Strain Fitness in Serratia liquefaciens MT49 around IAI46_00040

Experiment: Manganese (II) chloride tetrahydrate 50 uM, aerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Manganese (II) chloride tetrahydrate 50 uM, aerobic
8,265	+		IAI46_00035	0.18	-1.3
8,265	+		IAI46_00035	0.18	-0.1
8,266	-		IAI46_00035	0.18	+0.3
8,335	-		IAI46_00035	0.25	-0.5
8,337	+		IAI46_00035	0.26	-0.2
8,337	+		IAI46_00035	0.26	-0.3
8,337	+		IAI46_00035	0.26	+0.1
8,337	+		IAI46_00035	0.26	+0.2
8,338	-		IAI46_00035	0.26	+0.3
8,338	-		IAI46_00035	0.26	+0.2
8,338	-		IAI46_00035	0.26	-1.0
8,338	-		IAI46_00035	0.26	-0.3
8,379	+		IAI46_00035	0.30	+1.5
8,416	+		IAI46_00035	0.34	+0.0
8,416	+		IAI46_00035	0.34	+0.5
8,426	+		IAI46_00035	0.35	+1.6
8,426	+		IAI46_00035	0.35	-1.4
8,426	+		IAI46_00035	0.35	+0.3
8,426	+		IAI46_00035	0.35	+1.1
8,512	-		IAI46_00035	0.44	+1.3
8,512	-		IAI46_00035	0.44	+0.3
8,616	+		IAI46_00035	0.54	-0.0
8,616	+		IAI46_00035	0.54	+0.5
8,617	-		IAI46_00035	0.54	-0.1
8,618	+		IAI46_00035	0.55	-0.8
8,618	+		IAI46_00035	0.55	+0.4
8,619	-		IAI46_00035	0.55	-0.6
8,619	-		IAI46_00035	0.55	-0.4
8,630	+		IAI46_00035	0.56	+0.5
8,630	+		IAI46_00035	0.56	-0.7
8,630	+		IAI46_00035	0.56	+2.1
8,631	-		IAI46_00035	0.56	-0.3
8,680	+		IAI46_00035	0.61	+0.2
8,681	-		IAI46_00035	0.61	-0.1
8,704	+		IAI46_00035	0.63	-0.1
8,705	-		IAI46_00035	0.64	-0.7
8,765	+		IAI46_00035	0.70	+0.7
8,884	-		IAI46_00035	0.82	+0.3
8,887	-		IAI46_00035	0.82	+0.8
8,904	+		IAI46_00035	0.84	+0.6
8,974	+				-0.4
8,974	+				-0.4
8,974	+				-0.3
8,974	+				+1.0
8,974	+				+0.3
8,975	-				+0.5
9,047	-				-0.4
9,047	-				+0.1
9,069	+				+1.2
9,070	-				+1.0
9,119	+				-0.4
9,123	+				+0.3
9,131	+				-0.1
9,132	-				-0.3
9,149	+				+1.9
9,149	+				-0.2
9,150	-				-0.8
9,150	-				+0.1
9,150	-				-0.7
9,189	-				+0.3
9,189	-				-0.2
9,278	+				-0.4
9,285	+				+0.3
9,288	+				+0.2
9,288	+				+0.4
9,289	-				-0.9
9,289	-				-0.6
9,323	-				+0.9
9,329	+				+1.0
9,330	-				-0.2
9,330	-				-0.9
9,330	-				-0.8
9,392	+		IAI46_00040	0.13	-0.3
9,393	-		IAI46_00040	0.13	-0.2
9,469	+		IAI46_00040	0.19	+0.4
9,515	-		IAI46_00040	0.22	+0.3
9,573	+		IAI46_00040	0.27	-1.6
9,604	+		IAI46_00040	0.29	+0.1
9,604	+		IAI46_00040	0.29	+0.1
9,605	-		IAI46_00040	0.29	-0.3
9,605	-		IAI46_00040	0.29	+0.1
9,605	-		IAI46_00040	0.29	-0.3
