Experiment: Manganese (II) chloride tetrahydrate 50 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_13395 and IAI46_13400 are separated by 34 nucleotides IAI46_13400 and IAI46_13405 are separated by 34 nucleotides IAI46_13405 and IAI46_13410 are separated by 59 nucleotides IAI46_13410 and IAI46_13415 are separated by 92 nucleotides IAI46_13415 and IAI46_13420 are separated by 306 nucleotides
IAI46_13395: IAI46_13395 - copper-translocating P-type ATPase, at 2,863,522 to 2,866,062
_13395
IAI46_13400: IAI46_13400 - glutaredoxin family protein, at 2,866,097 to 2,866,405
_13400
IAI46_13405: IAI46_13405 - Cu(I)-responsive transcriptional regulator, at 2,866,440 to 2,866,940
_13405
IAI46_13410: IAI46_13410 - heavy-metal-associated domain-containing protein, at 2,867,000 to 2,867,200
_13410
IAI46_13415: IAI46_13415 - DUF1471 domain-containing protein, at 2,867,293 to 2,867,553
_13415
IAI46_13420: IAI46_13420 - tRNA 2-thiocytidine(32) synthetase TtcA, at 2,867,860 to 2,868,792
_13420
Position (kb)
2866
2867
2868 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2866.052 kb on + strand at 2866.131 kb on - strand, within IAI46_13400 at 2866.131 kb on - strand, within IAI46_13400 at 2866.257 kb on + strand, within IAI46_13400 at 2866.258 kb on - strand, within IAI46_13400 at 2866.258 kb on - strand, within IAI46_13400 at 2866.258 kb on - strand, within IAI46_13400 at 2866.258 kb on - strand, within IAI46_13400 at 2866.258 kb on - strand, within IAI46_13400 at 2866.258 kb on - strand, within IAI46_13400 at 2866.261 kb on + strand, within IAI46_13400 at 2866.307 kb on + strand, within IAI46_13400 at 2866.413 kb on + strand at 2866.497 kb on + strand, within IAI46_13405 at 2866.554 kb on + strand, within IAI46_13405 at 2866.570 kb on + strand, within IAI46_13405 at 2866.570 kb on + strand, within IAI46_13405 at 2866.570 kb on + strand, within IAI46_13405 at 2866.571 kb on - strand, within IAI46_13405 at 2866.586 kb on + strand, within IAI46_13405 at 2866.680 kb on - strand, within IAI46_13405 at 2866.886 kb on + strand, within IAI46_13405 at 2866.887 kb on - strand, within IAI46_13405 at 2866.999 kb on + strand at 2867.439 kb on + strand, within IAI46_13415 at 2867.444 kb on + strand, within IAI46_13415 at 2867.552 kb on - strand at 2867.651 kb on + strand at 2867.675 kb on + strand at 2867.811 kb on + strand at 2867.880 kb on + strand at 2867.896 kb on + strand at 2867.897 kb on - strand at 2868.006 kb on + strand, within IAI46_13420 at 2868.016 kb on + strand, within IAI46_13420 at 2868.016 kb on + strand, within IAI46_13420 at 2868.017 kb on - strand, within IAI46_13420 at 2868.120 kb on + strand, within IAI46_13420 at 2868.181 kb on + strand, within IAI46_13420 at 2868.181 kb on + strand, within IAI46_13420
Per-strain Table
Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 50 uM, aerobic remove 2,866,052 + -0.7 2,866,131 - IAI46_13400 0.11 -0.1 2,866,131 - IAI46_13400 0.11 +0.2 2,866,257 + IAI46_13400 0.52 +0.1 2,866,258 - IAI46_13400 0.52 -0.8 2,866,258 - IAI46_13400 0.52 +1.3 2,866,258 - IAI46_13400 0.52 -0.3 2,866,258 - IAI46_13400 0.52 +1.3 2,866,258 - IAI46_13400 0.52 -0.3 2,866,258 - IAI46_13400 0.52 +0.8 2,866,261 + IAI46_13400 0.53 -0.9 2,866,307 + IAI46_13400 0.68 +1.6 2,866,413 + -0.8 2,866,497 + IAI46_13405 0.11 +1.5 2,866,554 + IAI46_13405 0.23 +1.6 2,866,570 + IAI46_13405 0.26 +0.7 2,866,570 + IAI46_13405 0.26 -0.1 2,866,570 + IAI46_13405 0.26 -0.1 2,866,571 - IAI46_13405 0.26 -0.0 2,866,586 + IAI46_13405 0.29 -0.2 2,866,680 - IAI46_13405 0.48 +0.5 2,866,886 + IAI46_13405 0.89 +1.3 2,866,887 - IAI46_13405 0.89 +1.3 2,866,999 + +0.2 2,867,439 + IAI46_13415 0.56 +1.0 2,867,444 + IAI46_13415 0.58 -0.2 2,867,552 - -0.3 2,867,651 + +0.1 2,867,675 + +2.0 2,867,811 + +0.1 2,867,880 + +0.3 2,867,896 + +0.8 2,867,897 - -0.1 2,868,006 + IAI46_13420 0.16 +0.3 2,868,016 + IAI46_13420 0.17 -1.5 2,868,016 + IAI46_13420 0.17 -0.3 2,868,017 - IAI46_13420 0.17 -0.6 2,868,120 + IAI46_13420 0.28 -0.1 2,868,181 + IAI46_13420 0.34 -1.9 2,868,181 + IAI46_13420 0.34 -1.1
Or see this region's nucleotide sequence