Experiment: m.b. Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_1310 and Echvi_1311 are separated by 158 nucleotides Echvi_1311 and Echvi_1312 are separated by 169 nucleotides
Echvi_1310: Echvi_1310 - Prolyl oligopeptidase family., at 1,508,695 to 1,511,127
_1310
Echvi_1311: Echvi_1311 - gliding motility-associated lipoprotein GldJ, at 1,511,286 to 1,512,515
_1311
Echvi_1312: Echvi_1312 - transcription-repair coupling factor (mfd), at 1,512,685 to 1,516,035
_1312
Position (kb)
1511
1512
1513 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 1510.322 kb on + strand, within Echvi_1310 at 1510.323 kb on - strand, within Echvi_1310 at 1510.323 kb on - strand, within Echvi_1310 at 1510.383 kb on + strand, within Echvi_1310 at 1510.384 kb on - strand, within Echvi_1310 at 1510.427 kb on + strand, within Echvi_1310 at 1510.428 kb on - strand, within Echvi_1310 at 1510.436 kb on - strand, within Echvi_1310 at 1510.436 kb on - strand, within Echvi_1310 at 1510.436 kb on - strand, within Echvi_1310 at 1510.448 kb on + strand, within Echvi_1310 at 1510.510 kb on + strand, within Echvi_1310 at 1510.510 kb on + strand, within Echvi_1310 at 1510.510 kb on + strand, within Echvi_1310 at 1510.606 kb on - strand, within Echvi_1310 at 1510.674 kb on + strand, within Echvi_1310 at 1510.675 kb on - strand, within Echvi_1310 at 1510.675 kb on - strand, within Echvi_1310 at 1510.691 kb on - strand, within Echvi_1310 at 1510.724 kb on + strand, within Echvi_1310 at 1510.724 kb on + strand, within Echvi_1310 at 1510.724 kb on + strand, within Echvi_1310 at 1510.724 kb on + strand, within Echvi_1310 at 1510.725 kb on - strand, within Echvi_1310 at 1510.808 kb on - strand, within Echvi_1310 at 1510.830 kb on + strand, within Echvi_1310 at 1510.832 kb on + strand, within Echvi_1310 at 1510.879 kb on - strand, within Echvi_1310 at 1510.891 kb on + strand at 1510.907 kb on - strand at 1510.925 kb on + strand at 1510.988 kb on - strand at 1511.087 kb on - strand at 1511.096 kb on + strand at 1511.097 kb on - strand at 1511.127 kb on + strand at 1511.127 kb on + strand at 1511.128 kb on - strand at 1511.167 kb on + strand at 1511.177 kb on - strand at 1511.180 kb on - strand at 1511.180 kb on - strand at 1511.196 kb on - strand at 1511.196 kb on - strand at 1511.287 kb on + strand at 1511.287 kb on + strand at 1511.287 kb on + strand at 1511.287 kb on + strand at 1511.287 kb on + strand at 1511.287 kb on + strand at 1511.287 kb on + strand at 1511.288 kb on - strand at 1511.342 kb on + strand at 1511.372 kb on + strand at 1511.372 kb on + strand at 1511.373 kb on - strand at 1511.373 kb on - strand at 1511.394 kb on + strand at 1511.395 kb on - strand at 1511.395 kb on - strand at 1511.395 kb on - strand at 1511.408 kb on + strand at 1511.408 kb on + strand at 1511.408 kb on + strand at 1511.409 kb on - strand, within Echvi_1311 at 1511.409 kb on - strand, within Echvi_1311 at 1511.417 kb on + strand, within Echvi_1311 at 1511.418 kb on - strand, within Echvi_1311 at 1511.419 kb on + strand, within Echvi_1311 at 1511.419 kb on + strand, within Echvi_1311 at 1511.429 kb on - strand, within Echvi_1311 at 1511.432 kb on + strand, within Echvi_1311 at 1511.432 kb on + strand, within Echvi_1311 at 1511.433 kb on - strand, within Echvi_1311 at 1511.433 kb on - strand, within Echvi_1311 at 1511.433 kb on - strand, within Echvi_1311 at 1511.533 kb on + strand, within Echvi_1311 at 1511.535 kb on + strand, within Echvi_1311 at 1511.535 kb on + strand, within Echvi_1311 at 1511.535 kb on + strand, within Echvi_1311 at 1511.535 kb on + strand, within Echvi_1311 at 1511.535 kb on + strand, within Echvi_1311 at 1511.535 kb on + strand, within Echvi_1311 at 1511.535 kb on + strand, within Echvi_1311 at 1511.535 kb on + strand, within Echvi_1311 at 1511.536 kb on - strand, within Echvi_1311 at 1511.536 kb on - strand, within Echvi_1311 at 1511.536 kb on - strand, within Echvi_1311 at 1511.544 kb on + strand, within Echvi_1311 at 1511.575 kb on + strand, within Echvi_1311 at 1511.605 kb on + strand, within Echvi_1311 at 1511.605 kb on + strand, within Echvi_1311 at 1511.606 kb on - strand, within Echvi_1311 at 1511.662 kb on + strand, within Echvi_1311 at 1511.663 kb on - strand, within Echvi_1311 at 1511.682 kb on - strand, within Echvi_1311 at 1511.762 kb on - strand, within Echvi_1311 at 1511.765 kb on + strand, within Echvi_1311 at 1511.765 kb on + strand, within Echvi_1311 at 1511.765 kb on + strand, within Echvi_1311 at 1511.766 kb on - strand, within Echvi_1311 at 1511.766 kb on - strand, within Echvi_1311 at 1511.794 kb on + strand, within Echvi_1311 at 1511.794 kb on + strand, within Echvi_1311 at 1511.794 kb on + strand, within Echvi_1311 at 1511.794 kb on + strand, within Echvi_1311 at 1511.795 kb on - strand, within Echvi_1311 at 1511.795 kb on - strand, within Echvi_1311 at 1511.854 kb on + strand, within Echvi_1311 at 1511.855 kb on - strand, within Echvi_1311 at 1511.865 kb on + strand, within Echvi_1311 at 1511.865 kb on + strand, within Echvi_1311 at 1511.929 kb on + strand, within Echvi_1311 at 1511.940 kb on + strand, within Echvi_1311 at 1511.940 kb on + strand, within Echvi_1311 at 1511.940 kb on + strand, within Echvi_1311 at 1511.941 kb on - strand, within Echvi_1311 at 1511.941 kb on - strand, within Echvi_1311 at 1511.944 kb on + strand, within Echvi_1311 at 1511.945 kb on - strand, within Echvi_1311 at 1511.945 kb on - strand, within Echvi_1311 at 1511.945 kb on - strand, within Echvi_1311 at 1511.965 kb on + strand, within Echvi_1311 at 1511.966 kb on - strand, within Echvi_1311 at 1512.012 kb on - strand, within Echvi_1311 at 1512.012 kb on - strand, within Echvi_1311 at 1512.032 kb on - strand, within Echvi_1311 at 1512.034 kb on + strand, within Echvi_1311 at 1512.035 kb on - strand, within Echvi_1311 at 1512.035 kb on - strand, within Echvi_1311 at 1512.035 kb on - strand, within Echvi_1311 at 1512.038 kb on + strand, within Echvi_1311 at 1512.038 kb on + strand, within Echvi_1311 at 1512.038 kb on + strand, within Echvi_1311 at 1512.038 kb on + strand, within Echvi_1311 at 1512.038 kb on + strand, within Echvi_1311 at 1512.039 kb on - strand, within Echvi_1311 at 1512.039 kb on - strand, within Echvi_1311 at 1512.043 kb on + strand, within Echvi_1311 at 1512.043 kb on + strand, within Echvi_1311 at 1512.043 kb