Experiment: m.b. Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4142 and Echvi_4143 are separated by 88 nucleotides Echvi_4143 and Echvi_4144 are separated by 77 nucleotides Echvi_4144 and Echvi_4145 are separated by 216 nucleotides Echvi_4145 and Echvi_4146 are separated by 76 nucleotides
Echvi_4142: Echvi_4142 - Arabinose efflux permease, at 4,959,459 to 4,960,631
_4142
Echvi_4143: Echvi_4143 - hypothetical protein, at 4,960,720 to 4,961,046
_4143
Echvi_4144: Echvi_4144 - hypothetical protein, at 4,961,124 to 4,961,393
_4144
Echvi_4145: Echvi_4145 - Uncharacterized protein conserved in bacteria, at 4,961,610 to 4,961,975
_4145
Echvi_4146: Echvi_4146 - Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes, at 4,962,052 to 4,963,395
_4146
Position (kb)
4961
4962 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4960.718 kb on + strand at 4960.721 kb on + strand at 4960.858 kb on + strand, within Echvi_4143 at 4960.858 kb on + strand, within Echvi_4143 at 4960.859 kb on - strand, within Echvi_4143 at 4960.959 kb on + strand, within Echvi_4143 at 4960.959 kb on + strand, within Echvi_4143 at 4960.960 kb on - strand, within Echvi_4143 at 4961.001 kb on + strand, within Echvi_4143 at 4961.002 kb on - strand, within Echvi_4143 at 4961.013 kb on + strand, within Echvi_4143 at 4961.013 kb on + strand, within Echvi_4143 at 4961.014 kb on - strand at 4961.014 kb on - strand at 4961.014 kb on - strand at 4961.046 kb on + strand at 4961.047 kb on - strand at 4961.106 kb on - strand at 4961.126 kb on - strand at 4961.166 kb on + strand, within Echvi_4144 at 4961.237 kb on - strand, within Echvi_4144 at 4961.237 kb on - strand, within Echvi_4144 at 4961.237 kb on - strand, within Echvi_4144 at 4961.320 kb on - strand, within Echvi_4144 at 4961.328 kb on + strand, within Echvi_4144 at 4961.329 kb on - strand, within Echvi_4144 at 4961.334 kb on - strand, within Echvi_4144 at 4961.373 kb on + strand at 4961.374 kb on - strand at 4961.462 kb on + strand at 4961.462 kb on + strand at 4961.462 kb on + strand at 4961.467 kb on + strand at 4961.493 kb on - strand at 4961.493 kb on - strand at 4961.569 kb on + strand at 4961.646 kb on + strand at 4961.646 kb on + strand at 4961.646 kb on + strand at 4961.647 kb on - strand, within Echvi_4145 at 4961.655 kb on + strand, within Echvi_4145 at 4961.676 kb on - strand, within Echvi_4145 at 4961.714 kb on + strand, within Echvi_4145 at 4961.777 kb on + strand, within Echvi_4145 at 4961.814 kb on + strand, within Echvi_4145 at 4961.819 kb on - strand, within Echvi_4145 at 4961.934 kb on + strand, within Echvi_4145 at 4961.946 kb on + strand at 4961.947 kb on - strand at 4962.061 kb on - strand at 4962.061 kb on - strand at 4962.089 kb on + strand at 4962.095 kb on + strand at 4962.095 kb on + strand at 4962.096 kb on - strand at 4962.096 kb on - strand at 4962.110 kb on - strand at 4962.110 