Experiment: m.b. Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4028 and Echvi_4029 are separated by 51 nucleotides Echvi_4029 and Echvi_4030 are separated by 106 nucleotides
Echvi_4028: Echvi_4028 - Outer membrane receptor for ferrienterochelin and colicins, at 4,822,566 to 4,824,929
_4028
Echvi_4029: Echvi_4029 - Thiol:disulfide interchange protein, at 4,824,981 to 4,825,478
_4029
Echvi_4030: Echvi_4030 - Pirin-related protein, at 4,825,585 to 4,826,604
_4030
Position (kb)
4824
4825
4826 Strain fitness (log2 ratio)
-1
0
1
2
3 at 4824.000 kb on - strand, within Echvi_4028 at 4824.000 kb on - strand, within Echvi_4028 at 4824.053 kb on - strand, within Echvi_4028 at 4824.053 kb on - strand, within Echvi_4028 at 4824.065 kb on - strand, within Echvi_4028 at 4824.084 kb on - strand, within Echvi_4028 at 4824.126 kb on + strand, within Echvi_4028 at 4824.126 kb on + strand, within Echvi_4028 at 4824.126 kb on + strand, within Echvi_4028 at 4824.127 kb on - strand, within Echvi_4028 at 4824.246 kb on + strand, within Echvi_4028 at 4824.246 kb on + strand, within Echvi_4028 at 4824.246 kb on + strand, within Echvi_4028 at 4824.247 kb on - strand, within Echvi_4028 at 4824.247 kb on - strand, within Echvi_4028 at 4824.247 kb on - strand, within Echvi_4028 at 4824.247 kb on - strand, within Echvi_4028 at 4824.251 kb on + strand, within Echvi_4028 at 4824.251 kb on + strand, within Echvi_4028 at 4824.252 kb on - strand, within Echvi_4028 at 4824.252 kb on - strand, within Echvi_4028 at 4824.315 kb on + strand, within Echvi_4028 at 4824.315 kb on + strand, within Echvi_4028 at 4824.316 kb on - strand, within Echvi_4028 at 4824.316 kb on - strand, within Echvi_4028 at 4824.316 kb on - strand, within Echvi_4028 at 4824.316 kb on - strand, within Echvi_4028 at 4824.339 kb on - strand, within Echvi_4028 at 4824.383 kb on - strand, within Echvi_4028 at 4824.415 kb on + strand, within Echvi_4028 at 4824.415 kb on + strand, within Echvi_4028 at 4824.499 kb on - strand, within Echvi_4028 at 4824.598 kb on - strand, within Echvi_4028 at 4824.683 kb on - strand, within Echvi_4028 at 4824.702 kb on - strand at 4824.753 kb on + strand at 4824.770 kb on - strand at 4824.803 kb on - strand at 4824.815 kb on - strand at 4824.865 kb on - strand at 4824.866 kb on + strand at 4824.932 kb on + strand at 4824.933 kb on - strand at 4825.040 kb on + strand, within Echvi_4029 at 4825.148 kb on + strand, within Echvi_4029 at 4825.152 kb on + strand, within Echvi_4029 at 4825.219 kb on - strand, within Echvi_4029 at 4825.324 kb on + strand, within Echvi_4029 at 4825.333 kb on + strand, within Echvi_4029 at 4825.343 kb on + strand, within Echvi_4029 at 4825.419 kb on + strand, within Echvi_4029 at 4825.593 kb on + strand at 4825.831 kb on - strand, within Echvi_4030 at 4825.997 kb on + strand, within Echvi_4030 at 4825.997 kb on + strand, within Echvi_4030 at 4826.142 kb on - strand, within Echvi_4030 at 4826.142 kb on - strand, within Echvi_4030 at 4826.142 kb on - strand, within Echvi_4030 at 4826.281 kb on + strand, within Echvi_4030 at 4826.282 kb on - strand, within Echvi_4030 at 4826.282 kb on - strand, within Echvi_4030 at 4826.282 kb on - strand, within Echvi_4030
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Zinc 0.5 mM remove 4,824,000 - Echvi_4028 0.61 +1.2 4,824,000 - Echvi_4028 0.61 -0.2 4,824,053 - Echvi_4028 0.63 -0.6 4,824,053 - Echvi_4028 0.63 -0.6 4,824,065 - Echvi_4028 0.63 +0.6 4,824,084 - Echvi_4028 0.64 -0.4 4,824,126 + Echvi_4028 0.66 +1.1 4,824,126 + Echvi_4028 0.66 -0.2 4,824,126 + Echvi_4028 0.66 +0.0 4,824,127 - Echvi_4028 0.66 -0.1 4,824,246 + Echvi_4028 0.71 +0.1 4,824,246 + Echvi_4028 0.71 +0.8 4,824,246 + Echvi_4028 0.71 +0.6 4,824,247 - Echvi_4028 0.71 +1.0 4,824,247 - Echvi_4028 0.71 +0.1 4,824,247 - Echvi_4028 0.71 -0.1 4,824,247 - Echvi_4028 0.71 +0.6 4,824,251 + Echvi_4028 0.71 -1.5 4,824,251 + Echvi_4028 0.71 -0.8 4,824,252 - Echvi_4028 0.71 +0.1 4,824,252 - Echvi_4028 0.71 +0.0 4,824,315 + Echvi_4028 0.74 +0.1 4,824,315 + Echvi_4028 0.74 -0.5 4,824,316 - Echvi_4028 0.74 -0.1 4,824,316 - Echvi_4028 0.74 -0.3 4,824,316 - Echvi_4028 0.74 +3.0 4,824,316 - Echvi_4028 0.74 -0.3 4,824,339 - Echvi_4028 0.75 -0.1 4,824,383 - Echvi_4028 0.77 +0.2 4,824,415 + Echvi_4028 0.78 -0.2 4,824,415 + Echvi_4028 0.78 +0.5 4,824,499 - Echvi_4028 0.82 +1.2 4,824,598 - Echvi_4028 0.86 +0.5 4,824,683 - Echvi_4028 0.90 -0.4 4,824,702 - -0.8 4,824,753 + +0.4 4,824,770 - +1.1 4,824,803 - -0.2 4,824,815 - -0.2 4,824,865 - +0.1 4,824,866 + +0.0 4,824,932 + -0.6 4,824,933 - -1.7 4,825,040 + Echvi_4029 0.12 +0.0 4,825,148 + Echvi_4029 0.34 +0.6 4,825,152 + Echvi_4029 0.34 -0.2 4,825,219 - Echvi_4029 0.48 +0.2 4,825,324 + Echvi_4029 0.69 +0.8 4,825,333 + Echvi_4029 0.71 +0.4 4,825,343 + Echvi_4029 0.73 +1.0 4,825,419 + Echvi_4029 0.88 +2.3 4,825,593 + +0.7 4,825,831 - Echvi_4030 0.24 -0.2 4,825,997 + Echvi_4030 0.40 -0.0 4,825,997 + Echvi_4030 0.40 +0.9 4,826,142 - Echvi_4030 0.55 -0.4 4,826,142 - Echvi_4030 0.55 -1.1 4,826,142 - Echvi_4030 0.55 -0.5 4,826,281 + Echvi_4030 0.68 -0.9 4,826,282 - Echvi_4030 0.68 -0.3 4,826,282 - Echvi_4030 0.68 -0.2 4,826,282 - Echvi_4030 0.68 +0.0
Or see this region's nucleotide sequence