on + strand, within Echvi_1311 at 1512.044 kb on - strand, within Echvi_1311 at 1512.055 kb on + strand, within Echvi_1311 at 1512.056 kb on - strand, within Echvi_1311 at 1512.056 kb on - strand, within Echvi_1311 at 1512.103 kb on - strand, within Echvi_1311 at 1512.166 kb on - strand, within Echvi_1311 at 1512.166 kb on - strand, within Echvi_1311 at 1512.184 kb on + strand, within Echvi_1311 at 1512.184 kb on + strand, within Echvi_1311 at 1512.258 kb on + strand, within Echvi_1311 at 1512.279 kb on - strand, within Echvi_1311 at 1512.281 kb on - strand, within Echvi_1311 at 1512.281 kb on - strand, within Echvi_1311 at 1512.286 kb on - strand, within Echvi_1311 at 1512.313 kb on - strand, within Echvi_1311 at 1512.419 kb on + strand at 1512.420 kb on - strand at 1512.420 kb on - strand at 1512.488 kb on + strand at 1512.488 kb on + strand at 1512.488 kb on + strand at 1512.488 kb on + strand at 1512.488 kb on + strand at 1512.489 kb on - strand at 1512.489 kb on - strand at 1512.546 kb on + strand at 1512.547 kb on - strand at 1512.553 kb on - strand at 1512.555 kb on + strand at 1512.555 kb on + strand at 1512.555 kb on + strand at 1512.556 kb on - strand at 1512.557 kb on + strand at 1512.557 kb on + strand at 1512.557 kb on + strand at 1512.558 kb on - strand at 1512.558 kb on - strand at 1512.559 kb on + strand at 1512.559 kb on + strand at 1512.559 kb on + strand at 1512.560 kb on - strand at 1512.560 kb on - strand at 1512.566 kb on + strand at 1512.574 kb on + strand at 1512.574 kb on + strand at 1512.574 kb on + strand at 1512.574 kb on + strand at 1512.574 kb on + strand at 1512.574 kb on + strand at 1512.574 kb on + strand at 1512.574 kb on + strand at 1512.576 kb on + strand at 1512.576 kb on + strand at 1512.576 kb on + strand at 1512.576 kb on + strand at 1512.576 kb on + strand at 1512.576 kb on + strand at 1512.576 kb on + strand at 1512.576 kb on + strand at 1512.576 kb on + strand at 1512.577 kb on - strand at 1512.582 kb on + strand at 1512.593 kb on + strand at 1512.618 kb on + strand at 1512.618 kb on + strand at 1512.618 kb on + strand at 1512.618 kb on + strand at 1512.618 kb on + strand at 1512.618 kb on + strand at 1512.618 kb on + strand at 1512.619 kb on - strand at 1512.627 kb on + strand at 1512.642 kb on + strand at 1512.673 kb on + strand at 1512.732 kb on + strand at 1512.735 kb on + strand at 1512.765 kb on + strand at 1512.817 kb on - strand at 1513.014 kb on + strand at 1513.035 kb on + strand, within Echvi_1312 at 1513.043 kb on - strand, within Echvi_1312 at 1513.060 kb on + strand, within Echvi_1312 at 1513.086 kb on - strand, within Echvi_1312 at 1513.135 kb on + strand, within Echvi_1312 at 1513.135 kb on + strand, within Echvi_1312 at 1513.222 kb on + strand, within Echvi_1312 at 1513.232 kb on + strand, within Echvi_1312 at 1513.232 kb on + strand, within Echvi_1312 at 1513.257 kb on + strand, within Echvi_1312 at 1513.322 kb on - strand, within Echvi_1312 at 1513.326 kb on + strand, within Echvi_1312 at 1513.418 kb on + strand, within Echvi_1312 at 1513.419 kb on - strand, within Echvi_1312 at 1513.419 kb on - strand, within Echvi_1312 at 1513.434 kb on + strand, within Echvi_1312
