Strain Fitness in Serratia liquefaciens MT49 around IAI46_03405

Experiment: Manganese (II) chloride tetrahydrate 50 uM, aerobic

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntIAI46_03395 and IAI46_03400 are separated by 2 nucleotidesIAI46_03400 and IAI46_03405 overlap by 4 nucleotidesIAI46_03405 and IAI46_03410 are separated by 42 nucleotides IAI46_03395: IAI46_03395 - division/cell wall cluster transcriptional repressor MraZ, at 735,806 to 736,264 _03395 IAI46_03400: IAI46_03400 - 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH, at 736,267 to 737,208 _03400 IAI46_03405: IAI46_03405 - cell division protein FtsL, at 737,205 to 737,525 _03405 IAI46_03410: IAI46_03410 - peptidoglycan glycosyltransferase FtsI, at 737,568 to 739,331 _03410 Position (kb) 737 738Strain fitness (log2 ratio) -1 0 1at 736.490 kb on + strand, within IAI46_03400

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Per-strain Table

Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 50 uM, aerobic
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736,490 + IAI46_03400 0.24 -0.8

Or see this region's nucleotide sequence