Experiment: m.b. Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4584 and Echvi_4585 are separated by 13 nucleotides Echvi_4585 and Echvi_4586 overlap by 8 nucleotides Echvi_4586 and Echvi_4587 overlap by 14 nucleotides
Echvi_4584: Echvi_4584 - hypothetical protein, at 5,490,667 to 5,492,070
_4584
Echvi_4585: Echvi_4585 - Mg-chelatase subunit ChlD, at 5,492,084 to 5,493,808
_4585
Echvi_4586: Echvi_4586 - von Willebrand factor type A domain., at 5,493,801 to 5,494,808
_4586
Echvi_4587: Echvi_4587 - hypothetical protein, at 5,494,795 to 5,495,298
_4587
Position (kb)
5492
5493
5494 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 5491.208 kb on - strand, within Echvi_4584 at 5491.240 kb on - strand, within Echvi_4584 at 5491.724 kb on + strand, within Echvi_4584 at 5491.797 kb on + strand, within Echvi_4584 at 5491.798 kb on - strand, within Echvi_4584 at 5491.799 kb on + strand, within Echvi_4584 at 5491.799 kb on + strand, within Echvi_4584 at 5491.818 kb on + strand, within Echvi_4584 at 5491.819 kb on - strand, within Echvi_4584 at 5491.862 kb on - strand, within Echvi_4584 at 5491.895 kb on + strand, within Echvi_4584 at 5491.895 kb on + strand, within Echvi_4584 at 5491.911 kb on + strand, within Echvi_4584 at 5492.071 kb on - strand at 5492.071 kb on - strand at 5492.076 kb on + strand at 5492.076 kb on + strand at 5492.076 kb on + strand at 5492.077 kb on - strand at 5492.077 kb on - strand at 5492.077 kb on - strand at 5492.077 kb on - strand at 5492.564 kb on - strand, within Echvi_4585 at 5492.564 kb on - strand, within Echvi_4585 at 5492.566 kb on - strand, within Echvi_4585 at 5492.616 kb on + strand, within Echvi_4585 at 5492.617 kb on - strand, within Echvi_4585 at 5492.731 kb on - strand, within Echvi_4585 at 5492.753 kb on + strand, within Echvi_4585 at 5492.853 kb on - strand, within Echvi_4585 at 5492.969 kb on - strand, within Echvi_4585 at 5493.053 kb on + strand, within Echvi_4585 at 5493.166 kb on + strand, within Echvi_4585 at 5493.167 kb on - strand, within Echvi_4585 at 5493.292 kb on + strand, within Echvi_4585 at 5493.330 kb on + strand, within Echvi_4585 at 5493.372 kb on + strand, within Echvi_4585 at 5493.608 kb on + strand, within Echvi_4585 at 5493.608 kb on + strand, within Echvi_4585 at 5493.652 kb on + strand at 5493.713 kb on + strand at 5493.786 kb on - strand at 5493.808 kb on + strand at 5493.809 kb on - strand at 5493.809 kb on - strand at 5493.809 kb on - strand at 5493.901 kb on + strand at 5493.902 kb on - strand, within Echvi_4586 at 5493.907 kb on + strand, within Echvi_4586 at 5493.907 kb on + strand, within Echvi_4586 at 5493.974 kb on + strand, within Echvi_4586 at 5493.976 kb on + strand, within Echvi_4586 at 5493.976 kb on + strand, within Echvi_4586 at 5493.977 kb on - strand, within Echvi_4586 