kb on - strand at 4962.110 kb on - strand at 4962.118 kb on + strand at 4962.186 kb on + strand at 4962.187 kb on - strand, within Echvi_4146 at 4962.213 kb on + strand, within Echvi_4146 at 4962.230 kb on + strand, within Echvi_4146 at 4962.230 kb on + strand, within Echvi_4146 at 4962.230 kb on + strand, within Echvi_4146 at 4962.236 kb on + strand, within Echvi_4146 at 4962.236 kb on + strand, within Echvi_4146 at 4962.237 kb on - strand, within Echvi_4146 at 4962.237 kb on - strand, within Echvi_4146 at 4962.237 kb on - strand, within Echvi_4146 at 4962.237 kb on - strand, within Echvi_4146 at 4962.249 kb on + strand, within Echvi_4146 at 4962.266 kb on + strand, within Echvi_4146 at 4962.267 kb on - strand, within Echvi_4146 at 4962.304 kb on + strand, within Echvi_4146 at 4962.304 kb on + strand, within Echvi_4146 at 4962.310 kb on + strand, within Echvi_4146 at 4962.310 kb on + strand, within Echvi_4146 at 4962.310 kb on + strand, within Echvi_4146 at 4962.311 kb on - strand, within Echvi_4146 at 4962.311 kb on - strand, within Echvi_4146 at 4962.311 kb on - strand, within Echvi_4146 at 4962.311 kb on - strand, within Echvi_4146 at 4962.336 kb on + strand, within Echvi_4146 at 4962.336 kb on + strand, within Echvi_4146 at 4962.341 kb on - strand, within Echvi_4146 at 4962.341 kb on - strand, within Echvi_4146 at 4962.341 kb on - strand, within Echvi_4146 at 4962.341 kb on - strand, within Echvi_4146 at 4962.341 kb on - strand, within Echvi_4146 at 4962.350 kb on - strand, within Echvi_4146 at 4962.359 kb on - strand, within Echvi_4146 at 4962.387 kb on + strand, within Echvi_4146 at 4962.389 kb on + strand, within Echvi_4146 at 4962.417 kb on + strand, within Echvi_4146 at 4962.477 kb on + strand, within Echvi_4146 at 4962.477 kb on + strand, within Echvi_4146 at 4962.477 kb on + strand, within Echvi_4146 at 4962.477 kb on + strand, within Echvi_4146 at 4962.480 kb on + strand, within Echvi_4146 at 4962.481 kb on - strand, within Echvi_4146 at 4962.481 kb on - strand, within Echvi_4146 at 4962.483 kb on + strand, within Echvi_4146 at 4962.484 kb on - strand, within Echvi_4146 at 4962.503 kb on + strand, within Echvi_4146 at 4962.503 kb on + strand, within Echvi_4146 at 4962.503 kb on + strand, within Echvi_4146 at 4962.504 kb on - strand, within Echvi_4146 at 4962.504 kb on - strand, within Echvi_4146 at 4962.504 kb on - strand, within Echvi_4146 at 4962.504 kb on - strand, within Echvi_4146 at 4962.505 kb on + strand, within Echvi_4146 at 4962.505 kb on + strand, within Echvi_4146 at 4962.506 kb on - strand, within Echvi_4146 at 4962.506 kb on - strand, within Echvi_4146 at 4962.506 kb on - strand, within Echvi_4146 at 4962.510 kb on + strand, within Echvi_4146 at 4962.510 kb on + strand, within Echvi_4146 at 4962.510 kb on + strand, within Echvi_4146 at 4962.517 kb on - strand, within Echvi_4146 at 4962.533 