Strain Fitness in Magnetospirillum magneticum AMB-1 around AMB_RS11775

Experiment: 150_nonmag_3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	150_nonmag_3
2,532,084	+		AMB_RS11770	0.41	-0.3
2,532,084	+		AMB_RS11770	0.41	+2.1
2,532,443	-		AMB_RS11770	0.88	-0.1
2,532,617	-				-1.9
2,532,695	+				-1.0
2,532,696	-				-0.7
2,532,719	-				-1.5
2,532,819	-				+0.1
2,532,901	+				-0.5
2,532,901	+				-0.3
2,532,902	-				-1.8
2,532,902	-				-1.1
2,532,902	-				-2.7
2,532,902	-				-1.3
2,532,902	-				-0.8
2,532,902	-				-0.7
2,532,902	-				-1.2
2,532,902	-				-0.2
2,532,902	-				+0.3
2,532,902	-				-1.8
2,532,929	+				-1.5
2,532,930	-				-1.8
2,532,930	-				+0.0
2,533,011	-				+0.4
2,533,011	-				-1.6
2,533,011	-				-0.5
2,533,011	-				+0.6
2,533,011	-				-2.1
2,533,011	-				+0.1
2,533,011	-				-0.5
2,533,011	-				+0.3
2,533,011	-				-1.8
2,533,011	-				-0.9
2,533,011	-				-0.2
2,533,011	-				-2.3
2,533,011	-				-2.8
2,533,011	-				-4.1
2,533,011	-				-2.7
2,533,011	-				+0.6
2,533,062	-				-0.2
2,533,103	+				-1.0
2,533,103	+				-0.2
2,533,103	+				-0.4
2,533,103	+				-0.8
2,533,103	+				+0.1
2,533,104	-				-0.9
2,533,104	-				-0.7
2,533,104	-				-0.6
2,533,104	-				-1.5
2,533,278	+				+0.7
2,533,343	+				-1.1
2,533,344	-				-1.3
2,533,344	-				-0.4
2,533,344	-				+0.5
2,533,634	+		AMB_RS11775	0.12	+0.7
2,533,634	+		AMB_RS11775	0.12	+0.5
2,533,634	+		AMB_RS11775	0.12	-0.5
2,533,634	+		AMB_RS11775	0.12	-0.4
2,533,634	+		AMB_RS11775	0.12	-0.1
2,533,635	-		AMB_RS11775	0.12	-3.9
2,533,635	-		AMB_RS11775	0.12	-2.0
2,533,635	-		AMB_RS11775	0.12	-0.8
2,533,635	-		AMB_RS11775	0.12	-0.6
2,533,635	-		AMB_RS11775	0.12	-1.0
2,533,635	-		AMB_RS11775	0.12	-0.0
2,533,635	-		AMB_RS11775	0.12	-1.3
2,533,635	-		AMB_RS11775	0.12	+1.3
2,533,635	-		AMB_RS11775	0.12	-2.1
2,533,635	-		AMB_RS11775	0.12	+0.1
2,533,635	-		AMB_RS11775	0.12	+0.2
2,533,635	-		AMB_RS11775	0.12	-0.5
2,533,635	-		AMB_RS11775	0.12	-1.5
2,533,635	-		AMB_RS11775	0.12	+0.5
2,533,635	-		AMB_RS11775	0.12	-0.7
2,533,667	+		AMB_RS11775	0.13	-3.6
2,533,667	+		AMB_RS11775	0.13	-1.2
2,533,667	+		AMB_RS11775	0.13	-1.0
2,533,667	+		AMB_RS11775	0.13	-0.8
2,533,667	+		AMB_RS11775	0.13	+0.5
2,533,667	+		AMB_RS11775	0.13	-0.7
2,533,667	+		AMB_RS11775	0.13	+0.3
2,533,667	+		AMB_RS11775	0.13	-0.4
2,533,668	-		AMB_RS11775	0.13	+0.1
2,533,668	-		AMB_RS11775	0.13	-1.9
2,533,668	-		AMB_RS11775	0.13	-1.1
2,533,668	-		AMB_RS11775	0.13	-0.0
2,533,668	-		AMB_RS11775	0.13	+1.0
2,533,668	-		AMB_RS11775	0.13	-1.0
2,533,706	+		AMB_RS11775	0.14	-3.3
2,533,707	-		AMB_RS11775	0.14	-0.3
2,533,707	-		AMB_RS11775	0.14	-1.1
2,533,707	-		AMB_RS11775	0.14	-0.2
2,533,707	-		AMB_RS11775	0.14	-2.8
2,533,707	-		AMB_RS11775	0.14	-1.7
2,533,707	-		AMB_RS11775	0.14	-1.6