at 5494.016 kb on - strand, within Echvi_4586 at 5494.016 kb on - strand, within Echvi_4586 at 5494.104 kb on - strand, within Echvi_4586 at 5494.105 kb on + strand, within Echvi_4586 at 5494.106 kb on - strand, within Echvi_4586 at 5494.133 kb on + strand, within Echvi_4586 at 5494.197 kb on + strand, within Echvi_4586 at 5494.198 kb on - strand, within Echvi_4586 at 5494.198 kb on - strand, within Echvi_4586 at 5494.198 kb on - strand, within Echvi_4586 at 5494.209 kb on - strand, within Echvi_4586 at 5494.209 kb on - strand, within Echvi_4586 at 5494.348 kb on + strand, within Echvi_4586 at 5494.484 kb on + strand, within Echvi_4586 at 5494.746 kb on + strand at 5494.797 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Zinc 0.5 mM remove 5,491,208 - Echvi_4584 0.39 -0.9 5,491,240 - Echvi_4584 0.41 -0.8 5,491,724 + Echvi_4584 0.75 +0.6 5,491,797 + Echvi_4584 0.80 +0.7 5,491,798 - Echvi_4584 0.81 +0.8 5,491,799 + Echvi_4584 0.81 +0.6 5,491,799 + Echvi_4584 0.81 +0.1 5,491,818 + Echvi_4584 0.82 +0.9 5,491,819 - Echvi_4584 0.82 -0.3 5,491,862 - Echvi_4584 0.85 +1.1 5,491,895 + Echvi_4584 0.87 +0.8 5,491,895 + Echvi_4584 0.87 -0.1 5,491,911 + Echvi_4584 0.89 +0.1 5,492,071 - +0.9 5,492,071 - -0.2 5,492,076 + +0.5 5,492,076 + +0.5 5,492,076 + +0.3 5,492,077 - -3.9 5,492,077 - -1.2 5,492,077 - -0.3 5,492,077 - +0.4 5,492,564 - Echvi_4585 0.28 -1.3 5,492,564 - Echvi_4585 0.28 +2.5 5,492,566 - Echvi_4585 0.28 +0.4 5,492,616 + Echvi_4585 0.31 -0.4 5,492,617 - Echvi_4585 0.31 -0.5 5,492,731 - Echvi_4585 0.38 +0.7 5,492,753 + Echvi_4585 0.39 -0.7 5,492,853 - Echvi_4585 0.45 -0.1 5,492,969 - Echvi_4585 0.51 +1.6 5,493,053 + Echvi_4585 0.56 -1.0 5,493,166 + Echvi_4585 0.63 +1.0 5,493,167 - Echvi_4585 0.63 +0.6 5,493,292 + Echvi_4585 0.70 +0.4 5,493,330 + Echvi_4585 0.72 +0.4 5,493,372 + Echvi_4585 0.75 +0.0 5,493,608 + Echvi_4585 0.88 +0.0 5,493,608 + Echvi_4585 0.88 +0.7 5,493,652 + -0.6 5,493,713 + -1.9 5,493,786 - +0.7 5,493,808 + +0.1 5,493,809 - -0.3 5,493,809 - -0.7 5,493,809 - +0.0 5,493,901 + -1.0 5,493,902 - Echvi_4586 0.10 +0.1 5,493,907 + Echvi_4586 0.11 +0.3 5,493,907 + Echvi_4586 0.11 -0.7 5,493,974 + Echvi_4586 0.17 +0.7 5,493,976 + Echvi_4586 0.17 +1.5 5,493,976 + Echvi_4586 0.17 +0.6 5,493,977 - Echvi_4586 0.17 -1.2 5,494,016 - Echvi_4586 0.21 +1.0 5,494,016 - Echvi_4586 0.21 -0.2 5,494,104 - Echvi_4586 0.30 +0.0 5,494,105 + Echvi_4586 0.30 -1.1 5,494,106 - Echvi_4586 0.30 -1.4 5,494,133 + Echvi_4586 0.33 -2.0 5,494,197 + Echvi_4586 0.39 -0.2 5,494,198 - Echvi_4586 0.39 +0.1 5,494,198 - Echvi_4586 0.39 +0.3 5,494,198 - Echvi_4586 0.39 -0.3 5,494,209 - Echvi_4586 0.40 +0.4 5,494,209 - Echvi_4586 0.40 -0.2 5,494,348 + Echvi_4586 0.54 -0.8 5,494,484 + Echvi_4586 0.68 -0.9 5,494,746 + -0.4 5,494,797 - +0.5
Or see this region's nucleotide sequence