Experiment: m.b. Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4033 and Echvi_4034 are separated by 321 nucleotides Echvi_4034 and Echvi_4035 are separated by 342 nucleotides
Echvi_4033: Echvi_4033 - glutamate 5-kinase (EC 2.7.2.11) (from data) , at 4,829,932 to 4,831,020
_4033
Echvi_4034: Echvi_4034 - hypothetical protein, at 4,831,342 to 4,832,262
_4034
Echvi_4035: Echvi_4035 - Excinuclease ATPase subunit, at 4,832,605 to 4,837,092
_4035
Position (kb)
4831
4832
4833 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4830.381 kb on + strand, within Echvi_4033 at 4830.580 kb on - strand, within Echvi_4033 at 4830.667 kb on + strand, within Echvi_4033 at 4830.690 kb on + strand, within Echvi_4033 at 4830.694 kb on + strand, within Echvi_4033 at 4830.755 kb on - strand, within Echvi_4033 at 4830.755 kb on - strand, within Echvi_4033 at 4830.759 kb on + strand, within Echvi_4033 at 4830.929 kb on - strand at 4830.994 kb on + strand at 4830.994 kb on + strand at 4830.994 kb on + strand at 4830.995 kb on - strand at 4830.995 kb on - strand at 4831.014 kb on + strand at 4831.014 kb on + strand at 4831.014 kb on + strand at 4831.015 kb on - strand at 4831.019 kb on - strand at 4831.019 kb on - strand at 4831.019 kb on - strand at 4831.094 kb on + strand at 4831.167 kb on + strand at 4831.271 kb on + strand at 4831.274 kb on - strand at 4831.279 kb on + strand at 4831.279 kb on + strand at 4831.290 kb on + strand at 4831.391 kb on + strand at 4831.392 kb on - strand at 4831.440 kb on + strand, within Echvi_4034 at 4831.441 kb on - strand, within Echvi_4034 at 4831.444 kb on - strand, within Echvi_4034 at 4831.444 kb on - strand, within Echvi_4034 at 4831.499 kb on + strand, within Echvi_4034 at 4831.499 kb on + strand, within Echvi_4034 at 4831.500 kb on - strand, within Echvi_4034 at 4831.500 kb on - strand, within Echvi_4034 at 4831.500 kb on - strand, within Echvi_4034 at 4831.500 kb on - strand, within Echvi_4034 at 4831.500 kb on - strand, within Echvi_4034 at 4831.501 kb on + strand, within Echvi_4034 at 4831.501 kb on + strand, within Echvi_4034 at 4831.502 kb on - strand, within Echvi_4034 at 4831.641 kb on + strand, within Echvi_4034 at 4831.641 kb on + strand, within Echvi_4034 at 4831.642 kb on - strand, within Echvi_4034 at 4831.737 kb on - strand, within Echvi_4034 at 4831.831 kb on - strand, within Echvi_4034 at 4831.882 kb on + strand, within Echvi_4034 at 4831.882 kb on + strand, within Echvi_4034 at 4831.883 kb on - strand, within Echvi_4034 at 4831.883 kb on - strand, within Echvi_4034 at 4831.885 kb on - strand, within Echvi_4034 at 4831.948 kb on - strand, within Echvi_4034 at 4831.974 kb on + strand, within Echvi_4034 at 4831.975 kb on - strand, within Echvi_4034 at 4832.247 kb on + strand at 4832.270 kb on + strand at 4832.271 kb on - strand at 4832.325 kb on - strand at 4832.325 kb on - strand at 4832.357 kb on + strand at 4832.358 kb on - strand at 4832.358 kb on - strand at 4832.404 kb on - strand at 4832.410 kb on + strand at 4832.463 kb on + strand at 4832.464 kb on - strand at 4832.464 kb on - strand at 4832.469 kb on + strand at 4832.469 kb on + strand at 4832.469 kb on + strand at 4832.470 kb on - strand at 4832.470 kb on - strand at 4832.496 kb on + strand at 4832.534 kb on + strand at 4832.538 kb on - strand at 4832.556 kb on - strand at 4832.556 kb on - strand at 4832.572 kb on - strand at 4832.611 kb on + strand at 4832.641 kb on + strand at 4832.670 kb on + strand at 4832.687 kb on - strand at 4832.687 kb on - strand at 4832.726 kb on + strand at 4832.908 kb on - strand at 4832.911 kb on + strand at 4832.911 kb on + strand at 4832.912 kb on - strand at 4832.912 kb on - strand at 4832.912 kb on - strand at 4832.912 kb on - strand at 4832.912 kb on - strand at 4832.912 kb on - strand at 4833.014 kb on + strand at 4833.175 kb on - strand, within Echvi_4035 at 4833.187 kb on + strand, within Echvi_4035 at 4833.211 kb on + strand, within Echvi_4035
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Zinc 0.5 mM remove 4,830,381 + Echvi_4033 0.41 -1.1 4,830,580 - Echvi_4033 0.60 +1.0 4,830,667 + Echvi_4033 0.67 -0.2 4,830,690 + Echvi_4033 0.70 -0.9 4,830,694 + Echvi_4033 0.70 +1.1 4,830,755 - Echvi_4033 0.76 -0.2 4,830,755 - Echvi_4033 0.76 +0.0 4,830,759 + Echvi_4033 0.76 +0.3 4,830,929 - +0.1 4,830,994 + +0.4 4,830,994 + +0.7 4,830,994 + +0.2 4,830,995 - -0.1 4,830,995 - +0.3 4,831,014 + +0.4 4,831,014 + +0.6 4,831,014 + -0.7 4,831,015 - -1.4 4,831,019 - +0.2 4,831,019 - +0.8 4,831,019 - +0.2 4,831,094 + -0.4 4,831,167 + +0.2 4,831,271 + +0.3 4,831,274 - +0.4 4,831,279 + +0.5 4,831,279 + -0.5 4,831,290 + +0.5 4,831,391 + -1.7 4,831,392 - +0.3 4,831,440 + Echvi_4034 0.11 +0.2 4,831,441 - Echvi_4034 0.11 +1.5 4,831,444 - Echvi_4034 0.11 +1.6 4,831,444 - Echvi_4034 0.11 -0.1 4,831,499 + Echvi_4034 0.17 +0.6 4,831,499 + Echvi_4034 0.17 +0.6 4,831,500 - Echvi_4034 0.17 +0.4 4,831,500 - Echvi_4034 0.17 -2.4 4,831,500 - Echvi_4034 0.17 -0.2 4,831,500 - Echvi_4034 0.17 +0.2 4,831,500 - Echvi_4034 0.17 +0.6 4,831,501 + Echvi_4034 0.17 -0.2 4,831,501 + Echvi_4034 0.17 +0.2 4,831,502 - Echvi_4034 0.17 +0.1 4,831,641 + Echvi_4034 0.32 +0.4 4,831,641 + Echvi_4034 0.32 +1.1 4,831,642 - Echvi_4034 0.33 -0.8 4,831,737 - Echvi_4034 0.43 +0.6 4,831,831 - Echvi_4034 0.53 +0.0 4,831,882 + Echvi_4034 0.59 +0.5 4,831,882 + Echvi_4034 0.59 +0.1 4,831,883 - Echvi_4034 0.59 -0.0 4,831,883 - Echvi_4034 0.59 +0.2 4,831,885 - Echvi_4034 0.59 -1.6 4,831,948 - Echvi_4034 0.66 +1.2 4,831,974 + Echvi_4034 0.69 +0.6 4,831,975 - Echvi_4034 0.69 -0.0 4,832,247 + +0.3 4,832,270 + -0.0 4,832,271 - +0.6 4,832,325 - -0.7 4,832,325 - -0.1 4,832,357 + +1.1 4,832,358 - +0.9 4,832,358 - -0.2 4,832,404 - -0.5 4,832,410 + -0.4 4,832,463 + -0.2 4,832,464 - +0.6 4,832,464 - -0.2 4,832,469 + +0.1 4,832,469 + +1.8 4,832,469 + -0.8 4,832,470 - +0.2 4,832,470 - -0.8 4,832,496 + +0.6 4,832,534 + +0.5 4,832,538 - +0.5 4,832,556 - +0.8 4,832,556 - +0.2 4,832,572 - -0.5 4,832,611 + -1.0 4,832,641 + +0.8 4,832,670 + -0.5 4,832,687 - -1.9 4,832,687 - -0.6 4,832,726 + -0.1 4,832,908 - -0.2 4,832,911 + -1.4 4,832,911 + +0.2 4,832,912 - -0.6 4,832,912 - -0.7 4,832,912 - -1.9 4,832,912 - -0.2 4,832,912 - +0.2 4,832,912 - +1.3 4,833,014 + +0.4 4,833,175 - Echvi_4035 0.13 +0.3 4,833,187 + Echvi_4035 0.13 +0.1 4,833,211 + Echvi_4035 0.14 -0.3
Or see this region's nucleotide sequence