Experiment: Manganese (II) chloride tetrahydrate 50 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_04275 and IAI46_04280 overlap by 20 nucleotides IAI46_04280 and IAI46_04285 overlap by 8 nucleotides IAI46_04285 and IAI46_04290 are separated by 37 nucleotides IAI46_04290 and IAI46_04295 are separated by 39 nucleotides IAI46_04295 and IAI46_04300 overlap by 13 nucleotides
IAI46_04275: IAI46_04275 - allantoate amidohydrolase, at 918,360 to 919,634
_04275
IAI46_04280: IAI46_04280 - 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, at 919,615 to 920,115
_04280
IAI46_04285: IAI46_04285 - hydroxyisourate hydrolase, at 920,108 to 920,443
_04285
IAI46_04290: IAI46_04290 - purine permease, at 920,481 to 921,833
_04290
IAI46_04295: IAI46_04295 - amidohydrolase, at 921,873 to 922,646
_04295
IAI46_04300: IAI46_04300 - pyridoxal phosphate-dependent aminotransferase, at 922,634 to 923,794
_04300
Position (kb) 920
921
922 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 919.547 kb on - strand at 919.581 kb on + strand at 919.632 kb on + strand at 919.632 kb on + strand at 919.632 kb on + strand at 920.114 kb on - strand at 920.116 kb on + strand at 920.116 kb on + strand at 920.339 kb on + strand, within IAI46_04285 at 920.339 kb on + strand, within IAI46_04285 at 920.339 kb on + strand, within IAI46_04285 at 920.339 kb on + strand, within IAI46_04285 at 920.340 kb on - strand, within IAI46_04285 at 920.420 kb on + strand at 920.441 kb on + strand at 920.442 kb on - strand at 920.476 kb on + strand at 920.476 kb on + strand at 920.476 kb on + strand at 920.476 kb on + strand at 920.477 kb on - strand at 920.477 kb on - strand at 920.477 kb on - strand at 920.477 kb on - strand at 920.480 kb on + strand at 920.480 kb on + strand at 920.480 kb on + strand at 920.480 kb on + strand at 920.480 kb on + strand at 920.480 kb on + strand at 920.480 kb on + strand at 920.480 kb on + strand at 920.481 kb on - strand at 920.481 kb on - strand at 920.481 kb on - strand at 920.481 kb on - strand at 920.574 kb on - strand at 920.574 kb on - strand at 920.574 kb on - strand at 920.586 kb on + strand at 920.586 kb on + strand at 920.586 kb on + strand at 920.586 kb on + strand at 920.586 kb on + strand at 920.586 kb on + strand at 920.586 kb on + strand at 920.587 kb on - strand at 920.587 kb on - strand at 920.587 kb on - strand at 920.587 kb on - strand at 920.587 kb on - strand at 920.587 kb on - strand at 920.587 kb on - strand at 920.600 kb on - strand at 920.600 kb on - strand at 920.600 kb on - strand at 920.617 kb on + strand, within IAI46_04290 at 920.617 kb on + strand, within IAI46_04290 at 920.618 kb on - strand, within IAI46_04290 at 920.618 kb on - strand, within IAI46_04290 at 920.618 kb on - strand, within IAI46_04290 at 920.635 kb on + strand, within IAI46_04290 at 920.636 kb on - strand, within IAI46_04290 at 920.789 kb on - strand, within IAI46_04290 at 920.789 kb on - strand, within IAI46_04290 at 920.789 kb on - strand, within IAI46_04290 at 920.855 kb on - strand, within IAI46_04290 at 920.855 kb on - strand, within IAI46_04290 at 920.861 kb on - strand, within IAI46_04290 at 920.883 kb on - strand, within IAI46_04290 at 921.011 kb on + strand, within IAI46_04290 at 921.011 kb on + strand, within IAI46_04290 at 921.199 kb on - strand, within IAI46_04290 at 921.256 kb on + strand, within IAI46_04290 at 921.260 kb on - strand, within IAI46_04290 at 921.354 kb on - strand, within IAI46_04290 at 921.615 kb on + strand, within IAI46_04290 at 921.617 kb on + strand, within IAI46_04290 at 921.617 kb on + strand, within IAI46_04290 at 921.617 kb on + strand, within IAI46_04290 at 921.617 kb on + strand, within IAI46_04290 at 921.617 kb on + strand, within IAI46_04290 at 921.694 kb on - strand, within IAI46_04290 at 921.719 kb on + strand at 921.719 kb on + strand at 921.720 kb on - strand at 921.720 kb on - strand at 922.039 kb on + strand, within IAI46_04295 at 922.039 kb on + strand, within IAI46_04295 at 922.088 kb on - strand, within IAI46_04295 at 