Experiment: Manganese (II) chloride tetrahydrate 50 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_12065 and IAI46_12070 are separated by 283 nucleotides IAI46_12070 and IAI46_12075 are separated by 502 nucleotides IAI46_12075 and IAI46_12080 are separated by 44 nucleotides IAI46_12080 and IAI46_12085 overlap by 4 nucleotides
IAI46_12065: IAI46_12065 - peptidoglycan synthase, at 2,553,217 to 2,554,935
_12065
IAI46_12070: IAI46_12070 - osmotically-inducible lipoprotein OsmB, at 2,555,219 to 2,555,431
_12070
IAI46_12075: IAI46_12075 - multidrug efflux pump-associated protein, AcrZ family, at 2,555,934 to 2,556,068
_12075
IAI46_12080: IAI46_12080 - amino acid ABC transporter ATP-binding protein, at 2,556,113 to 2,556,874
_12080
IAI46_12085: IAI46_12085 - amino acid ABC transporter permease, at 2,556,871 to 2,557,788
_12085
Position (kb)
2555
2556
2557 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2555.112 kb on - strand at 2555.359 kb on + strand, within IAI46_12070 at 2555.399 kb on - strand, within IAI46_12070 at 2555.422 kb on + strand at 2555.573 kb on - strand at 2555.807 kb on + strand at 2555.807 kb on + strand at 2555.948 kb on - strand, within IAI46_12075 at 2556.115 kb on - strand at 2556.152 kb on + strand at 2556.212 kb on - strand, within IAI46_12080 at 2556.363 kb on - strand, within IAI46_12080 at 2556.596 kb on - strand, within IAI46_12080 at 2556.642 kb on + strand, within IAI46_12080 at 2556.949 kb on - strand at 2556.963 kb on - strand, within IAI46_12085 at 2556.963 kb on - strand, within IAI46_12085 at 2556.974 kb on + strand, within IAI46_12085 at 2556.974 kb on + strand, within IAI46_12085 at 2556.975 kb on - strand, within IAI46_12085 at 2556.975 kb on - strand, within IAI46_12085 at 2556.978 kb on - strand, within IAI46_12085 at 2557.052 kb on + strand, within IAI46_12085 at 2557.053 kb on - strand, within IAI46_12085 at 2557.053 kb on - strand, within IAI46_12085 at 2557.053 kb on - strand, within IAI46_12085 at 2557.064 kb on + strand, within IAI46_12085 at 2557.064 kb on + strand, within IAI46_12085
Per-strain Table
Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 50 uM, aerobic remove 2,555,112 - +1.8 2,555,359 + IAI46_12070 0.66 +1.0 2,555,399 - IAI46_12070 0.85 +0.4 2,555,422 + -0.1 2,555,573 - +1.9 2,555,807 + -0.1 2,555,807 + -0.1 2,555,948 - IAI46_12075 0.10 -1.2 2,556,115 - -1.1 2,556,152 + +0.6 2,556,212 - IAI46_12080 0.13 +0.5 2,556,363 - IAI46_12080 0.33 -0.0 2,556,596 - IAI46_12080 0.63 +0.4 2,556,642 + IAI46_12080 0.69 -1.3 2,556,949 - -0.8 2,556,963 - IAI46_12085 0.10 -0.4 2,556,963 - IAI46_12085 0.10 +0.4 2,556,974 + IAI46_12085 0.11 -0.7 2,556,974 + IAI46_12085 0.11 +0.2 2,556,975 - IAI46_12085 0.11 -0.5 2,556,975 - IAI46_12085 0.11 -0.1 2,556,978 - IAI46_12085 0.12 -1.2 2,557,052 + IAI46_12085 0.20 -0.5 2,557,053 - IAI46_12085 0.20 -0.2 2,557,053 - IAI46_12085 0.20 -1.9 2,557,053 - IAI46_12085 0.20 +0.2 2,557,064 + IAI46_12085 0.21 -1.4 2,557,064 + IAI46_12085 0.21 +1.4
Or see this region's nucleotide sequence