Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0648

Experiment: m.b. Zinc 0.5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEchvi_0647 and Echvi_0648 are separated by 476 nucleotidesEchvi_0648 and Echvi_0649 are separated by 326 nucleotides Echvi_0647: Echvi_0647 - ferrochelatase, at 730,674 to 731,717 _0647 Echvi_0648: Echvi_0648 - hypothetical protein, at 732,194 to 732,700 _0648 Echvi_0649: Echvi_0649 - Transposase and inactivated derivatives, at 733,027 to 734,085 _0649 Position (kb) 732 733Strain fitness (log2 ratio) -2 -1 0 1 2at 731.723 kb on - strandat 731.734 kb on - strandat 731.742 kb on - strandat 731.743 kb on + strandat 731.743 kb on + strandat 731.797 kb on - strandat 731.797 kb on - strandat 731.797 kb on - strandat 731.836 kb on + strandat 731.843 kb on + strandat 731.857 kb on - strandat 731.866 kb on + strandat 731.902 kb on + strandat 731.903 kb on - strandat 731.903 kb on - strandat 731.903 kb on - strandat 731.903 kb on - strandat 731.909 kb on - strandat 731.909 kb on - strandat 731.946 kb on + strandat 731.946 kb on + strandat 731.947 kb on - strandat 731.955 kb on - strandat 731.967 kb on + strandat 731.968 kb on - strandat 732.014 kb on + strandat 732.085 kb on + strandat 732.096 kb on + strandat 732.097 kb on - strandat 732.116 kb on + strandat 732.163 kb on - strandat 732.163 kb on - strandat 732.170 kb on + strandat 732.171 kb on - strandat 732.187 kb on + strandat 732.259 kb on + strand, within Echvi_0648at 732.261 kb on + strand, within Echvi_0648at 732.261 kb on + strand, within Echvi_0648at 732.262 kb on - strand, within Echvi_0648at 732.262 kb on - strand, within Echvi_0648at 732.262 kb on - strand, within Echvi_0648at 732.262 kb on - strand, within Echvi_0648at 732.296 kb on + strand, within Echvi_0648at 732.296 kb on + strand, within Echvi_0648at 732.296 kb on + strand, within Echvi_0648at 732.297 kb on - strand, within Echvi_0648at 732.297 kb on - strand, within Echvi_0648at 732.297 kb on - strand, within Echvi_0648at 732.336 kb on - strand, within Echvi_0648at 732.373 kb on + strand, within Echvi_0648at 732.648 kb on - strand, within Echvi_0648at 732.665 kb on + strandat 732.666 kb on - strandat 732.672 kb on - strandat 732.695 kb on - strandat 732.700 kb on + strandat 732.700 kb on + strandat 732.701 kb on - strandat 732.722 kb on - strandat 732.806 kb on + strandat 732.806 kb on + strandat 732.861 kb on + strandat 732.878 kb on + strandat 732.878 kb on + strandat 732.985 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Zinc 0.5 mM
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731,723 - -1.7
731,734 - +0.2
731,742 - +0.4
731,743 + +0.6
731,743 + +1.2
731,797 - +1.5
731,797 - -0.7
731,797 - +1.2
731,836 + +0.3
731,843 + -0.2
731,857 - -0.6
731,866 + -1.1
731,902 + +0.3
731,903 - -1.8
731,903 - -1.0
731,903 - -0.6
731,903 - -0.2
731,909 - -0.3
731,909 - -0.6
731,946 + -0.2
731,946 + +0.1
731,947 - +0.0
731,955 - -1.8
731,967 + +0.2
731,968 - -1.6
732,014 + +0.5
732,085 + +0.1
732,096 + +0.2
732,097 - -0.1
732,116 + -0.0
732,163 - +0.5
732,163 - +2.0
732,170 + +0.1
732,171 - -0.9
732,187 + +1.1
732,259 + Echvi_0648 0.13 +0.8
732,261 + Echvi_0648 0.13 +0.0
732,261 + Echvi_0648 0.13 +0.9
732,262 - Echvi_0648 0.13 -0.9
732,262 - Echvi_0648 0.13 -0.3
732,262 - Echvi_0648 0.13 +0.4
732,262 - Echvi_0648 0.13 +0.3
732,296 + Echvi_0648 0.20 -2.5
732,296 + Echvi_0648 0.20 +1.0
732,296 + Echvi_0648 0.20 +0.6
732,297 - Echvi_0648 0.20 -0.4
732,297 - Echvi_0648 0.20 +1.3
732,297 - Echvi_0648 0.20 +0.1
732,336 - Echvi_0648 0.28 +0.8
732,373 + Echvi_0648 0.35 -0.0
732,648 - Echvi_0648 0.90 -1.0
732,665 + +0.2
732,666 - -0.1
732,672 - +0.7
732,695 - -1.1
732,700 + +0.6
732,700 + +0.4
732,701 - +0.5
732,722 - +0.2
732,806 + +0.2
732,806 + -0.5
732,861 + +0.3
732,878 + +0.0
732,878 + -0.8
732,985 - -0.7

Or see this region's nucleotide sequence