Experiment: Manganese (II) chloride tetrahydrate 50 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_12390 and IAI46_12395 are separated by 201 nucleotides IAI46_12395 and IAI46_12400 are separated by 306 nucleotides
IAI46_12390: IAI46_12390 - heavy metal response regulator transcription factor, at 2,631,084 to 2,631,761
_12390
IAI46_12395: IAI46_12395 - alpha/beta hydrolase, at 2,631,963 to 2,633,015
_12395
IAI46_12400: IAI46_12400 - aspartate aminotransferase family protein, at 2,633,322 to 2,634,794
_12400
Position (kb)
2631
2632
2633
2634 Strain fitness (log2 ratio)
-1
0
1
2 at 2631.104 kb on + strand at 2631.105 kb on - strand at 2631.305 kb on + strand, within IAI46_12390 at 2631.323 kb on + strand, within IAI46_12390 at 2631.359 kb on + strand, within IAI46_12390 at 2631.386 kb on + strand, within IAI46_12390 at 2631.390 kb on - strand, within IAI46_12390 at 2631.420 kb on + strand, within IAI46_12390 at 2631.472 kb on + strand, within IAI46_12390 at 2631.540 kb on + strand, within IAI46_12390 at 2631.634 kb on + strand, within IAI46_12390 at 2631.646 kb on + strand, within IAI46_12390 at 2631.750 kb on + strand at 2631.831 kb on + strand at 2631.895 kb on + strand at 2632.218 kb on - strand, within IAI46_12395 at 2632.391 kb on + strand, within IAI46_12395 at 2632.507 kb on + strand, within IAI46_12395 at 2632.636 kb on - strand, within IAI46_12395 at 2632.754 kb on + strand, within IAI46_12395 at 2632.755 kb on - strand, within IAI46_12395 at 2632.755 kb on - strand, within IAI46_12395 at 2632.861 kb on - strand, within IAI46_12395 at 2632.948 kb on - strand at 2632.962 kb on + strand at 2632.978 kb on + strand at 2632.983 kb on - strand at 2633.010 kb on - strand at 2633.091 kb on + strand at 2633.142 kb on + strand at 2633.143 kb on - strand at 2633.197 kb on + strand at 2633.277 kb on + strand at 2633.278 kb on - strand at 2633.278 kb on - strand at 2633.614 kb on + strand, within IAI46_12400 at 2633.792 kb on - strand, within IAI46_12400 at 2633.819 kb on - strand, within IAI46_12400 at 2633.924 kb on - strand, within IAI46_12400 at 2633.932 kb on + strand, within IAI46_12400 at 2633.933 kb on - strand, within IAI46_12400
Per-strain Table
Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 50 uM, aerobic remove 2,631,104 + -0.2 2,631,105 - -0.8 2,631,305 + IAI46_12390 0.33 +0.9 2,631,323 + IAI46_12390 0.35 -0.2 2,631,359 + IAI46_12390 0.41 +0.9 2,631,386 + IAI46_12390 0.45 -0.1 2,631,390 - IAI46_12390 0.45 +0.8 2,631,420 + IAI46_12390 0.50 +0.9 2,631,472 + IAI46_12390 0.57 +0.4 2,631,540 + IAI46_12390 0.67 -0.1 2,631,634 + IAI46_12390 0.81 +0.4 2,631,646 + IAI46_12390 0.83 -0.8 2,631,750 + -0.4 2,631,831 + +0.7 2,631,895 + +0.2 2,632,218 - IAI46_12395 0.24 -0.8 2,632,391 + IAI46_12395 0.41 +0.8 2,632,507 + IAI46_12395 0.52 +1.8 2,632,636 - IAI46_12395 0.64 -0.2 2,632,754 + IAI46_12395 0.75 +1.0 2,632,755 - IAI46_12395 0.75 +0.8 2,632,755 - IAI46_12395 0.75 -0.4 2,632,861 - IAI46_12395 0.85 +1.2 2,632,948 - -0.7 2,632,962 + -1.1 2,632,978 + +0.4 2,632,983 - +1.4 2,633,010 - +0.7 2,633,091 + +0.8 2,633,142 + -0.4 2,633,143 - -0.5 2,633,197 + +0.2 2,633,277 + -0.1 2,633,278 - +0.5 2,633,278 - +0.2 2,633,614 + IAI46_12400 0.20 +1.1 2,633,792 - IAI46_12400 0.32 +0.1 2,633,819 - IAI46_12400 0.34 +1.4 2,633,924 - IAI46_12400 0.41 -0.4 2,633,932 + IAI46_12400 0.41 +1.2 2,633,933 - IAI46_12400 0.41 -1.7
Or see this region's nucleotide sequence