Experiment: Manganese (II) chloride tetrahydrate 50 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_00555 and IAI46_00560 are separated by 27 nucleotides IAI46_00560 and IAI46_00565 are separated by 109 nucleotides
IAI46_00555: IAI46_00555 - insulinase family protein, at 130,675 to 132,168
_00555
IAI46_00560: IAI46_00560 - peptidylprolyl isomerase, at 132,196 to 132,477
_00560
IAI46_00565: IAI46_00565 - DNA helicase Rep, at 132,587 to 134,611
_00565
Position (kb) 132
133 Strain fitness (log2 ratio) -2
-1
0
1 at 131.314 kb on + strand, within IAI46_00555 at 131.314 kb on + strand, within IAI46_00555 at 131.314 kb on + strand, within IAI46_00555 at 131.314 kb on + strand, within IAI46_00555 at 131.315 kb on - strand, within IAI46_00555 at 131.315 kb on - strand, within IAI46_00555 at 131.315 kb on - strand, within IAI46_00555 at 131.315 kb on - strand, within IAI46_00555 at 131.316 kb on + strand, within IAI46_00555 at 131.317 kb on - strand, within IAI46_00555 at 131.338 kb on + strand, within IAI46_00555 at 131.338 kb on + strand, within IAI46_00555 at 131.339 kb on - strand, within IAI46_00555 at 131.339 kb on - strand, within IAI46_00555 at 131.339 kb on - strand, within IAI46_00555 at 131.354 kb on + strand, within IAI46_00555 at 131.354 kb on + strand, within IAI46_00555 at 131.496 kb on + strand, within IAI46_00555 at 131.497 kb on - strand, within IAI46_00555 at 131.575 kb on - strand, within IAI46_00555 at 131.575 kb on - strand, within IAI46_00555 at 131.575 kb on - strand, within IAI46_00555 at 131.668 kb on + strand, within IAI46_00555 at 131.669 kb on - strand, within IAI46_00555 at 131.669 kb on - strand, within IAI46_00555 at 131.763 kb on + strand, within IAI46_00555 at 131.842 kb on + strand, within IAI46_00555 at 131.843 kb on - strand, within IAI46_00555 at 131.843 kb on - strand, within IAI46_00555 at 131.843 kb on - strand, within IAI46_00555 at 131.843 kb on - strand, within IAI46_00555 at 131.906 kb on + strand, within IAI46_00555 at 131.907 kb on - strand, within IAI46_00555 at 131.910 kb on + strand, within IAI46_00555 at 131.927 kb on - strand, within IAI46_00555 at 131.927 kb on - strand, within IAI46_00555 at 132.066 kb on - strand at 132.066 kb on - strand at 132.076 kb on + strand at 132.076 kb on + strand at 132.076 kb on + strand at 132.077 kb on - strand at 132.077 kb on - strand at 132.078 kb on + strand at 132.087 kb on + strand at 132.087 kb on + strand at 132.088 kb on - strand at 132.088 kb on - strand at 132.219 kb on + strand at 132.219 kb on + strand at 132.219 kb on + strand at 132.220 kb on - strand at 132.220 kb on - strand at 132.254 kb on + strand, within IAI46_00560 at 132.365 kb on + strand, within IAI46_00560 at 132.439 kb on - strand, within IAI46_00560 at 132.442 kb on + strand, within IAI46_00560 at 132.443 kb on - strand, within IAI46_00560 at 132.480 kb on + strand at 132.481 kb on - strand at 132.495 kb on + strand at 132.513 kb on + strand at 132.513 kb on + strand at 132.513 kb on + strand at 132.513 kb on + strand at 132.513 kb on + strand at 132.514 kb on - strand at 132.514 kb on - strand at 132.514 kb on - strand at 132.514 kb on - strand at 132.515 kb on + strand at 132.515 kb on + strand at 132.545 kb on + strand at 132.545 kb on + strand at 132.545 kb on + strand at 132.546 kb on - strand at 132.546 kb on - strand at 132.565 kb on + strand at 132.565 kb on + strand at 132.578 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 50 uM, aerobic remove 131,314 + IAI46_00555 0.43 +0.6 131,314 + IAI46_00555 0.43 +0.4 131,314 + IAI46_00555 0.43 +0.1 131,314 + IAI46_00555 0.43 +0.8 131,315 - IAI46_00555 0.43 +0.9 131,315 - IAI46_00555 0.43 +1.4 131,315 - IAI46_00555 0.43 +0.3 131,315 - IAI46_00555 0.43 +0.5 131,316 + IAI46_00555 0.43 +0.1 131,317 - IAI46_00555 0.43 +0.1 131,338 + IAI46_00555 0.44 +0.4 131,338 + IAI46_00555 0.44 +1.1 131,339 - IAI46_00555 0.44 +0.1 131,339 - IAI46_00555 0.44 +0.5 131,339 - IAI46_00555 0.44 -0.1 131,354 + IAI46_00555 0.45 +0.3 131,354 + IAI46_00555 0.45 +0.5 131,496 + IAI46_00555 0.55 +1.4 131,497 - IAI46_00555 0.55 +0.1 131,575 - IAI46_00555 0.60 +0.4 131,575 - IAI46_00555 0.60 -0.0 131,575 - IAI46_00555 0.60 +0.0 131,668 + IAI46_00555 0.66 +0.0 131,669 - IAI46_00555 0.67 +0.7 131,669 - IAI46_00555 0.67 -0.2 131,763 + IAI46_00555 0.73 +1.0 131,842 + IAI46_00555 0.78 -0.6 131,843 - IAI46_00555 0.78 +0.4 131,843 - IAI46_00555 0.78 -1.7 131,843 - IAI46_00555 0.78 +0.5 131,843 - IAI46_00555 0.78 +0.3 131,906 + IAI46_00555 0.82 +0.4 131,907 - IAI46_00555 0.82 +0.5 131,910 + IAI46_00555 0.83 +0.2 131,927 - IAI46_00555 0.84 +0.6 131,927 - IAI46_00555 0.84 -0.1 132,066 - -0.8 132,066 - +0.3 132,076 + +0.3 132,076 + +0.5 132,076 + +0.6 132,077 - +0.2 132,077 - -0.4 132,078 + +0.3 132,087 + +0.8 132,087 + +0.3 132,088 - +0.3 132,088 - +0.1 132,219 + +1.1 132,219 + +0.5 132,219 + +0.0 132,220 - +0.2 132,220 - -0.2 132,254 + IAI46_00560 0.21 -0.5 132,365 + IAI46_00560 0.60 -0.1 132,439 - IAI46_00560 0.86 -0.6 132,442 + IAI46_00560 0.87 -0.3 132,443 - IAI46_00560 0.88 -0.5 132,480 + -0.5 132,481 - +0.2 132,495 + -0.7 132,513 + +0.1 132,513 + +0.5 132,513 + -0.1 132,513 + +1.0 132,513 + +0.4 132,514 - -0.2 132,514 - -2.1 132,514 - +0.1 132,514 - +0.9 132,515 + +0.1 132,515 + -0.7 132,545 + -1.4 132,545 + +1.2 132,545 + -0.4 132,546 - +1.1 132,546 - -0.9 132,565 + -0.5 132,565 + -0.2 132,578 + -0.5
Or see this region's nucleotide sequence