1.0 2,953,535 - IAI46_13895 0.23 +0.6 2,953,600 - IAI46_13895 0.31 -0.7 2,953,688 + IAI46_13895 0.43 -0.3 2,953,719 + IAI46_13895 0.47 +0.8 2,953,776 + IAI46_13895 0.55 -0.8 2,953,880 + IAI46_13895 0.69 -1.2 2,953,994 + IAI46_13895 0.84 -0.9 2,954,087 - -0.4 2,954,186 - +1.6 2,954,186 - +0.8 2,954,202 + -0.9 2,954,231 - -0.8 2,954,580 - IAI46_13900 0.60 -0.2 2,954,716 - IAI46_13900 0.80 -0.3 2,954,832 - -0.4 2,954,851 + +0.3 2,954,852 - +0.9 2,954,916 - +1.4 2,954,980 + -0.0 2,954,984 + +0.0 2,955,001 + -0.1 2,955,040 - +0.6 2,955,040 - +0.5
Or see this region's nucleotide sequence