Experiment: m.b. Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4183 and Echvi_4184 are separated by 995 nucleotides Echvi_4184 and Echvi_4185 overlap by 4 nucleotides
Echvi_4183: Echvi_4183 - phage/plasmid-related protein TIGR03299, at 4,999,917 to 5,000,987
_4183
Echvi_4184: Echvi_4184 - Predicted transcriptional regulators, at 5,001,983 to 5,002,300
_4184
Echvi_4185: Echvi_4185 - HipA-like C-terminal domain./HipA-like N-terminal domain., at 5,002,297 to 5,003,568
_4185
Position (kb)
5001
5002
5003 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 5001.011 kb on + strand at 5001.011 kb on + strand at 5001.168 kb on + strand at 5001.169 kb on - strand at 5001.224 kb on + strand at 5001.224 kb on + strand at 5001.225 kb on - strand at 5001.225 kb on - strand at 5001.225 kb on - strand at 5001.225 kb on - strand at 5001.225 kb on - strand at 5001.264 kb on - strand at 5001.474 kb on + strand at 5001.475 kb on - strand at 5001.479 kb on - strand at 5001.482 kb on - strand at 5001.482 kb on - strand at 5001.503 kb on + strand at 5001.518 kb on + strand at 5001.519 kb on - strand at 5001.519 kb on - strand at 5001.524 kb on - strand at 5001.528 kb on - strand at 5001.528 kb on - strand at 5001.540 kb on + strand at 5001.541 kb on - strand at 5001.541 kb on - strand at 5001.541 kb on - strand at 5001.615 kb on + strand at 5001.666 kb on + strand at 5001.666 kb on + strand at 5001.701 kb on + strand at 5001.796 kb on + strand at 5001.797 kb on - strand at 5001.829 kb on + strand at 5001.829 kb on + strand at 5001.852 kb on - strand at 5001.888 kb on - strand at 5001.888 kb on - strand at 5001.896 kb on - strand at 5001.896 kb on - strand at 5001.896 kb on - strand at 5001.896 kb on - strand at 5001.898 kb on - strand at 5001.929 kb on - strand at 5002.066 kb on - strand, within Echvi_4184 at 5002.078 kb on + strand, within Echvi_4184 at 5002.078 kb on + strand, within Echvi_4184 at 5002.125 kb on + strand, within Echvi_4184 at 5002.126 kb on - strand, within Echvi_4184 at 5002.171 kb on - strand, within Echvi_4184 at 5002.210 kb on - strand, within Echvi_4184 at 5002.210 kb on - strand, within Echvi_4184 at 5002.210 kb on - strand, within Echvi_4184 at 5002.234 kb on - strand, within Echvi_4184 at 5002.234 kb on - strand, within Echvi_4184 at 5002.234 kb on - strand, within Echvi_4184 at 5002.234 kb on - strand, within Echvi_4184 at 5002.264 kb on + strand, within Echvi_4184 at 5002.331 kb on + strand at 5002.333 kb on + strand at 5002.333 kb on + strand at 5002.334 kb on - strand at 5002.364 kb on + strand at 5002.365 kb on - strand at 5002.381 kb on + strand at 5002.382 kb on - strand at 5002.386 kb on + strand at 5002.387 kb on - strand at 5002.429 kb on - strand, within Echvi_4185 at 5002.450 kb on + strand, within Echvi_4185 at 5002.450 kb on + strand, within Echvi_4185 at 5002.463 kb on + strand, within Echvi_4185 at 5002.463 kb on + strand, within Echvi_4185 at 5002.464 kb on - strand, within Echvi_4185 at 5002.476 kb on - strand, within Echvi_4185 at 5002.498 kb on + strand, within Echvi_4185 at 5002.513 kb on - strand, within Echvi_4185 at 5002.513 kb on - strand, within Echvi_4185 at 5002.513 kb on - strand, within Echvi_4185 at 5002.518 kb on + strand, within Echvi_4185 at 5002.652 kb on + strand, within Echvi_4185 at 5002.654 kb on + strand, within Echvi_4185 at 5002.654 kb on + strand, within Echvi_4185 at 5002.655 kb on - strand, within Echvi_4185 at 5002.680 kb on - strand, within Echvi_4185 at 5002.836 kb on + strand, within Echvi_4185 at 5002.836 kb on + strand, within Echvi_4185 at 5002.890 kb on - strand, within Echvi_4185 at 5002.911 kb on - strand, within Echvi_4185 at 5002.975 kb on + strand, within Echvi_4185 at 5002.976 kb on - strand, within Echvi_4185 at 5002.976 kb on - strand, within Echvi_4185 at 