Experiment: Manganese (II) chloride tetrahydrate 50 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_12780 and IAI46_12785 are separated by 91 nucleotides IAI46_12785 and IAI46_12790 are separated by 89 nucleotides IAI46_12790 and IAI46_12795 are separated by 136 nucleotides
IAI46_12780: IAI46_12780 - 2-hydroxyacid dehydrogenase, at 2,723,076 to 2,724,026
_12780
IAI46_12785: IAI46_12785 - MFS transporter, at 2,724,118 to 2,725,425
_12785
IAI46_12790: IAI46_12790 - MurR/RpiR family transcriptional regulator, at 2,725,515 to 2,726,249
_12790
IAI46_12795: IAI46_12795 - 6-phospho-beta-glucosidase, at 2,726,386 to 2,727,822
_12795
Position (kb)
2724
2725
2726 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2723.173 kb on - strand, within IAI46_12780 at 2723.278 kb on + strand, within IAI46_12780 at 2723.278 kb on + strand, within IAI46_12780 at 2723.337 kb on + strand, within IAI46_12780 at 2723.337 kb on + strand, within IAI46_12780 at 2723.586 kb on - strand, within IAI46_12780 at 2723.659 kb on + strand, within IAI46_12780 at 2723.659 kb on + strand, within IAI46_12780 at 2723.681 kb on + strand, within IAI46_12780 at 2723.769 kb on - strand, within IAI46_12780 at 2724.104 kb on - strand at 2724.126 kb on + strand at 2724.127 kb on - strand at 2724.132 kb on - strand at 2724.438 kb on - strand, within IAI46_12785 at 2724.469 kb on - strand, within IAI46_12785 at 2724.657 kb on - strand, within IAI46_12785 at 2724.922 kb on - strand, within IAI46_12785 at 2724.983 kb on - strand, within IAI46_12785 at 2725.105 kb on + strand, within IAI46_12785 at 2725.255 kb on + strand, within IAI46_12785 at 2725.276 kb on + strand, within IAI46_12785 at 2725.277 kb on - strand, within IAI46_12785 at 2725.301 kb on + strand at 2725.427 kb on + strand at 2725.514 kb on + strand at 2725.515 kb on - strand at 2725.515 kb on - strand at 2725.515 kb on - strand at 2725.572 kb on + strand at 2725.602 kb on + strand, within IAI46_12790 at 2725.602 kb on + strand, within IAI46_12790 at 2725.602 kb on + strand, within IAI46_12790 at 2725.602 kb on + strand, within IAI46_12790 at 2725.603 kb on - strand, within IAI46_12790 at 2725.940 kb on + strand, within IAI46_12790 at 2725.977 kb on + strand, within IAI46_12790 at 2725.977 kb on + strand, within IAI46_12790 at 2725.977 kb on + strand, within IAI46_12790 at 2725.980 kb on - strand, within IAI46_12790 at 2726.172 kb on - strand, within IAI46_12790 at 2726.297 kb on + strand at 2726.329 kb on - strand at 2726.330 kb on + strand at 2726.366 kb on - strand at 2726.383 kb on - strand at 2726.403 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 50 uM, aerobic remove 2,723,173 - IAI46_12780 0.10 -0.3 2,723,278 + IAI46_12780 0.21 -1.6 2,723,278 + IAI46_12780 0.21 -0.9 2,723,337 + IAI46_12780 0.27 +1.5 2,723,337 + IAI46_12780 0.27 +0.8 2,723,586 - IAI46_12780 0.54 -0.7 2,723,659 + IAI46_12780 0.61 +1.2 2,723,659 + IAI46_12780 0.61 +1.4 2,723,681 + IAI46_12780 0.64 -0.2 2,723,769 - IAI46_12780 0.73 +1.4 2,724,104 - +0.2 2,724,126 + +0.5 2,724,127 - -0.1 2,724,132 - +0.8 2,724,438 - IAI46_12785 0.24 +0.8 2,724,469 - IAI46_12785 0.27 -1.1 2,724,657 - IAI46_12785 0.41 +0.6 2,724,922 - IAI46_12785 0.61 +0.3 2,724,983 - IAI46_12785 0.66 -1.6 2,725,105 + IAI46_12785 0.75 -0.1 2,725,255 + IAI46_12785 0.87 -0.5 2,725,276 + IAI46_12785 0.89 -0.5 2,725,277 - IAI46_12785 0.89 -1.2 2,725,301 + -0.1 2,725,427 + +0.4 2,725,514 + -0.2 2,725,515 - +0.3 2,725,515 - -0.3 2,725,515 - +1.0 2,725,572 + +0.5 2,725,602 + IAI46_12790 0.12 +0.1 2,725,602 + IAI46_12790 0.12 +0.7 2,725,602 + IAI46_12790 0.12 +2.2 2,725,602 + IAI46_12790 0.12 +1.2 2,725,603 - IAI46_12790 0.12 -0.5 2,725,940 + IAI46_12790 0.58 +0.2 2,725,977 + IAI46_12790 0.63 +0.0 2,725,977 + IAI46_12790 0.63 +1.2 2,725,977 + IAI46_12790 0.63 +0.6 2,725,980 - IAI46_12790 0.63 +1.1 2,726,172 - IAI46_12790 0.89 +0.5 2,726,297 + -1.9 2,726,329 - +0.9 2,726,330 + +0.5 2,726,366 - +1.4 2,726,383 - -0.1 2,726,403 - +0.2
Or see this region's nucleotide sequence