kb on + strand, within Echvi_4146 at 4962.533 kb on + strand, within Echvi_4146 at 4962.533 kb on + strand, within Echvi_4146 at 4962.534 kb on - strand, within Echvi_4146 at 4962.629 kb on - strand, within Echvi_4146 at 4962.679 kb on + strand, within Echvi_4146 at 4962.680 kb on - strand, within Echvi_4146 at 4962.682 kb on - strand, within Echvi_4146 at 4962.730 kb on + strand, within Echvi_4146 at 4962.730 kb on + strand, within Echvi_4146 at 4962.730 kb on + strand, within Echvi_4146 at 4962.731 kb on - strand, within Echvi_4146 at 4962.738 kb on + strand, within Echvi_4146 at 4962.773 kb on - strand, within Echvi_4146 at 4962.773 kb on - strand, within Echvi_4146 at 4962.777 kb on + strand, within Echvi_4146 at 4962.778 kb on - strand, within Echvi_4146 at 4962.822 kb on + strand, within Echvi_4146 at 4962.825 kb on + strand, within Echvi_4146 at 4962.873 kb on + strand, within Echvi_4146 at 4962.874 kb on - strand, within Echvi_4146 at 4962.874 kb on - strand, within Echvi_4146 at 4962.875 kb on + strand, within Echvi_4146 at 4962.875 kb on + strand, within Echvi_4146 at 4962.876 kb on - strand, within Echvi_4146 at 4962.897 kb on + strand, within Echvi_4146 at 4962.897 kb on + strand, within Echvi_4146 at 4962.897 kb on + strand, within Echvi_4146
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Zinc 0.5 mM remove 4,960,718 + +0.5 4,960,721 + -1.9 4,960,858 + Echvi_4143 0.42 -0.6 4,960,858 + Echvi_4143 0.42 -0.1 4,960,859 - Echvi_4143 0.43 -2.1 4,960,959 + Echvi_4143 0.73 +0.2 4,960,959 + Echvi_4143 0.73 -0.4 4,960,960 - Echvi_4143 0.73 -0.6 4,961,001 + Echvi_4143 0.86 -0.5 4,961,002 - Echvi_4143 0.86 -0.1 4,961,013 + Echvi_4143 0.90 -0.8 4,961,013 + Echvi_4143 0.90 -0.1 4,961,014 - +0.4 4,961,014 - +0.1 4,961,014 - -0.4 4,961,046 + -0.3 4,961,047 - -0.3 4,961,106 - -0.0 4,961,126 - -1.0 4,961,166 + Echvi_4144 0.16 +0.7 4,961,237 - Echvi_4144 0.42 -1.1 4,961,237 - Echvi_4144 0.42 -2.6 4,961,237 - Echvi_4144 0.42 -0.5 4,961,320 - Echvi_4144 0.73 -1.2 4,961,328 + Echvi_4144 0.76 -0.3 4,961,329 - Echvi_4144 0.76 +0.1 4,961,334 - Echvi_4144 0.78 -0.2 4,961,373 + -2.0 4,961,374 - -0.3 4,961,462 + +0.5 4,961,462 + -0.4 4,961,462 + -0.7 4,961,467 + +0.8 4,961,493 - +0.2 4,961,493 - -1.1 4,961,569 + +0.4 4,961,646 + +0.2 4,961,646 + -0.9 4,961,646 + -1.1 4,961,647 - Echvi_4145 0.10 -0.7 4,961,655 + Echvi_4145 0.12 -0.7 4,961,676 - Echvi_4145 0.18 +0.3 4,961,714 + Echvi_4145 0.28 +0.7 4,961,777 + Echvi_4145 0.46 -0.8 4,961,814 + Echvi_4145 0.56 +0.6 4,961,819 - Echvi_4145 0.57 -2.0 4,961,934 + Echvi_4145 0.89 -0.3 4,961,946 + +0.6 4,961,947 - +0.0 4,962,061 - -0.6 4,962,061 - -0.0 4,962,089 + -0.3 4,962,095 + +0.1 4,962,095 + +0.4 4,962,096 - +0.2 4,962,096 - +0.5 4,962,110 - +0.3 4,962,110 - -0.0 4,962,110 - +0.7 4,962,118 + +0.6 4,962,186 + +0.6 4,962,187 - Echvi_4146 0.10 -0.1 4,962,213 + Echvi_4146 0.12 +0.1 4,962,230 + Echvi_4146 0.13 -0.6 4,962,230 + Echvi_4146 0.13 -1.5 4,962,230 + Echvi_4146 0.13 -0.7 4,962,236 + Echvi_4146 0.14 +0.3 4,962,236 + Echvi_4146 0.14 +0.0 4,962,237 - Echvi_4146 0.14 -1.0 4,962,237 - Echvi_4146 0.14 -0.1 4,962,237 - Echvi_4146 0.14 -1.0 4,962,237 - Echvi_4146 0.14 -0.9 4,962,249 + Echvi_4146 0.15 -0.1 4,962,266 + Echvi_4146 0.16 -2.2 4,962,267 - Echvi_4146 0.16 +0.0 4,962,304 + Echvi_4146 0.19 +1.0 4,962,304 + Echvi_4146 0.19 -0.4 4,962,310 + Echvi_4146 0.19 +0.8 4,962,310 + Echvi_4146 0.19 +0.4 4,962,310 + Echvi_4146 0.19 +0.4 4,962,311 - Echvi_4146 0.19 -0.4 4,962,311 - Echvi_4146 0.19 -0.7 4,962,311 - Echvi_4146 0.19 +0.5 4,962,311 - Echvi_4146 0.19 +1.4 4,962,336 + Echvi_4146 0.21 -1.8 4,962,336 + Echvi_4146 0.21 +0.0 4,962,341 - Echvi_4146 0.22 +0.2 4,962,341 - Echvi_4146 0.22 -0.2 4,962,341 - Echvi_4146 0.22 +0.4 4,962,341 - Echvi_4146 0.22 -0.7 4,962,341 - Echvi_4146 0.22 -1.0 4,962,350 - Echvi_4146 0.22 -0.2 4,962,359 - Echvi_4146 0.23 +0.7 4,962,387 + Echvi_4146 0.25 -0.7 4,962,389 + Echvi_4146 0.25 -0.5 4,962,417 + Echvi_4146 0.27 -0.1 4,962,477 + Echvi_4146 0.32 +0.4 4,962,477 + Echvi_4146 0.32 -0.6 4,962,477 + Echvi_4146 0.32 +0.5 4,962,477 + Echvi_4146 0.32 +0.1 4,962,480 + Echvi_4146 0.32 +0.2 4,962,481 - Echvi_4146 0.32 -0.2 4,962,481 - Echvi_4146 0.32 +1.6 4,962,483 + Echvi_4146 0.32 -0.1 4,962,484 - Echvi_4146 0.32 +0.9 4,962,503 + Echvi_4146 0.34 +0.0 4,962,503 + Echvi_4146 0.34 -0.1 4,962,503 + Echvi_4146 0.34 -3.1 4,962,504 - Echvi_4146 0.34 +0.6 4,962,504 - Echvi_4146 0.34 +0.7 4,962,504 - Echvi_4146 0.34 +0.1 4,962,504 - Echvi_4146 0.34 +0.5 4,962,505 + Echvi_4146 0.34 -0.2 4,962,505 + Echvi_4146 0.34 -1.0 4,962,506 - Echvi_4146 0.34 +1.6 4,962,506 - Echvi_4146 0.34 -0.2 4,962,506 - Echvi_4146 0.34 +1.3 4,962,510 + Echvi_4146 0.34 -0.1 4,962,510 + Echvi_4146 0.34 -0.3 4,962,510 + Echvi_4146 0.34 -0.2 4,962,517 - Echvi_4146 0.35 -0.1 4,962,533 + Echvi_4146 0.36 +0.3 4,962,533 + Echvi_4146 0.36 +0.2 4,962,533 + Echvi_4146 0.36 +0.5 4,962,534 - Echvi_4146 0.36 +0.9 4,962,629 - Echvi_4146 0.43 +1.1 4,962,679 + Echvi_4146 0.47 -0.2 4,962,680 - Echvi_4146 0.47 +0.0 4,962,682 - Echvi_4146 0.47 +1.8 4,962,730 + Echvi_4146 0.50 +0.5 4,962,730 + Echvi_4146 0.50 +1.2 4,962,730 + Echvi_4146 0.50 -0.0 4,962,731 - Echvi_4146 0.51 +1.0 4,962,738 + Echvi_4146 0.51 +0.2 4,962,773 - Echvi_4146 0.54 +1.3 4,962,773 - Echvi_4146 0.54 -1.0 4,962,777 + Echvi_4146 0.54 -0.7 4,962,778 - Echvi_4146 0.54 -2.2 4,962,822 + Echvi_4146 0.57 +0.5 4,962,825 + Echvi_4146 0.58 +0.5 4,962,873 + Echvi_4146 0.61 -0.8 4,962,874 - Echvi_4146 0.61 +0.7 4,962,874 - Echvi_4146 0.61 -0.0 4,962,875 + Echvi_4146 0.61 -0.1 4,962,875 + Echvi_4146 0.61 -0.2 4,962,876 - Echvi_4146 0.61 +0.4 4,962,897 + Echvi_4146 0.63 +0.9 4,962,897 + Echvi_4146 0.63 -0.5 4,962,897 + Echvi_4146 0.63 +0.3
Or see this region's nucleotide sequence