922.165 kb on + strand, within IAI46_04295 at 922.165 kb on + strand, within IAI46_04295 at 922.165 kb on + strand, within IAI46_04295 at 922.165 kb on + strand, within IAI46_04295 at 922.166 kb on - strand, within IAI46_04295 at 922.166 kb on - strand, within IAI46_04295 at 922.180 kb on + strand, within IAI46_04295 at 922.181 kb on - strand, within IAI46_04295 at 922.223 kb on - strand, within IAI46_04295 at 922.223 kb on - strand, within IAI46_04295 at 922.328 kb on + strand, within IAI46_04295 at 922.328 kb on + strand, within IAI46_04295 at 922.333 kb on + strand, within IAI46_04295 at 922.334 kb on - strand, within IAI46_04295 at 922.334 kb on - strand, within IAI46_04295 at 922.514 kb on + strand, within IAI46_04295 at 922.514 kb on + strand, within IAI46_04295 at 922.515 kb on - strand, within IAI46_04295 at 922.531 kb on - strand, within IAI46_04295 at 922.551 kb on + strand, within IAI46_04295 at 922.552 kb on - strand, within IAI46_04295 at 922.552 kb on - strand, within IAI46_04295 at 922.629 kb on - strand at 922.684 kb on + strand at 922.829 kb on + strand, within IAI46_04300 at 922.830 kb on - strand, within IAI46_04300
Per-strain Table
Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 50 uM, aerobic remove 919,547 - -0.1 919,581 + +0.8 919,632 + +0.1 919,632 + +0.2 919,632 + -1.0 920,114 - -0.2 920,116 + -0.7 920,116 + -2.9 920,339 + IAI46_04285 0.69 +0.1 920,339 + IAI46_04285 0.69 +0.7 920,339 + IAI46_04285 0.69 -0.2 920,339 + IAI46_04285 0.69 +0.7 920,340 - IAI46_04285 0.69 +0.2 920,420 + +0.4 920,441 + -2.0 920,442 - +0.5 920,476 + -1.7 920,476 + +1.1 920,476 + +0.7 920,476 + +0.1 920,477 - +0.6 920,477 - -0.5 920,477 - +1.9 920,477 - -0.7 920,480 + +0.9 920,480 + -0.2 920,480 + +1.1 920,480 + +0.7 920,480 + -0.4 920,480 + +0.3 920,480 + -0.1 920,480 + +0.3 920,481 - -0.6 920,481 - +0.6 920,481 - -0.0 920,481 - -0.4 920,574 - -0.4 920,574 - +0.9 920,574 - +0.1 920,586 + +0.6 920,586 + +0.1 920,586 + +1.1 920,586 + -0.2 920,586 + -0.2 920,586 + -0.0 920,586 + -0.3 920,587 - -0.2 920,587 - -0.2 920,587 - +0.8 920,587 - +0.7 920,587 - -0.7 920,587 - +0.0 920,587 - -0.5 920,600 - -0.0 920,600 - +0.7 920,600 - +1.3 920,617 + IAI46_04290 0.10 +0.5 920,617 + IAI46_04290 0.10 +0.2 920,618 - IAI46_04290 0.10 -0.0 920,618 - IAI46_04290 0.10 +0.5 920,618 - IAI46_04290 0.10 +1.0 920,635 + IAI46_04290 0.11 -0.8 920,636 - IAI46_04290 0.11 +0.5 920,789 - IAI46_04290 0.23 +2.1 920,789 - IAI46_04290 0.23 +0.3 920,789 - IAI46_04290 0.23 -0.3 920,855 - IAI46_04290 0.28 +1.8 920,855 - IAI46_04290 0.28 -0.4 920,861 - IAI46_04290 0.28 +0.5 920,883 - IAI46_04290 0.30 +0.8 921,011 + IAI46_04290 0.39 -1.4 921,011 + IAI46_04290 0.39 +0.0 921,199 - IAI46_04290 0.53 +0.7 921,256 + IAI46_04290 0.57 -0.2 921,260 - IAI46_04290 0.58 +0.1 921,354 - IAI46_04290 0.65 -0.1 921,615 + IAI46_04290 0.84 -0.1 921,617 + IAI46_04290 0.84 -0.2 921,617 + IAI46_04290 0.84 +0.2 921,617 + IAI46_04290 0.84 +0.8 921,617 + IAI46_04290 0.84 +0.8 921,617 + IAI46_04290 0.84 +0.6 921,694 - IAI46_04290 0.90 -0.5 921,719 + -0.1 921,719 + +0.5 921,720 - -0.1 921,720 - -1.0 922,039 + IAI46_04295 0.21 +0.5 922,039 + IAI46_04295 0.21 -0.8 922,088 - IAI46_04295 0.28 +0.6 922,165 + IAI46_04295 0.38 -1.0 922,165 + IAI46_04295 0.38 -0.5 922,165 + IAI46_04295 0.38 +0.2 922,165 + IAI46_04295 0.38 +0.8 922,166 - IAI46_04295 0.38 -0.3 922,166 - IAI46_04295 0.38 -1.4 922,180 + IAI46_04295 0.40 +0.0 922,181 - IAI46_04295 0.40 -0.4 922,223 - IAI46_04295 0.45 +0.3 922,223 - IAI46_04295 0.45 -0.1 922,328 + IAI46_04295 0.59 -0.1 922,328 + IAI46_04295 0.59 -0.6 922,333 + IAI46_04295 0.59 +1.4 922,334 - IAI46_04295 0.60 -0.3 922,334 - IAI46_04295 0.60 -0.4 922,514 + IAI46_04295 0.83 -1.8 922,514 + IAI46_04295 0.83 +0.4 922,515 - IAI46_04295 0.83 -0.3 922,531 - IAI46_04295 0.85 +0.5 922,551 + IAI46_04295 0.88 +0.3 922,552 - IAI46_04295 0.88 +1.0 922,552 - IAI46_04295 0.88 +1.4 922,629 - -0.0 922,684 + +1.4 922,829 + IAI46_04300 0.17 +0.1 922,830 - IAI46_04300 0.17 +0.1
Or see this region's nucleotide sequence