Experiment: Manganese (II) chloride tetrahydrate 50 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_03745 and IAI46_03750 are separated by 406 nucleotides IAI46_03750 and IAI46_03755 are separated by 3 nucleotides IAI46_03755 and IAI46_03760 are separated by 10 nucleotides IAI46_03760 and IAI46_03765 are separated by 4 nucleotides
IAI46_03745: IAI46_03745 - basic amino acid ABC transporter substrate-binding protein, at 815,698 to 816,468
_03745
IAI46_03750: IAI46_03750 - cell division protein FtsB, at 816,875 to 817,195
_03750
IAI46_03755: IAI46_03755 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, at 817,199 to 817,906
_03755
IAI46_03760: IAI46_03760 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, at 817,917 to 818,390
_03760
IAI46_03765: IAI46_03765 - tRNA pseudouridine(13) synthase TruD, at 818,395 to 819,441
_03765
Position (kb) 817
818 Strain fitness (log2 ratio) -2
-1
0
1
2 at 816.244 kb on - strand, within IAI46_03745 at 816.259 kb on - strand, within IAI46_03745 at 816.310 kb on - strand, within IAI46_03745 at 816.314 kb on - strand, within IAI46_03745 at 816.316 kb on - strand, within IAI46_03745 at 816.354 kb on - strand, within IAI46_03745 at 816.365 kb on + strand, within IAI46_03745 at 816.365 kb on + strand, within IAI46_03745 at 816.366 kb on - strand, within IAI46_03745 at 816.389 kb on + strand, within IAI46_03745 at 816.389 kb on + strand, within IAI46_03745 at 816.389 kb on + strand, within IAI46_03745 at 816.389 kb on + strand, within IAI46_03745 at 816.389 kb on + strand, within IAI46_03745 at 816.390 kb on - strand, within IAI46_03745 at 816.393 kb on + strand at 816.393 kb on + strand at 816.393 kb on + strand at 816.394 kb on - strand at 816.454 kb on + strand at 816.463 kb on - strand at 816.516 kb on + strand at 816.561 kb on + strand at 816.590 kb on - strand at 816.762 kb on + strand at 816.764 kb on + strand at 816.764 kb on + strand at 816.765 kb on - strand at 816.778 kb on + strand at 816.778 kb on + strand at 816.786 kb on + strand at 816.786 kb on + strand at 817.180 kb on + strand at 817.180 kb on + strand at 817.180 kb on + strand at 817.185 kb on + strand at 817.904 kb on + strand at 817.904 kb on + strand at 818.401 kb on - strand at 818.406 kb on + strand at 818.406 kb on + strand at 818.550 kb on + strand, within IAI46_03765 at 818.550 kb on + strand, within IAI46_03765 at 818.551 kb on - strand, within IAI46_03765 at 818.551 kb on - strand, within IAI46_03765 at 818.572 kb on + strand, within IAI46_03765 at 818.572 kb on + strand, within IAI46_03765 at 818.572 kb on + strand, within IAI46_03765 at 818.615 kb on - strand, within IAI46_03765 at 818.624 kb on + strand, within IAI46_03765 at 818.785 kb on - strand, within IAI46_03765 at 818.802 kb on + strand, within IAI46_03765 at 818.803 kb on - strand, within IAI46_03765 at 818.823 kb on - strand, within IAI46_03765 at 818.859 kb on - strand, within IAI46_03765 at 818.867 kb on - strand, within IAI46_03765
Per-strain Table
Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 50 uM, aerobic remove 816,244 - IAI46_03745 0.71 +0.0 816,259 - IAI46_03745 0.73 +0.1 816,310 - IAI46_03745 0.79 +0.6 816,314 - IAI46_03745 0.80 -0.5 816,316 - IAI46_03745 0.80 +0.5 816,354 - IAI46_03745 0.85 +0.9 816,365 + IAI46_03745 0.87 +0.6 816,365 + IAI46_03745 0.87 -1.7 816,366 - IAI46_03745 0.87 -0.0 816,389 + IAI46_03745 0.90 -0.3 816,389 + IAI46_03745 0.90 +0.9 816,389 + IAI46_03745 0.90 +0.5 816,389 + IAI46_03745 0.90 -0.3 816,389 + IAI46_03745 0.90 -0.0 816,390 - IAI46_03745 0.90 -0.4 816,393 + +0.1 816,393 + +0.9 816,393 + +0.0 816,394 - +0.8 816,454 + -0.8 816,463 - +1.1 816,516 + -0.0 816,561 + +0.2 816,590 - -0.0 816,762 + +0.1 816,764 + -0.8 816,764 + +0.5 816,765 - +0.2 816,778 + -0.4 816,778 + -2.1 816,786 + +0.9 816,786 + +0.5 817,180 + +0.3 817,180 + -0.0 817,180 + -0.4 817,185 + +0.1 817,904 + +0.9 817,904 + -0.9 818,401 - -0.3 818,406 + -0.2 818,406 + +0.0 818,550 + IAI46_03765 0.15 -0.0 818,550 + IAI46_03765 0.15 +0.2 818,551 - IAI46_03765 0.15 -0.2 818,551 - IAI46_03765 0.15 -0.6 818,572 + IAI46_03765 0.17 +2.1 818,572 + IAI46_03765 0.17 +0.4 818,572 + IAI46_03765 0.17 +0.2 818,615 - IAI46_03765 0.21 +0.3 818,624 + IAI46_03765 0.22 +1.4 818,785 - IAI46_03765 0.37 -0.0 818,802 + IAI46_03765 0.39 +0.4 818,803 - IAI46_03765 0.39 +0.2 818,823 - IAI46_03765 0.41 -0.2 818,859 - IAI46_03765 0.44 +0.0 818,867 - IAI46_03765 0.45 -0.0
Or see this region's nucleotide sequence