Experiment: Manganese (II) chloride tetrahydrate 50 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_11675 and IAI46_11680 are separated by 129 nucleotides IAI46_11680 and IAI46_11685 are separated by 159 nucleotides
IAI46_11675: IAI46_11675 - MFS transporter, at 2,463,664 to 2,464,929
_11675
IAI46_11680: IAI46_11680 - LysR family transcriptional regulator, at 2,465,059 to 2,465,949
_11680
IAI46_11685: IAI46_11685 - ROK family transcriptional regulator, at 2,466,109 to 2,467,326
_11685
Position (kb)
2465
2466 Strain fitness (log2 ratio)
-2
-1
0
1 at 2464.061 kb on + strand, within IAI46_11675 at 2464.061 kb on + strand, within IAI46_11675 at 2464.062 kb on - strand, within IAI46_11675 at 2464.076 kb on + strand, within IAI46_11675 at 2464.149 kb on - strand, within IAI46_11675 at 2464.252 kb on - strand, within IAI46_11675 at 2464.300 kb on - strand, within IAI46_11675 at 2464.433 kb on + strand, within IAI46_11675 at 2464.433 kb on + strand, within IAI46_11675 at 2464.434 kb on - strand, within IAI46_11675 at 2464.484 kb on + strand, within IAI46_11675 at 2464.541 kb on - strand, within IAI46_11675 at 2464.567 kb on - strand, within IAI46_11675 at 2464.770 kb on - strand, within IAI46_11675 at 2465.373 kb on + strand, within IAI46_11680 at 2465.725 kb on + strand, within IAI46_11680 at 2465.725 kb on + strand, within IAI46_11680 at 2465.726 kb on - strand, within IAI46_11680 at 2465.726 kb on - strand, within IAI46_11680 at 2465.795 kb on + strand, within IAI46_11680 at 2466.435 kb on - strand, within IAI46_11685 at 2466.435 kb on - strand, within IAI46_11685 at 2466.616 kb on + strand, within IAI46_11685 at 2466.630 kb on + strand, within IAI46_11685 at 2466.630 kb on + strand, within IAI46_11685 at 2466.630 kb on + strand, within IAI46_11685 at 2466.719 kb on + strand, within IAI46_11685
Per-strain Table
Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 50 uM, aerobic remove 2,464,061 + IAI46_11675 0.31 +0.2 2,464,061 + IAI46_11675 0.31 +0.6 2,464,062 - IAI46_11675 0.31 -0.6 2,464,076 + IAI46_11675 0.33 -0.2 2,464,149 - IAI46_11675 0.38 -0.4 2,464,252 - IAI46_11675 0.46 +1.1 2,464,300 - IAI46_11675 0.50 +0.9 2,464,433 + IAI46_11675 0.61 +0.6 2,464,433 + IAI46_11675 0.61 -0.7 2,464,434 - IAI46_11675 0.61 -0.5 2,464,484 + IAI46_11675 0.65 +0.7 2,464,541 - IAI46_11675 0.69 -0.2 2,464,567 - IAI46_11675 0.71 -0.7 2,464,770 - IAI46_11675 0.87 +0.9 2,465,373 + IAI46_11680 0.35 -0.6 2,465,725 + IAI46_11680 0.75 -0.3 2,465,725 + IAI46_11680 0.75 +0.9 2,465,726 - IAI46_11680 0.75 -0.9 2,465,726 - IAI46_11680 0.75 +0.4 2,465,795 + IAI46_11680 0.83 -0.2 2,466,435 - IAI46_11685 0.27 -1.8 2,466,435 - IAI46_11685 0.27 +1.0 2,466,616 + IAI46_11685 0.42 -0.8 2,466,630 + IAI46_11685 0.43 +0.9 2,466,630 + IAI46_11685 0.43 -0.2 2,466,630 + IAI46_11685 0.43 -0.1 2,466,719 + IAI46_11685 0.50 +1.2
Or see this region's nucleotide sequence