Experiment: Manganese (II) chloride tetrahydrate 50 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_07360 and IAI46_07365 are separated by 29 nucleotides IAI46_07365 and IAI46_07370 are separated by 73 nucleotides
IAI46_07360: IAI46_07360 - fatty acid desaturase, at 1,557,793 to 1,558,860
_07360
IAI46_07365: IAI46_07365 - ABC transporter substrate-binding protein, at 1,558,890 to 1,559,822
_07365
IAI46_07370: IAI46_07370 - ABC transporter permease, at 1,559,896 to 1,561,056
_07370
Position (kb)
1558
1559
1560 Strain fitness (log2 ratio)
-2
-1
0
1 at 1558.004 kb on - strand, within IAI46_07360 at 1558.005 kb on + strand, within IAI46_07360 at 1558.005 kb on + strand, within IAI46_07360 at 1558.005 kb on + strand, within IAI46_07360 at 1558.005 kb on + strand, within IAI46_07360 at 1558.006 kb on - strand, within IAI46_07360 at 1558.006 kb on - strand, within IAI46_07360 at 1558.006 kb on - strand, within IAI46_07360 at 1558.006 kb on - strand, within IAI46_07360 at 1558.006 kb on - strand, within IAI46_07360 at 1558.006 kb on - strand, within IAI46_07360 at 1558.006 kb on - strand, within IAI46_07360 at 1558.006 kb on - strand, within IAI46_07360 at 1558.006 kb on - strand, within IAI46_07360 at 1558.006 kb on - strand, within IAI46_07360 at 1558.112 kb on - strand, within IAI46_07360 at 1558.125 kb on + strand, within IAI46_07360 at 1558.183 kb on + strand, within IAI46_07360 at 1558.249 kb on - strand, within IAI46_07360 at 1558.255 kb on - strand, within IAI46_07360 at 1558.305 kb on + strand, within IAI46_07360 at 1558.426 kb on + strand, within IAI46_07360 at 1558.426 kb on + strand, within IAI46_07360 at 1558.427 kb on - strand, within IAI46_07360 at 1558.469 kb on + strand, within IAI46_07360 at 1558.518 kb on + strand, within IAI46_07360 at 1558.518 kb on + strand, within IAI46_07360 at 1558.519 kb on - strand, within IAI46_07360 at 1558.519 kb on - strand, within IAI46_07360 at 1558.521 kb on + strand, within IAI46_07360 at 1558.521 kb on + strand, within IAI46_07360 at 1558.522 kb on - strand, within IAI46_07360 at 1558.525 kb on - strand, within IAI46_07360 at 1558.571 kb on - strand, within IAI46_07360 at 1558.577 kb on + strand, within IAI46_07360 at 1558.578 kb on - strand, within IAI46_07360 at 1558.578 kb on - strand, within IAI46_07360 at 1558.578 kb on - strand, within IAI46_07360 at 1558.609 kb on + strand, within IAI46_07360 at 1558.617 kb on - strand, within IAI46_07360 at 1558.648 kb on + strand, within IAI46_07360 at 1558.649 kb on - strand, within IAI46_07360 at 1558.713 kb on + strand, within IAI46_07360 at 1558.858 kb on + strand at 1558.906 kb on + strand at 1558.906 kb on + strand at 1558.907 kb on - strand at 1558.907 kb on - strand at 1558.907 kb on - strand at 1558.907 kb on - strand at 1558.940 kb on - strand at 1559.136 kb on + strand, within IAI46_07365 at 1559.146 kb on - strand, within IAI46_07365 at 1559.146 kb on - strand, within IAI46_07365 at 1559.286 kb on - strand, within IAI46_07365 at 1559.294 kb on + strand, within IAI46_07365 at 1559.294 kb on + strand, within IAI46_07365 at 1559.294 kb on + strand, within IAI46_07365 at 1559.295 kb on - strand, within IAI46_07365 at 1559.295 kb on - strand, within IAI46_07365 at 1559.453 kb on + strand, within IAI46_07365 at 1559.510 kb on + strand, within IAI46_07365 at 1559.557 kb on - strand, within IAI46_07365 at 