Experiment: m.b. Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_1335 and Echvi_1336 are separated by 175 nucleotides Echvi_1336 and Echvi_1337 are separated by 63 nucleotides Echvi_1337 and Echvi_1338 are separated by 79 nucleotides
Echvi_1335: Echvi_1335 - Universal stress protein UspA and related nucleotide-binding proteins, at 1,546,394 to 1,547,308
_1335
Echvi_1336: Echvi_1336 - 2'-5' RNA ligase, at 1,547,484 to 1,548,110
_1336
Echvi_1337: Echvi_1337 - ribosomal protein L19, bacterial type, at 1,548,174 to 1,548,539
_1337
Echvi_1338: Echvi_1338 - tRNA (guanine-N1)-methyltransferase, at 1,548,619 to 1,549,326
_1338
Position (kb)
1547
1548
1549 Strain fitness (log2 ratio)
-2
-1
0
1 at 1546.551 kb on - strand, within Echvi_1335 at 1546.551 kb on - strand, within Echvi_1335 at 1546.610 kb on - strand, within Echvi_1335 at 1546.614 kb on - strand, within Echvi_1335 at 1546.664 kb on - strand, within Echvi_1335 at 1546.752 kb on + strand, within Echvi_1335 at 1546.753 kb on - strand, within Echvi_1335 at 1546.762 kb on + strand, within Echvi_1335 at 1546.763 kb on - strand, within Echvi_1335 at 1546.763 kb on - strand, within Echvi_1335 at 1546.763 kb on - strand, within Echvi_1335 at 1546.763 kb on - strand, within Echvi_1335 at 1546.820 kb on + strand, within Echvi_1335 at 1546.828 kb on + strand, within Echvi_1335 at 1546.856 kb on + strand, within Echvi_1335 at 1546.883 kb on - strand, within Echvi_1335 at 1546.988 kb on + strand, within Echvi_1335 at 1546.989 kb on - strand, within Echvi_1335 at 1547.061 kb on - strand, within Echvi_1335 at 1547.124 kb on - strand, within Echvi_1335 at 1547.146 kb on - strand, within Echvi_1335 at 1547.149 kb on + strand, within Echvi_1335 at 1547.149 kb on + strand, within Echvi_1335 at 1547.150 kb on - strand, within Echvi_1335 at 1547.158 kb on + strand, within Echvi_1335 at 1547.158 kb on + strand, within Echvi_1335 at 1547.211 kb on - strand, within Echvi_1335 at 1547.246 kb on + strand at 1547.294 kb on - strand at 1547.294 kb on - strand at 1547.294 kb on - strand at 1547.309 kb on - strand at 1547.317 kb on + strand at 1547.339 kb on + strand at 1547.339 kb on + strand at 1547.343 kb on + strand at 1547.344 kb on - strand at 1547.354 kb on + strand at 1547.418 kb on - strand at 1547.423 kb on + strand at 1547.443 kb on + strand at 1547.443 kb on + strand at 1547.473 kb on + strand at 1547.474 kb on - strand at 1547.474 kb on - strand at 1547.505 kb on + strand at 1547.508 kb on + strand at 1547.508 kb on + strand at 1547.514 kb on - strand at 1547.524 kb on - strand at 1547.612 kb on - strand, within Echvi_1336 at 1547.635 kb on - strand, within Echvi_1336 at 1547.635 kb on - strand, within Echvi_1336 at 1547.804 kb on + strand, within Echvi_1336 at 1547.805 kb on - strand, within Echvi_1336 at 1547.805 kb on - strand, within Echvi_1336 at 1547.805 kb on - strand, within Echvi_1336 at 1547.870 kb on + strand, within Echvi_1336 at 1547.915 kb on + strand, within Echvi_1336 at 1547.916 kb on - strand, within Echvi_1336 at 1548.061 kb on + strand at 1548.084 kb on - strand at 1548.084 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Zinc 0.5 mM remove 1,546,551 - Echvi_1335 0.17 +0.4 1,546,551 - Echvi_1335 0.17 +0.0 1,546,610 - Echvi_1335 0.24 +0.9 1,546,614 - Echvi_1335 0.24 +0.3 1,546,664 - Echvi_1335 0.30 -0.4 1,546,752 + Echvi_1335 0.39 -0.4 1,546,753 - Echvi_1335 0.39 -0.1 1,546,762 + Echvi_1335 0.40 +0.2 1,546,763 - Echvi_1335 0.40 +0.2 1,546,763 - Echvi_1335 0.40 +1.6 1,546,763 - Echvi_1335 0.40 +0.7 1,546,763 - Echvi_1335 0.40 +0.8 1,546,820 + Echvi_1335 0.47 -0.1 1,546,828 + Echvi_1335 0.47 +0.2 1,546,856 + Echvi_1335 0.50 -1.0 1,546,883 - Echvi_1335 0.53 -1.0 1,546,988 + Echvi_1335 0.65 -0.0 1,546,989 - Echvi_1335 0.65 -0.6 1,547,061 - Echvi_1335 0.73 -2.2 1,547,124 - Echvi_1335 0.80 -0.1 1,547,146 - Echvi_1335 0.82 +1.4 1,547,149 + Echvi_1335 0.83 -0.4 1,547,149 + Echvi_1335 0.83 -1.1 1,547,150 - Echvi_1335 0.83 -0.3 1,547,158 + Echvi_1335 0.83 +1.0 1,547,158 + Echvi_1335 0.83 +0.2 1,547,211 - Echvi_1335 0.89 -0.3 1,547,246 + +0.3 1,547,294 - +0.7 1,547,294 - +0.8 1,547,294 - +0.2 1,547,309 - -0.7 1,547,317 + +0.3 1,547,339 + -0.7 1,547,339 + -0.2 1,547,343 + +0.6 1,547,344 - -0.0 1,547,354 + +0.3 1,547,418 - +0.7 1,547,423 + +0.0 1,547,443 + +0.7 1,547,443 + -1.2 1,547,473 + +0.1 1,547,474 - +0.2 1,547,474 - +0.5 1,547,505 + +0.4 1,547,508 + +0.1 1,547,508 + +0.7 1,547,514 - -1.7 1,547,524 - +0.6 1,547,612 - Echvi_1336 0.20 -0.7 1,547,635 - Echvi_1336 0.24 -0.0 1,547,635 - Echvi_1336 0.24 -0.0 1,547,804 + Echvi_1336 0.51 -0.6 1,547,805 - Echvi_1336 0.51 -1.7 1,547,805 - Echvi_1336 0.51 -0.7 1,547,805 - Echvi_1336 0.51 -1.1 1,547,870 + Echvi_1336 0.62 -0.2 1,547,915 + Echvi_1336 0.69 -1.7 1,547,916 - Echvi_1336 0.69 -0.6 1,548,061 + -0.0 1,548,084 - -1.9 1,548,084 - +0.2
Or see this region's nucleotide sequence