5003.127 kb on + strand, within Echvi_4185 at 5003.127 kb on + strand, within Echvi_4185 at 5003.156 kb on + strand, within Echvi_4185 at 5003.156 kb on + strand, within Echvi_4185 at 5003.157 kb on - strand, within Echvi_4185 at 5003.157 kb on - strand, within Echvi_4185 at 5003.161 kb on + strand, within Echvi_4185 at 5003.161 kb on + strand, within Echvi_4185 at 5003.162 kb on - strand, within Echvi_4185 at 5003.162 kb on - strand, within Echvi_4185 at 5003.255 kb on + strand, within Echvi_4185 at 5003.262 kb on + strand, within Echvi_4185 at 5003.263 kb on - strand, within Echvi_4185 at 5003.263 kb on - strand, within Echvi_4185 at 5003.292 kb on + strand, within Echvi_4185 at 5003.292 kb on + strand, within Echvi_4185 at 5003.292 kb on + strand, within Echvi_4185 at 5003.298 kb on - strand, within Echvi_4185 at 5003.298 kb on - strand, within Echvi_4185
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Zinc 0.5 mM remove 5,001,011 + +0.3 5,001,011 + -0.1 5,001,168 + -0.3 5,001,169 - +0.4 5,001,224 + +0.6 5,001,224 + -2.3 5,001,225 - -0.2 5,001,225 - +1.6 5,001,225 - +1.2 5,001,225 - +0.1 5,001,225 - -0.3 5,001,264 - +0.5 5,001,474 + +0.4 5,001,475 - -0.4 5,001,479 - -0.7 5,001,482 - +2.1 5,001,482 - -1.0 5,001,503 + -0.3 5,001,518 + -0.1 5,001,519 - +0.4 5,001,519 - -0.5 5,001,524 - -0.3 5,001,528 - -1.3 5,001,528 - -0.1 5,001,540 + +1.2 5,001,541 - -0.0 5,001,541 - -0.5 5,001,541 - +0.8 5,001,615 + -0.6 5,001,666 + +0.1 5,001,666 + -0.2 5,001,701 + -0.0 5,001,796 + +0.8 5,001,797 - +0.2 5,001,829 + -0.4 5,001,829 + +0.1 5,001,852 - -0.4 5,001,888 - -0.5 5,001,888 - -1.0 5,001,896 - +0.1 5,001,896 - -0.4 5,001,896 - +0.6 5,001,896 - -0.7 5,001,898 - -0.1 5,001,929 - -0.3 5,002,066 - Echvi_4184 0.26 -0.5 5,002,078 + Echvi_4184 0.30 +0.4 5,002,078 + Echvi_4184 0.30 +1.6 5,002,125 + Echvi_4184 0.45 +1.8 5,002,126 - Echvi_4184 0.45 +0.1 5,002,171 - Echvi_4184 0.59 +0.1 5,002,210 - Echvi_4184 0.71 +0.7 5,002,210 - Echvi_4184 0.71 -0.6 5,002,210 - Echvi_4184 0.71 +0.7 5,002,234 - Echvi_4184 0.79 +1.2 5,002,234 - Echvi_4184 0.79 +0.8 5,002,234 - Echvi_4184 0.79 -0.5 5,002,234 - Echvi_4184 0.79 -0.5 5,002,264 + Echvi_4184 0.88 +0.9 5,002,331 + +0.1 5,002,333 + -0.5 5,002,333 + +0.7 5,002,334 - +0.4 5,002,364 + -0.4 5,002,365 - -0.7 5,002,381 + +0.1 5,002,382 - -0.5 5,002,386 + -1.1 5,002,387 - +0.7 5,002,429 - Echvi_4185 0.10 +0.4 5,002,450 + Echvi_4185 0.12 -3.1 5,002,450 + Echvi_4185 0.12 -0.5 5,002,463 + Echvi_4185 0.13 +0.1 5,002,463 + Echvi_4185 0.13 -0.6 5,002,464 - Echvi_4185 0.13 -1.3 5,002,476 - Echvi_4185 0.14 -0.8 5,002,498 + Echvi_4185 0.16 -0.7 5,002,513 - Echvi_4185 0.17 -0.3 5,002,513 - Echvi_4185 0.17 -1.6 5,002,513 - Echvi_4185 0.17 -0.1 5,002,518 + Echvi_4185 0.17 -0.7 5,002,652 + Echvi_4185 0.28 -0.1 5,002,654 + Echvi_4185 0.28 +0.4 5,002,654 + Echvi_4185 0.28 +0.9 5,002,655 - Echvi_4185 0.28 -0.5 5,002,680 - Echvi_4185 0.30 -0.3 5,002,836 + Echvi_4185 0.42 -0.6 5,002,836 + Echvi_4185 0.42 -0.9 5,002,890 - Echvi_4185 0.47 +0.1 5,002,911 - Echvi_4185 0.48 -1.6 5,002,975 + Echvi_4185 0.53 +0.7 5,002,976 - Echvi_4185 0.53 +0.4 5,002,976 - Echvi_4185 0.53 +0.4 5,003,127 + Echvi_4185 0.65 -2.3 5,003,127 + Echvi_4185 0.65 -0.6 5,003,156 + Echvi_4185 0.68 -2.1 5,003,156 + Echvi_4185 0.68 -1.5 5,003,157 - Echvi_4185 0.68 -0.3 5,003,157 - Echvi_4185 0.68 -2.2 5,003,161 + Echvi_4185 0.68 +0.2 5,003,161 + Echvi_4185 0.68 +0.1 5,003,162 - Echvi_4185 0.68 -0.0 5,003,162 - Echvi_4185 0.68 +0.3 5,003,255 + Echvi_4185 0.75 +0.7 5,003,262 + Echvi_4185 0.76 -0.5 5,003,263 - Echvi_4185 0.76 +0.5 5,003,263 - Echvi_4185 0.76 -1.2 5,003,292 + Echvi_4185 0.78 -1.5 5,003,292 + Echvi_4185 0.78 +0.7 5,003,292 + Echvi_4185 0.78 +0.1 5,003,298 - Echvi_4185 0.79 +0.1 5,003,298 - Echvi_4185 0.79 +1.1
Or see this region's nucleotide sequence