1559.876 kb on + strand at 1559.902 kb on - strand at 1559.921 kb on + strand at 1559.924 kb on + strand at 1559.925 kb on - strand at 1559.981 kb on - strand at 1560.053 kb on + strand, within IAI46_07370 at 1560.216 kb on + strand, within IAI46_07370 at 1560.322 kb on - strand, within IAI46_07370 at 1560.397 kb on + strand, within IAI46_07370 at 1560.401 kb on - strand, within IAI46_07370 at 1560.401 kb on - strand, within IAI46_07370 at 1560.448 kb on - strand, within IAI46_07370 at 1560.448 kb on - strand, within IAI46_07370 at 1560.448 kb on - strand, within IAI46_07370 at 1560.694 kb on + strand, within IAI46_07370 at 1560.695 kb on - strand, within IAI46_07370 at 1560.695 kb on - strand, within IAI46_07370
Per-strain Table
Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 50 uM, aerobic remove 1,558,004 - IAI46_07360 0.20 -0.2 1,558,005 + IAI46_07360 0.20 +0.3 1,558,005 + IAI46_07360 0.20 +0.2 1,558,005 + IAI46_07360 0.20 -1.4 1,558,005 + IAI46_07360 0.20 +0.1 1,558,006 - IAI46_07360 0.20 -0.5 1,558,006 - IAI46_07360 0.20 +0.7 1,558,006 - IAI46_07360 0.20 -0.1 1,558,006 - IAI46_07360 0.20 -1.3 1,558,006 - IAI46_07360 0.20 +0.6 1,558,006 - IAI46_07360 0.20 -0.2 1,558,006 - IAI46_07360 0.20 +0.1 1,558,006 - IAI46_07360 0.20 +0.3 1,558,006 - IAI46_07360 0.20 +0.3 1,558,006 - IAI46_07360 0.20 -0.5 1,558,112 - IAI46_07360 0.30 -0.5 1,558,125 + IAI46_07360 0.31 +0.2 1,558,183 + IAI46_07360 0.37 +1.3 1,558,249 - IAI46_07360 0.43 +1.2 1,558,255 - IAI46_07360 0.43 +0.4 1,558,305 + IAI46_07360 0.48 +1.0 1,558,426 + IAI46_07360 0.59 +1.6 1,558,426 + IAI46_07360 0.59 +0.2 1,558,427 - IAI46_07360 0.59 -0.2 1,558,469 + IAI46_07360 0.63 +0.2 1,558,518 + IAI46_07360 0.68 -0.3 1,558,518 + IAI46_07360 0.68 -0.6 1,558,519 - IAI46_07360 0.68 +0.2 1,558,519 - IAI46_07360 0.68 -0.3 1,558,521 + IAI46_07360 0.68 -0.1 1,558,521 + IAI46_07360 0.68 -0.0 1,558,522 - IAI46_07360 0.68 -0.5 1,558,525 - IAI46_07360 0.69 +0.0 1,558,571 - IAI46_07360 0.73 +0.2 1,558,577 + IAI46_07360 0.73 +0.4 1,558,578 - IAI46_07360 0.74 +0.1 1,558,578 - IAI46_07360 0.74 -0.3 1,558,578 - IAI46_07360 0.74 +0.3 1,558,609 + IAI46_07360 0.76 +1.0 1,558,617 - IAI46_07360 0.77 +0.6 1,558,648 + IAI46_07360 0.80 +0.6 1,558,649 - IAI46_07360 0.80 +0.5 1,558,713 + IAI46_07360 0.86 +0.8 1,558,858 + +0.1 1,558,906 + +0.5 1,558,906 + +0.9 1,558,907 - -0.5 1,558,907 - -0.2 1,558,907 - -0.3 1,558,907 - -0.6 1,558,940 - +0.5 1,559,136 + IAI46_07365 0.26 +0.3 1,559,146 - IAI46_07365 0.27 +0.0 1,559,146 - IAI46_07365 0.27 -0.8 1,559,286 - IAI46_07365 0.42 -0.1 1,559,294 + IAI46_07365 0.43 +0.2 1,559,294 + IAI46_07365 0.43 +0.5 1,559,294 + IAI46_07365 0.43 +0.0 1,559,295 - IAI46_07365 0.43 +1.1 1,559,295 - IAI46_07365 0.43 -0.3 1,559,453 + IAI46_07365 0.60 -0.6 1,559,510 + IAI46_07365 0.66 +0.1 1,559,557 - IAI46_07365 0.71 -0.1 1,559,876 + +0.9 1,559,902 - -0.1 1,559,921 + -0.3 1,559,924 + +0.6 1,559,925 - +0.5 1,559,981 - -0.7 1,560,053 + IAI46_07370 0.14 +0.1 1,560,216 + IAI46_07370 0.28 -2.1 1,560,322 - IAI46_07370 0.37 +1.3 1,560,397 + IAI46_07370 0.43 +0.3 1,560,401 - IAI46_07370 0.43 -0.3 1,560,401 - IAI46_07370 0.43 -0.2 1,560,448 - IAI46_07370 0.48 +0.6 1,560,448 - IAI46_07370 0.48 -0.3 1,560,448 - IAI46_07370 0.48 +0.0 1,560,694 + IAI46_07370 0.69 -0.1 1,560,695 - IAI46_07370 0.69 +0.4 1,560,695 - IAI46_07370 0.69 -0.2
Or see this region's nucleotide sequence