Experiment: Manganese (II) chloride tetrahydrate 50 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_10140 and IAI46_10145 are separated by 117 nucleotides IAI46_10145 and IAI46_10150 are separated by 33 nucleotides IAI46_10150 and IAI46_10155 overlap by 4 nucleotides IAI46_10155 and IAI46_10160 are separated by 480 nucleotides
IAI46_10140: IAI46_10140 - carbon-nitrogen hydrolase family protein, at 2,139,526 to 2,140,347
_10140
IAI46_10145: IAI46_10145 - hypothetical protein, at 2,140,465 to 2,140,983
_10145
IAI46_10150: IAI46_10150 - Rho-binding antiterminator, at 2,141,017 to 2,141,268
_10150
IAI46_10155: IAI46_10155 - DUF2024 family protein, at 2,141,265 to 2,141,531
_10155
IAI46_10160: IAI46_10160 - cytochrome-c peroxidase, at 2,142,012 to 2,143,409
_10160
Position (kb)
2141
2142 Strain fitness (log2 ratio)
-1
0
1 at 2140.026 kb on + strand, within IAI46_10140 at 2140.026 kb on + strand, within IAI46_10140 at 2140.026 kb on + strand, within IAI46_10140 at 2140.255 kb on + strand, within IAI46_10140 at 2140.381 kb on - strand at 2140.412 kb on + strand at 2140.413 kb on - strand at 2140.415 kb on + strand at 2140.416 kb on - strand at 2140.474 kb on - strand at 2140.678 kb on - strand, within IAI46_10145 at 2140.786 kb on + strand, within IAI46_10145 at 2140.916 kb on + strand, within IAI46_10145 at 2141.019 kb on - strand at 2141.116 kb on - strand, within IAI46_10150 at 2141.229 kb on - strand, within IAI46_10150 at 2141.258 kb on + strand at 2141.322 kb on - strand, within IAI46_10155 at 2141.322 kb on - strand, within IAI46_10155 at 2141.385 kb on - strand, within IAI46_10155 at 2141.429 kb on - strand, within IAI46_10155 at 2141.482 kb on + strand, within IAI46_10155 at 2141.528 kb on - strand at 2141.532 kb on - strand at 2141.535 kb on + strand at 2141.675 kb on - strand at 2141.698 kb on - strand at 2141.899 kb on - strand at 2141.930 kb on + strand at 2141.937 kb on + strand at 2141.959 kb on - strand at 2141.961 kb on + strand at 2141.964 kb on + strand at 2141.980 kb on - strand at 2141.980 kb on - strand at 2141.994 kb on - strand at 2142.000 kb on + strand at 2142.001 kb on - strand at 2142.061 kb on + strand at 2142.061 kb on + strand at 2142.062 kb on - strand at 2142.067 kb on - strand at 2142.084 kb on + strand at 2142.084 kb on + strand at 2142.110 kb on + strand at 2142.192 kb on + strand, within IAI46_10160 at 2142.193 kb on - strand, within IAI46_10160 at 2142.225 kb on + strand, within IAI46_10160 at 2142.261 kb on + strand, within IAI46_10160 at 2142.261 kb on + strand, within IAI46_10160 at 2142.263 kb on - strand, within IAI46_10160
Per-strain Table
Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 50 uM, aerobic remove 2,140,026 + IAI46_10140 0.61 +0.7 2,140,026 + IAI46_10140 0.61 -0.1 2,140,026 + IAI46_10140 0.61 -0.5 2,140,255 + IAI46_10140 0.89 +1.0 2,140,381 - -0.3 2,140,412 + -0.1 2,140,413 - +0.3 2,140,415 + +0.8 2,140,416 - -0.4 2,140,474 - +0.6 2,140,678 - IAI46_10145 0.41 -0.6 2,140,786 + IAI46_10145 0.62 +0.5 2,140,916 + IAI46_10145 0.87 +0.7 2,141,019 - +0.8 2,141,116 - IAI46_10150 0.39 -0.6 2,141,229 - IAI46_10150 0.84 +0.1 2,141,258 + +0.8 2,141,322 - IAI46_10155 0.21 +0.4 2,141,322 - IAI46_10155 0.21 +0.3 2,141,385 - IAI46_10155 0.45 +0.1 2,141,429 - IAI46_10155 0.61 -0.8 2,141,482 + IAI46_10155 0.81 -0.3 2,141,528 - +0.1 2,141,532 - +0.4 2,141,535 + +0.4 2,141,675 - +0.5 2,141,698 - -0.4 2,141,899 - -0.0 2,141,930 + -0.9 2,141,937 + +0.5 2,141,959 - +0.7 2,141,961 + +0.7 2,141,964 + -0.5 2,141,980 - +1.1 2,141,980 - -0.4 2,141,994 - +0.2 2,142,000 + +0.4 2,142,001 - +0.0 2,142,061 + +0.2 2,142,061 + +0.8 2,142,062 - +1.4 2,142,067 - -0.2 2,142,084 + -1.1 2,142,084 + +0.7 2,142,110 + +0.1 2,142,192 + IAI46_10160 0.13 +0.1 2,142,193 - IAI46_10160 0.13 -0.5 2,142,225 + IAI46_10160 0.15 +0.4 2,142,261 + IAI46_10160 0.18 +0.8 2,142,261 + IAI46_10160 0.18 +0.9 2,142,263 - IAI46_10160 0.18 +1.3
Or see this region's nucleotide sequence