Experiment: Manganese (II) chloride tetrahydrate 50 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_09160 and IAI46_09165 overlap by 1 nucleotides IAI46_09165 and IAI46_09170 overlap by 4 nucleotides IAI46_09170 and IAI46_09175 overlap by 8 nucleotides
IAI46_09160: IAI46_09160 - 4-hydroxyproline epimerase, at 1,964,086 to 1,965,033
_09160
IAI46_09165: IAI46_09165 - FAD-dependent oxidoreductase, at 1,965,033 to 1,966,157
_09165
IAI46_09170: IAI46_09170 - (2Fe-2S)-binding protein, at 1,966,154 to 1,966,414
_09170
IAI46_09175: IAI46_09175 - NAD(P)/FAD-dependent oxidoreductase, at 1,966,407 to 1,967,669
_09175
Position (kb) 1965
1966
1967 Strain fitness (log2 ratio) -2
-1
0
1
2 at 1964.034 kb on - strand at 1964.134 kb on - strand at 1964.193 kb on + strand, within IAI46_09160 at 1964.227 kb on + strand, within IAI46_09160 at 1964.227 kb on + strand, within IAI46_09160 at 1964.228 kb on - strand, within IAI46_09160 at 1964.404 kb on + strand, within IAI46_09160 at 1964.404 kb on + strand, within IAI46_09160 at 1964.471 kb on + strand, within IAI46_09160 at 1964.471 kb on + strand, within IAI46_09160 at 1964.472 kb on - strand, within IAI46_09160 at 1964.794 kb on + strand, within IAI46_09160 at 1964.917 kb on + strand, within IAI46_09160 at 1964.920 kb on + strand, within IAI46_09160 at 1964.920 kb on + strand, within IAI46_09160 at 1964.921 kb on - strand, within IAI46_09160 at 1964.968 kb on + strand at 1964.968 kb on + strand at 1964.969 kb on - strand at 1964.969 kb on - strand at 1964.969 kb on - strand at 1965.189 kb on - strand, within IAI46_09165 at 1965.225 kb on + strand, within IAI46_09165 at 1965.353 kb on + strand, within IAI46_09165 at 1965.354 kb on - strand, within IAI46_09165 at 1965.354 kb on - strand, within IAI46_09165 at 1965.416 kb on + strand, within IAI46_09165 at 1965.421 kb on + strand, within IAI46_09165 at 1965.422 kb on - strand, within IAI46_09165 at 1965.471 kb on + strand, within IAI46_09165 at 1965.472 kb on - strand, within IAI46_09165 at 1966.148 kb on - strand at 1966.154 kb on - strand at 1966.514 kb on + strand at 1966.705 kb on - strand, within IAI46_09175 at 1966.705 kb on - strand, within IAI46_09175 at 1966.745 kb on - strand, within IAI46_09175
Per-strain Table
Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 50 uM, aerobic remove 1,964,034 - -0.5 1,964,134 - +0.1 1,964,193 + IAI46_09160 0.11 +1.3 1,964,227 + IAI46_09160 0.15 -0.0 1,964,227 + IAI46_09160 0.15 +0.1 1,964,228 - IAI46_09160 0.15 -0.2 1,964,404 + IAI46_09160 0.34 -0.0 1,964,404 + IAI46_09160 0.34 +0.7 1,964,471 + IAI46_09160 0.41 -0.1 1,964,471 + IAI46_09160 0.41 -1.0 1,964,472 - IAI46_09160 0.41 -0.0 1,964,794 + IAI46_09160 0.75 +0.4 1,964,917 + IAI46_09160 0.88 +0.5 1,964,920 + IAI46_09160 0.88 +0.2 1,964,920 + IAI46_09160 0.88 +0.2 1,964,921 - IAI46_09160 0.88 +0.2 1,964,968 + -0.2 1,964,968 + +0.5 1,964,969 - -0.2 1,964,969 - -1.3 1,964,969 - -0.2 1,965,189 - IAI46_09165 0.14 +0.2 1,965,225 + IAI46_09165 0.17 -0.5 1,965,353 + IAI46_09165 0.28 +0.1 1,965,354 - IAI46_09165 0.29 +0.3 1,965,354 - IAI46_09165 0.29 +0.5 1,965,416 + IAI46_09165 0.34 +0.3 1,965,421 + IAI46_09165 0.34 +1.3 1,965,422 - IAI46_09165 0.35 -1.9 1,965,471 + IAI46_09165 0.39 +1.3 1,965,472 - IAI46_09165 0.39 +1.0 1,966,148 - -1.0 1,966,154 - +0.2 1,966,514 + -0.0 1,966,705 - IAI46_09175 0.24 +0.1 1,966,705 - IAI46_09175 0.24 +2.4 1,966,745 - IAI46_09175 0.27 -2.2
Or see this region's nucleotide sequence