9,605	-		IAI46_00040	0.29	-1.1
9,606	+		IAI46_00040	0.29	-0.1
9,606	+		IAI46_00040	0.29	-0.6
9,607	-		IAI46_00040	0.30	-0.5
9,607	-		IAI46_00040	0.30	+0.8
9,607	-		IAI46_00040	0.30	-0.3
9,607	-		IAI46_00040	0.30	-1.1
9,638	+		IAI46_00040	0.32	-0.3
9,639	-		IAI46_00040	0.32	-0.6
9,639	-		IAI46_00040	0.32	-2.1
9,675	+		IAI46_00040	0.35	+0.4
9,675	+		IAI46_00040	0.35	-0.5
9,675	+		IAI46_00040	0.35	-0.2
9,676	-		IAI46_00040	0.35	-0.2
9,676	-		IAI46_00040	0.35	+0.6
9,679	+		IAI46_00040	0.35	+0.2
9,679	+		IAI46_00040	0.35	-0.6
9,679	+		IAI46_00040	0.35	+0.0
9,679	+		IAI46_00040	0.35	-0.3
9,679	+		IAI46_00040	0.35	+0.3
9,679	+		IAI46_00040	0.35	-1.7
9,680	-		IAI46_00040	0.35	-0.2
9,680	-		IAI46_00040	0.35	-0.2
9,680	-		IAI46_00040	0.35	-0.9
9,680	-		IAI46_00040	0.35	-0.5
9,681	+		IAI46_00040	0.35	-0.8
9,727	-		IAI46_00040	0.39	+0.8
9,788	-		IAI46_00040	0.44	+0.3
9,802	+		IAI46_00040	0.45	+0.1
9,802	+		IAI46_00040	0.45	-1.0
9,802	+		IAI46_00040	0.45	-0.3
9,803	-		IAI46_00040	0.45	-1.9
9,826	-		IAI46_00040	0.47	-1.2
9,898	+		IAI46_00040	0.52	+0.2
9,898	+		IAI46_00040	0.52	-0.6
9,898	+		IAI46_00040	0.52	-0.3
9,898	+		IAI46_00040	0.52	+0.2
9,899	-		IAI46_00040	0.52	+0.0
9,899	-		IAI46_00040	0.52	-0.4
9,902	+		IAI46_00040	0.53	-0.2
9,902	+		IAI46_00040	0.53	-1.1
9,903	-		IAI46_00040	0.53	+0.2
9,903	-		IAI46_00040	0.53	-0.2
9,903	-		IAI46_00040	0.53	-0.8
9,903	-		IAI46_00040	0.53	-1.1
9,903	-		IAI46_00040	0.53	-0.3
9,903	-		IAI46_00040	0.53	-0.2
9,903	-		IAI46_00040	0.53	-0.6
9,943	-		IAI46_00040	0.56	+0.1
9,986	+		IAI46_00040	0.59	+0.1
10,021	+		IAI46_00040	0.62	+0.3
10,021	+		IAI46_00040	0.62	-0.3
10,197	-		IAI46_00040	0.76	-0.7
10,197	-		IAI46_00040	0.76	-0.4
10,197	-		IAI46_00040	0.76	-0.9
10,220	+		IAI46_00040	0.77	+1.0
10,221	-		IAI46_00040	0.77	-1.0
10,221	-		IAI46_00040	0.77	-0.1
10,221	-		IAI46_00040	0.77	+0.6
10,425	+				-0.1
10,425	+				-0.3
10,430	+				-0.5
10,462	-				-0.9
10,547	+				+0.3
10,548	-				+1.1
10,673	+		IAI46_00045	0.37	+2.1
10,674	-		IAI46_00045	0.37	-0.4
10,681	+		IAI46_00045	0.39	-0.3
10,684	+		IAI46_00045	0.40	+1.5
10,684	+		IAI46_00045	0.40	+0.5
10,684	+		IAI46_00045	0.40	-1.8
10,684	+		IAI46_00045	0.40	-0.6
10,684	+		IAI46_00045	0.40	-0.1
10,685	-		IAI46_00045	0.40	-0.8
10,685	-		IAI46_00045	0.40	-1.2
