Experiment: m.b. Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_1794 and Echvi_1795 are separated by 824 nucleotides Echvi_1795 and Echvi_1796 are separated by 549 nucleotides
Echvi_1794: Echvi_1794 - 5S, at 2,110,171 to 2,110,282
_1794
Echvi_1795: Echvi_1795 - hypothetical protein, at 2,111,107 to 2,111,424
_1795
Echvi_1796: Echvi_1796 - ATPase components of ABC transporters with duplicated ATPase domains, at 2,111,974 to 2,113,884
_1796
Position (kb)
2111
2112 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2110.130 kb on - strand at 2110.172 kb on - strand at 2110.625 kb on + strand at 2110.625 kb on + strand at 2110.647 kb on + strand at 2110.731 kb on + strand at 2110.732 kb on - strand at 2110.768 kb on + strand at 2110.768 kb on + strand at 2110.942 kb on + strand at 2110.942 kb on + strand at 2110.942 kb on + strand at 2110.944 kb on + strand at 2110.944 kb on + strand at 2110.972 kb on - strand at 2111.068 kb on - strand at 2111.075 kb on - strand at 2111.075 kb on - strand at 2111.075 kb on - strand at 2111.075 kb on - strand at 2111.075 kb on - strand at 2111.075 kb on - strand at 2111.078 kb on - strand at 2111.078 kb on - strand at 2111.079 kb on + strand at 2111.116 kb on - strand at 2111.181 kb on + strand, within Echvi_1795 at 2111.181 kb on + strand, within Echvi_1795 at 2111.183 kb on + strand, within Echvi_1795 at 2111.187 kb on + strand, within Echvi_1795 at 2111.188 kb on - strand, within Echvi_1795 at 2111.188 kb on - strand, within Echvi_1795 at 2111.188 kb on - strand, within Echvi_1795 at 2111.248 kb on - strand, within Echvi_1795 at 2111.256 kb on + strand, within Echvi_1795 at 2111.257 kb on - strand, within Echvi_1795 at 2111.281 kb on + strand, within Echvi_1795 at 2111.282 kb on - strand, within Echvi_1795 at 2111.388 kb on - strand, within Echvi_1795 at 2111.416 kb on - strand at 2111.418 kb on + strand at 2111.418 kb on + strand at 2111.423 kb on - strand at 2111.471 kb on + strand at 2111.483 kb on + strand at 2111.510 kb on - strand at 2111.511 kb on + strand at 2111.512 kb on - strand at 2111.568 kb on - strand at 2111.580 kb on - strand at 2111.582 kb on - strand at 2111.582 kb on - strand at 2111.582 kb on - strand at 2111.582 kb on - strand at 2111.585 kb on + strand at 2111.592 kb on + strand at 2111.592 kb on + strand at 2111.592 kb on + strand at 2111.593 kb on - strand at 2111.593 kb on - strand at 2111.594 kb on + strand at 2111.594 kb on + strand at 2111.594 kb on + strand at 2111.594 kb on + strand at 2111.595 kb on - strand at 2111.595 kb on - strand at 2111.595 kb on - strand at 2111.595 kb on - strand at 2111.595 kb on - strand at 2111.642 kb on - strand at 2111.642 kb on - strand at 2111.645 kb on + strand at 2111.646 kb on - strand at 2111.654 kb on + strand at 2111.654 kb on + strand at 2111.671 kb on - strand at 2111.706 kb on - strand at 2111.716 kb on + strand at 2111.717 kb on - strand at 2111.723 kb on + strand at 2111.750 kb on - strand at 2111.769 kb on + strand at 2111.769 kb on + strand at 2111.769 kb on + strand at 2111.793 kb on - strand at 2111.835 kb on + strand at 2111.851 kb on - strand at 2111.874 kb on + strand at 2111.909 kb on + strand at 2111.922 kb on + strand at 2111.938 kb on + strand at 2111.987 kb on - strand at 2112.089 kb on + strand at 2112.090 kb on - strand at 2112.090 kb on - strand at 2112.164 kb on + strand at 2112.187 kb on + strand, within Echvi_1796 at 2112.187 kb on + strand, within Echvi_1796 at 2112.188 kb