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Zinc 0.5 mM remove 1,510,322 + Echvi_1310 0.67 -0.9 1,510,323 - Echvi_1310 0.67 -0.1 1,510,323 - Echvi_1310 0.67 -0.1 1,510,383 + Echvi_1310 0.69 +0.4 1,510,384 - Echvi_1310 0.69 +0.7 1,510,427 + Echvi_1310 0.71 -0.4 1,510,428 - Echvi_1310 0.71 -0.8 1,510,436 - Echvi_1310 0.72 +0.5 1,510,436 - Echvi_1310 0.72 +0.4 1,510,436 - Echvi_1310 0.72 -0.5 1,510,448 + Echvi_1310 0.72 -0.1 1,510,510 + Echvi_1310 0.75 +0.2 1,510,510 + Echvi_1310 0.75 -0.3 1,510,510 + Echvi_1310 0.75 -0.3 1,510,606 - Echvi_1310 0.79 -0.0 1,510,674 + Echvi_1310 0.81 +0.6 1,510,675 - Echvi_1310 0.81 -1.5 1,510,675 - Echvi_1310 0.81 -0.1 1,510,691 - Echvi_1310 0.82 +1.3 1,510,724 + Echvi_1310 0.83 -0.6 1,510,724 + Echvi_1310 0.83 -0.6 1,510,724 + Echvi_1310 0.83 -0.0 1,510,724 + Echvi_1310 0.83 +0.6 1,510,725 - Echvi_1310 0.83 +3.9 1,510,808 - Echvi_1310 0.87 +0.3 1,510,830 + Echvi_1310 0.88 +1.5 1,510,832 + Echvi_1310 0.88 -2.5 1,510,879 - Echvi_1310 0.90 -1.1 1,510,891 + -0.9 1,510,907 - +0.5 1,510,925 + -0.0 1,510,988 - +0.4 1,511,087 - -0.3 1,511,096 + -0.5 1,511,097 - +1.8 1,511,127 + -0.1 1,511,127 + +0.2 1,511,128 - +1.0 1,511,167 + +0.1 1,511,177 - -0.0 1,511,180 - -1.5 1,511,180 - -0.6 1,511,196 - -0.4 1,511,196 - -0.6 1,511,287 + +1.4 1,511,287 + +0.3 1,511,287 + +1.9 1,511,287 + -0.1 1,511,287 + -0.5 1,511,287 + -0.6 1,511,287 + +1.2 1,511,288 - +0.5 1,511,342 + -1.7 1,511,372 + -0.2 1,511,372 + +0.7 1,511,373 - +0.4 1,511,373 - +0.1 1,511,394 + +0.2 1,511,395 - +0.5 1,511,395 - -0.4 1,511,395 - -1.4 1,511,408 + -0.2 1,511,408 + -1.0 1,511,408 + +0.7 1,511,409 - Echvi_1311 0.10 -0.2 1,511,409 - Echvi_1311 0.10 -0.8 1,511,417 + Echvi_1311 0.11 +0.7 1,511,418 - Echvi_1311 0.11 +0.7 1,511,419 + Echvi_1311 0.11 +0.4 1,511,419 + Echvi_1311 0.11 -0.0 1,511,429 - Echvi_1311 0.12 +1.0 1,511,432 + Echvi_1311 0.12 -0.0 1,511,432 + Echvi_1311 0.12 +0.9 1,511,433 - Echvi_1311 0.12 +0.6 1,511,433 - Echvi_1311 0.12 +0.3 1,511,433 - Echvi_1311 0.12 +1.0 1,511,533 + Echvi_1311 0.20 -0.0 1,511,535 + Echvi_1311 0.20 +0.2 1,511,535 + Echvi_1311 0.20 +1.3 1,511,535 + Echvi_1311 0.20 +0.8 1,511,535 + Echvi_1311 0.20 +0.4 1,511,535 + Echvi_1311 0.20 -0.4 1,511,535 + Echvi_1311 0.20 -0.4 1,511,535 + Echvi_1311 0.20 -0.1 1,511,535 + Echvi_1311 0.20 +0.7 1,511,536 - Echvi_1311 0.20 -0.7 1,511,536 - Echvi_1311 0.20 +1.4 1,511,536 - Echvi_1311 0.20 +1.1 1,511,544 + Echvi_1311 0.21 +0.8 1,511,575 + Echvi_1311 0.23 +0.2 1,511,605 + Echvi_1311 0.26 -0.2 1,511,605 + Echvi_1311 0.26 +0.7 1,511,606 - Echvi_1311 0.26 -0.2 1,511,662 + Echvi_1311 0.31 -0.5 1,511,663 - Echvi_1311 0.31 -0.3 1,511,682 - Echvi_1311 0.32 +0.2 1,511,762 - Echvi_1311 0.39 +0.0 1,511,765 + Echvi_1311 0.39 +0.1 1,511,765 + Echvi_1311 0.39 +0.3 1,511,765 + Echvi_1311 0.39 -1.9 1,511,766 - Echvi_1311 0.39 +0.8 1,511,766 - Echvi_1311 0.39 +0.3 1,511,794 + Echvi_1311 0.41 +0.7 1,511,794 + Echvi_1311 0.41 +0.1 1,511,794 + Echvi_1311 0.41 +0.1 1,511,794 + Echvi_1311 0.41 +0.8 1,511,795 - Echvi_1311 0.41 +1.5 1,511,795 - Echvi_1311 0.41 -1.3 1,511,854 + Echvi_1311 0.46 +0.5 1,511,855 - Echvi_1311 0.46 -0.5 1,511,865 + Echvi_1311 0.47 +0.7 1,511,865 + Echvi_1311 0.47 +0.6 1,511,929 + Echvi_1311 0.52 +0.7 1,511,940 + Echvi_1311 0.53 +0.5 1,511,940 + Echvi_1311 0.53 +0.8 1,511,940 + Echvi_1311 0.53 +0.1 1,511,941 - Echvi_1311 0.53 +0.1 1,511,941 - Echvi_1311 0.53 +0.4 1,511,944 + Echvi_1311 0.53 -0.0 1,511,945 - Echvi_1311 0.54 +0.3 1,511,945 - Echvi_1311 0.54 +0.6 1,511,945 - Echvi_1311 0.54 +0.1 1,511,965 + Echvi_1311 0.55 +0.1 1,511,966 - Echvi_1311 0.55 +0.6 1,512,012 - Echvi_1311 0.59 +3.2 1,512,012 - Echvi_1311 0.59 +0.3 1,512,032 - Echvi_1311 0.61 +0.6 1,512,034 + Echvi_1311 0.61 +0.9 1,512,035 - Echvi_1311 0.61 +0.3 1,512,035 - Echvi_1311 0.61 +0.6 1,512,035 - Echvi_1311 0.61 +0.4 1,512,038 + Echvi_1311 0.61 -0.1 1,512,038 + Echvi_1311 0.61 -0.0 1,512,038 + Echvi_1311 0.61 +0.0 1,512,038 + Echvi_1311 0.61 +0.3 1,512,038 + Echvi_1311 0.61 -0.1 1,512,039 - Echvi_1311 0.61 -0.5 1,512,039 - Echvi_1311 0.61 +0.8 1,512,043 + Echvi_1311 0.62 +0.2 1,512,043 + Echvi_1311 0.62 -0.7 1,512,043 + Echvi_1311 0.62 +0.3 1,512,044 - Echvi_1311 0.62 -1.6 1,512,055 + Echvi_1311 0.63 +0.0 1,512,056 - Echvi_1311 0.63 +0.3 1,512,056 - Echvi_1311 0.63 -0.7 1,512,103 - Echvi_1311 0.66 +0.2 1,512,166 - Echvi_1311 0.72 +0.4 1,512,166 - Echvi_1311 0.72 +0.6 1,512,184 + Echvi_1311 0.73 -0.0 1,512,184 + Echvi_1311 0.73 +0.6 1,512,258 + Echvi_1311 0.79 -0.0 1,512,279 - Echvi_1311 0.81 +0.1 1,512,281 - Echvi_1311 0.81 +0.4 1,512,281 - Echvi_1311 0.81 +0.4 1,512,286 - Echvi_1311 0.81 +0.1 1,512,313 - Echvi_1311 0.83 +0.3 1,512,419 + +0.7 1,512,420 - -0.5 1,512,420 - -0.4 1,512,488 + +0.4 1,512,488 + +0.5 1,512,488 + -0.0 1,512,488 + +0.6 1,512,488 + +0.6 1,512,489 - -0.6 1,512,489 - +0.4 1,512,546 + +0.3 1,512,547 - +1.6 1,512,553 - +0.3 1,512,555 + +0.2 1,512,555 + -0.0 1,512,555 + +0.2 1,512,556 - -0.0 1,512,557 + +0.2 1,512,557 + +0.6 1,512,557 + +0.4 1,512,558 - -0.1 1,512,558 - -0.5 1,512,559 + -0.7 1,512,559 + +0.2 1,512,559 + +0.5 1,512,560 - +0.1 1,512,560 - +0.7 1,512,566 + +1.0 1,512,574 + +0.3 1,512,574 + +0.2 1,512,574 + +0.2 1,512,574 + +0.1 1,512,574 + +0.2 1,512,574 + +0.7 1,512,574 + -0.4 1,512,574 + +0.3 1,512,576 + +0.2 1,512,576 + -0.4 1,512,576 + +0.2 1,512,576 + +0.1 1,512,576 + +0.3 1,512,576 + +0.8 1,512,576 + +0.1 1,512,576 + +0.1 1,512,576 + +0.1 1,512,577 - -0.5 1,512,582 + -0.9 1,512,593 + -0.6 1,512,618 + +0.5 1,512,618 + +0.5 1,512,618 + -0.2 1,512,618 + +0.6 1,512,618 + +1.6 1,512,618 + -1.3 1,512,618 + -1.3 1,512,619 - +0.5 1,512,627 + +0.7 1,512,642 + -0.2 1,512,673 + +3.6 1,512,732 + +0.2 1,512,735 + -0.8 1,512,765 + -0.3 1,512,817 - -0.7 1,513,014 + -0.2 1,513,035 + Echvi_1312 0.10 -0.3 1,513,043 - Echvi_1312 0.11 +0.6 1,513,060 + Echvi_1312 0.11 +0.1 1,513,086 - Echvi_1312 0.12 -0.7 1,513,135 + Echvi_1312 0.13 +0.3 1,513,135 + Echvi_1312 0.13 -0.1 1,513,222 + Echvi_1312 0.16 +1.0 1,513,232 + Echvi_1312 0.16 +0.1 1,513,232 + Echvi_1312 0.16 -0.7 1,513,257 + Echvi_1312 0.17 +0.5 1,513,322 - Echvi_1312 0.19 -0.2 1,513,326 + Echvi_1312 0.19 +0.8 1,513,418 + Echvi_1312 0.22 +0.1 1,513,419 - Echvi_1312 0.22 -1.4 1,513,419 - Echvi_1312 0.22 +0.4 1,513,434 + Echvi_1312 0.22 +0.6
Or see this region's nucleotide sequence