Experiment: Manganese (II) chloride tetrahydrate 50 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_11425 and IAI46_11430 overlap by 36 nucleotides IAI46_11430 and IAI46_11435 are separated by 138 nucleotides IAI46_11435 and IAI46_11440 are separated by 112 nucleotides IAI46_11440 and IAI46_11445 are separated by 158 nucleotides
IAI46_11425: IAI46_11425 - phosphotransferase, at 2,410,008 to 2,410,862
_11425
IAI46_11430: IAI46_11430 - cupin domain-containing protein, at 2,410,827 to 2,411,330
_11430
IAI46_11435: IAI46_11435 - benzoate/H(+) symporter BenE family transporter, at 2,411,469 to 2,412,662
_11435
IAI46_11440: IAI46_11440 - helix-turn-helix transcriptional regulator, at 2,412,775 to 2,413,338
_11440
IAI46_11445: IAI46_11445 - S9 family peptidase, at 2,413,497 to 2,415,587
_11445
Position (kb)
2411
2412
2413 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2410.496 kb on + strand, within IAI46_11425 at 2410.498 kb on + strand, within IAI46_11425 at 2410.498 kb on + strand, within IAI46_11425 at 2410.498 kb on + strand, within IAI46_11425 at 2410.498 kb on + strand, within IAI46_11425 at 2410.498 kb on + strand, within IAI46_11425 at 2410.499 kb on - strand, within IAI46_11425 at 2410.499 kb on - strand, within IAI46_11425 at 2410.499 kb on - strand, within IAI46_11425 at 2410.499 kb on - strand, within IAI46_11425 at 2410.499 kb on - strand, within IAI46_11425 at 2410.499 kb on - strand, within IAI46_11425 at 2410.554 kb on - strand, within IAI46_11425 at 2410.612 kb on - strand, within IAI46_11425 at 2410.876 kb on + strand at 2410.882 kb on - strand, within IAI46_11430 at 2410.978 kb on + strand, within IAI46_11430 at 2411.135 kb on - strand, within IAI46_11430 at 2411.242 kb on + strand, within IAI46_11430 at 2411.331 kb on - strand at 2411.331 kb on - strand at 2411.355 kb on + strand at 2411.404 kb on + strand at 2411.419 kb on + strand at 2411.445 kb on + strand at 2411.513 kb on + strand at 2411.787 kb on - strand, within IAI46_11435 at 2411.788 kb on + strand, within IAI46_11435 at 2411.788 kb on + strand, within IAI46_11435 at 2411.788 kb on + strand, within IAI46_11435 at 2411.852 kb on + strand, within IAI46_11435 at 2411.910 kb on - strand, within IAI46_11435 at 2411.910 kb on - strand, within IAI46_11435 at 2412.033 kb on - strand, within IAI46_11435 at 2412.033 kb on - strand, within IAI46_11435 at 2412.172 kb on - strand, within IAI46_11435 at 2412.179 kb on - strand, within IAI46_11435 at 2412.179 kb on - strand, within IAI46_11435 at 2412.219 kb on + strand, within IAI46_11435 at 2412.295 kb on + strand, within IAI46_11435 at 2412.296 kb on - strand, within IAI46_11435 at 2412.567 kb on - strand at 2412.714 kb on + strand at 2412.714 kb on + strand at 2412.727 kb on + strand at 2412.728 kb on - strand at 2413.016 kb on - strand, within IAI46_11440 at 2413.042 kb on + strand, within IAI46_11440 at 2413.276 kb on + strand, within IAI46_11440 at 2413.302 kb on - strand at 2413.409 kb on - strand at 2413.460 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 50 uM, aerobic remove 2,410,496 + IAI46_11425 0.57 -0.5 2,410,498 + IAI46_11425 0.57 +0.5 2,410,498 + IAI46_11425 0.57 +0.5 2,410,498 + IAI46_11425 0.57 -0.0 2,410,498 + IAI46_11425 0.57 +1.5 2,410,498 + IAI46_11425 0.57 -0.5 2,410,499 - IAI46_11425 0.57 -1.3 2,410,499 - IAI46_11425 0.57 +0.5 2,410,499 - IAI46_11425 0.57 -0.6 2,410,499 - IAI46_11425 0.57 +0.3 2,410,499 - IAI46_11425 0.57 +0.8 2,410,499 - IAI46_11425 0.57 +1.9 2,410,554 - IAI46_11425 0.64 +1.1 2,410,612 - IAI46_11425 0.71 +0.7 2,410,876 + -0.7 2,410,882 - IAI46_11430 0.11 +0.6 2,410,978 + IAI46_11430 0.30 -0.7 2,411,135 - IAI46_11430 0.61 +0.2 2,411,242 + IAI46_11430 0.82 -0.0 2,411,331 - +0.8 2,411,331 - +0.5 2,411,355 + +1.2 2,411,404 + -0.5 2,411,419 + +0.1 2,411,445 + -0.1 2,411,513 + -2.6 2,411,787 - IAI46_11435 0.27 -0.6 2,411,788 + IAI46_11435 0.27 -0.3 2,411,788 + IAI46_11435 0.27 +0.2 2,411,788 + IAI46_11435 0.27 -0.4 2,411,852 + IAI46_11435 0.32 +0.1 2,411,910 - IAI46_11435 0.37 +1.3 2,411,910 - IAI46_11435 0.37 +1.5 2,412,033 - IAI46_11435 0.47 -0.0 2,412,033 - IAI46_11435 0.47 +0.8 2,412,172 - IAI46_11435 0.59 +0.2 2,412,179 - IAI46_11435 0.59 -0.2 2,412,179 - IAI46_11435 0.59 -1.8 2,412,219 + IAI46_11435 0.63 -0.3 2,412,295 + IAI46_11435 0.69 +0.3 2,412,296 - IAI46_11435 0.69 +1.0 2,412,567 - +0.1 2,412,714 + -0.9 2,412,714 + +0.4 2,412,727 + +0.9 2,412,728 - -0.3 2,413,016 - IAI46_11440 0.43 +0.2 2,413,042 + IAI46_11440 0.47 -1.2 2,413,276 + IAI46_11440 0.89 -0.2 2,413,302 - +0.4 2,413,409 - -0.2 2,413,460 + +0.2
Or see this region's nucleotide sequence