on - strand, within Echvi_1796 at 2112.221 kb on + strand, within Echvi_1796 at 2112.221 kb on + strand, within Echvi_1796 at 2112.221 kb on + strand, within Echvi_1796 at 2112.221 kb on + strand, within Echvi_1796 at 2112.221 kb on + strand, within Echvi_1796 at 2112.222 kb on - strand, within Echvi_1796 at 2112.222 kb on - strand, within Echvi_1796 at 2112.225 kb on + strand, within Echvi_1796 at 2112.225 kb on + strand at 2112.226 kb on - strand, within Echvi_1796 at 2112.239 kb on + strand, within Echvi_1796 at 2112.284 kb on - strand, within Echvi_1796 at 2112.343 kb on - strand, within Echvi_1796 at 2112.343 kb on - strand, within Echvi_1796 at 2112.344 kb on + strand, within Echvi_1796 at 2112.345 kb on - strand, within Echvi_1796 at 2112.414 kb on - strand, within Echvi_1796 at 2112.414 kb on - strand, within Echvi_1796
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Zinc 0.5 mM remove 2,110,130 - -0.5 2,110,172 - -0.8 2,110,625 + -0.4 2,110,625 + -0.2 2,110,647 + -0.6 2,110,731 + +0.3 2,110,732 - -2.4 2,110,768 + +1.4 2,110,768 + -1.7 2,110,942 + -1.0 2,110,942 + -0.3 2,110,942 + -0.0 2,110,944 + +0.6 2,110,944 + -0.3 2,110,972 - -0.0 2,111,068 - -1.7 2,111,075 - -0.8 2,111,075 - +0.1 2,111,075 - -0.5 2,111,075 - -0.5 2,111,075 - -2.4 2,111,075 - -2.5 2,111,078 - -0.6 2,111,078 - +0.7 2,111,079 + -0.8 2,111,116 - -0.7 2,111,181 + Echvi_1795 0.23 +0.2 2,111,181 + Echvi_1795 0.23 +0.9 2,111,183 + Echvi_1795 0.24 +0.9 2,111,187 + Echvi_1795 0.25 +0.5 2,111,188 - Echvi_1795 0.25 -2.2 2,111,188 - Echvi_1795 0.25 +2.4 2,111,188 - Echvi_1795 0.25 -0.2 2,111,248 - Echvi_1795 0.44 +0.9 2,111,256 + Echvi_1795 0.47 +0.6 2,111,257 - Echvi_1795 0.47 +0.3 2,111,281 + Echvi_1795 0.55 -0.3 2,111,282 - Echvi_1795 0.55 +0.2 2,111,388 - Echvi_1795 0.88 -0.2 2,111,416 - +0.8 2,111,418 + -0.4 2,111,418 + +0.5 2,111,423 - -0.4 2,111,471 + -0.8 2,111,483 + +0.2 2,111,510 - +0.6 2,111,511 + +2.3 2,111,512 - +0.1 2,111,568 - -1.8 2,111,580 - -0.4 2,111,582 - +0.4 2,111,582 - +0.3 2,111,582 - -0.4 2,111,582 - -0.8 2,111,585 + +0.2 2,111,592 + -0.1 2,111,592 + -0.5 2,111,592 + -1.8 2,111,593 - -0.2 2,111,593 - +0.6 2,111,594 + -0.4 2,111,594 + +0.1 2,111,594 + +0.5 2,111,594 + +0.2 2,111,595 - -1.6 2,111,595 - -0.5 2,111,595 - +0.4 2,111,595 - +1.1 2,111,595 - -0.2 2,111,642 - +0.4 2,111,642 - +0.4 2,111,645 + -1.1 2,111,646 - +1.3 2,111,654 + -1.4 2,111,654 + +2.1 2,111,671 - +0.7 2,111,706 - -0.0 2,111,716 + +0.0 2,111,717 - +0.8 2,111,723 + +0.4 2,111,750 - +0.2 2,111,769 + -0.4 2,111,769 + -0.2 2,111,769 + +0.7 2,111,793 - -0.4 2,111,835 + -0.2 2,111,851 - -2.3 2,111,874 + -0.1 2,111,909 + +0.3 2,111,922 + -0.4 2,111,938 + -1.0 2,111,987 - -1.8 2,112,089 + +0.8 2,112,090 - +0.2 2,112,090 - -1.6 2,112,164 + -0.6 2,112,187 + Echvi_1796 0.11 +0.8 2,112,187 + Echvi_1796 0.11 +0.3 2,112,188 - Echvi_1796 0.11 -0.1 2,112,221 + Echvi_1796 0.13 -0.7 2,112,221 + Echvi_1796 0.13 -0.4 2,112,221 + Echvi_1796 0.13 -1.5 2,112,221 + Echvi_1796 0.13 +0.1 2,112,221 + Echvi_1796 0.13 -0.2 2,112,222 - Echvi_1796 0.13 -0.1 2,112,222 - Echvi_1796 0.13 -0.4 2,112,225 + Echvi_1796 0.13 -0.5 2,112,225 + +2.6 2,112,226 - Echvi_1796 0.13 -1.2 2,112,239 + Echvi_1796 0.14 +1.1 2,112,284 - Echvi_1796 0.16 -1.4 2,112,343 - Echvi_1796 0.19 +0.4 2,112,343 - Echvi_1796 0.19 +1.6 2,112,344 + Echvi_1796 0.19 +0.4 2,112,345 - Echvi_1796 0.19 +0.2 2,112,414 - Echvi_1796 0.23 +0.0 2,112,414 - Echvi_1796 0.23 +0.6
Or see this region's nucleotide sequence