10,685	-		IAI46_00045	0.40	+0.2
10,685	-		IAI46_00045	0.40	-0.4
10,685	-		IAI46_00045	0.40	+0.4
10,749	+		IAI46_00045	0.59	+0.8
10,750	-		IAI46_00045	0.59	+0.2
10,750	-		IAI46_00045	0.59	+1.5
10,750	-		IAI46_00045	0.59	+0.5
10,767	+		IAI46_00045	0.64	+0.4
10,768	-		IAI46_00045	0.64	+1.5
10,768	-		IAI46_00045	0.64	-0.7
10,768	-		IAI46_00045	0.64	-0.4
10,793	+		IAI46_00045	0.72	+0.3
10,793	+		IAI46_00045	0.72	+0.5
10,793	+		IAI46_00045	0.72	+0.1
10,794	-		IAI46_00045	0.72	+0.3
10,796	+		IAI46_00045	0.72	+0.0
10,796	+		IAI46_00045	0.72	-0.8
10,797	-		IAI46_00045	0.73	-0.3
10,825	+		IAI46_00045	0.81	+0.4
10,825	+		IAI46_00045	0.81	+0.9
10,825	+		IAI46_00045	0.81	+0.3
10,826	-		IAI46_00045	0.81	-0.2
10,826	-		IAI46_00045	0.81	-0.7
10,849	+		IAI46_00045	0.88	+2.3
10,870	+				-0.4
10,870	+				-0.8
10,871	-				-0.1
10,871	-				-0.7
10,871	-				-0.6
10,879	+				+0.7
10,932	+				+1.3
10,932	+				-0.4
10,932	+				-0.1
10,932	+				+1.4
10,932	+				+0.4
10,933	-				+0.6
10,933	-				+0.6
10,933	-				-0.1
10,933	-				+0.3
10,933	-				+0.1
10,933	-				-0.8
10,933	-				+0.8
10,934	+				+0.1
10,934	+				-0.5
10,954	-				-1.0
10,994	+				+0.6
10,994	+				+0.6
10,995	-				+0.0
11,000	-				+0.3
11,084	+				+0.3
11,084	+				+0.4
11,084	+				+0.2
11,130	+				+0.5
11,130	+				+0.3
11,131	-				+1.1
11,153	+				-0.9
11,153	+				+0.5
11,154	-				+0.2
11,154	-				+0.1
11,157	+				+0.2
11,158	-				+0.2
11,180	+				-0.2
11,193	+				+0.3
11,199	+				-0.7
11,200	-				+0.7
11,222	-				-2.1
11,302	+		IAI46_00050	0.26	+0.1
11,302	+		IAI46_00050	0.26	-1.8
11,302	+		IAI46_00050	0.26	-0.2
11,302	+		IAI46_00050	0.26	-0.3
11,303	-		IAI46_00050	0.26	-0.2
11,303	-		IAI46_00050	0.26	-0.3
11,304	+		IAI46_00050	0.27	+0.3
11,305	-		IAI46_00050	0.27	-0.4
11,405	+		IAI46_00050	0.51	-0.9
11,421	+		IAI46_00050	0.55	-1.1
11,446	+		IAI46_00050	0.61	-0.1
11,447	-		IAI46_00050	0.61	+0.8
11,450	+		IAI46_00050	0.62	-0.4
11,450	+		IAI46_00050	0.62	+0.4
11,450	+		IAI46_00050	0.62	+0.8
11,451	-		IAI46_00050	0.62	+0.2
11,451	-		IAI46_00050	0.62	+0.1
11,451	-		IAI46_00050	0.62	-0.1
11,451	-		IAI46_00050	0.62	+1.3
11,451	-		IAI46_00050	0.62	-0.4
11,452	+		IAI46_00050	0.62	+0.4
11,452	+		IAI46_00050	0.62	-0.2
11,452	+		IAI46_00050	0.62	+0.1
11,453	-		IAI46_00050	0.63	-0.2
11,453	-		IAI46_00050	0.63	+0.0