2,533,837	+		AMB_RS11775	0.17	-0.4
2,533,837	+		AMB_RS11775	0.17	-1.2
2,533,838	-		AMB_RS11775	0.17	-2.7
2,533,838	-		AMB_RS11775	0.17	+0.2
2,534,081	+		AMB_RS11775	0.22	+1.5
2,534,081	+		AMB_RS11775	0.22	+0.6
2,534,081	+		AMB_RS11775	0.22	-1.1
2,534,081	+		AMB_RS11775	0.22	-3.2
2,534,082	-		AMB_RS11775	0.22	-1.2
2,534,082	-		AMB_RS11775	0.22	-1.3
2,534,082	-		AMB_RS11775	0.22	-1.0
2,534,082	-		AMB_RS11775	0.22	-0.6
2,534,087	+		AMB_RS11775	0.22	-1.5
2,534,088	-		AMB_RS11775	0.22	-0.3
2,534,088	-		AMB_RS11775	0.22	-1.0
2,534,088	-		AMB_RS11775	0.22	-0.4
2,534,195	+		AMB_RS11775	0.24	-0.5
2,534,196	-		AMB_RS11775	0.24	+0.8
2,534,196	-		AMB_RS11775	0.24	-1.4
2,534,377	+		AMB_RS11775	0.28	+0.1
2,534,377	+		AMB_RS11775	0.28	-1.0
2,534,377	+		AMB_RS11775	0.28	+0.5
2,534,377	+		AMB_RS11775	0.28	-1.8
2,534,378	-		AMB_RS11775	0.28	-0.5
2,534,488	+		AMB_RS11775	0.31	+0.7
2,534,488	+		AMB_RS11775	0.31	+3.5
2,534,488	+		AMB_RS11775	0.31	-0.9
2,534,489	-		AMB_RS11775	0.31	-0.5
2,534,568	+		AMB_RS11775	0.32	-1.2
2,534,614	+		AMB_RS11775	0.33	-0.1
2,534,614	+		AMB_RS11775	0.33	-1.8
2,534,614	+		AMB_RS11775	0.33	-1.5
2,534,615	-		AMB_RS11775	0.33	-1.4
2,534,615	-		AMB_RS11775	0.33	-0.4
2,534,615	-		AMB_RS11775	0.33	+0.5
2,534,944	+		AMB_RS11775	0.40	-0.1
2,534,944	+		AMB_RS11775	0.40	-0.1
2,534,944	+		AMB_RS11775	0.40	-0.8
2,534,945	-		AMB_RS11775	0.40	-0.4
2,534,945	-		AMB_RS11775	0.40	-1.0
2,534,945	-		AMB_RS11775	0.40	-2.7
2,534,945	-		AMB_RS11775	0.40	-0.2
2,534,945	-		AMB_RS11775	0.40	-0.5
2,535,148	+		AMB_RS11775	0.45	-0.3
2,535,148	+		AMB_RS11775	0.45	-2.7
2,535,208	+		AMB_RS11775	0.46	-0.4
2,535,208	+		AMB_RS11775	0.46	-2.8
2,535,208	+		AMB_RS11775	0.46	-0.6
2,535,208	+		AMB_RS11775	0.46	-1.9
2,535,208	+		AMB_RS11775	0.46	-0.8
2,535,209	-		AMB_RS11775	0.46	-1.7
2,535,209	-		AMB_RS11775	0.46	-1.0
2,535,209	-		AMB_RS11775	0.46	-1.2
2,535,209	-		AMB_RS11775	0.46	-2.1
2,535,209	-		AMB_RS11775	0.46	+1.5
2,535,209	-		AMB_RS11775	0.46	+0.0
2,535,226	+		AMB_RS11775	0.47	+1.9
2,535,226	+		AMB_RS11775	0.47	+1.5
2,535,227	-		AMB_RS11775	0.47	-0.5
2,535,227	-		AMB_RS11775	0.47	-2.1
2,535,286	+		AMB_RS11775	0.48	+1.6
2,535,286	+		AMB_RS11775	0.48	-2.3
2,535,286	+		AMB_RS11775	0.48	-0.9
2,535,286	+		AMB_RS11775	0.48	-1.5
2,535,286	+		AMB_RS11775	0.48	-1.0
2,535,287	-		AMB_RS11775	0.48	-1.1
2,535,287	-		AMB_RS11775	0.48	+0.5
2,535,287	-		AMB_RS11775	0.48	-0.6
2,535,296	-		AMB_RS11775	0.48	-1.2
2,535,352	+		AMB_RS11775	0.49	-3.1
2,535,352	+		AMB_RS11775	0.49	-0.8
2,535,352	+		AMB_RS11775	0.49	-2.3
2,535,352	+		AMB_RS11775	0.49	+0.8
2,535,353	-		AMB_RS11775	0.49	-0.2
2,535,353	-		AMB_RS11775	0.49	+0.5
2,535,353	-		AMB_RS11775	0.49	-1.8
2,535,436	+		AMB_RS11775	0.51	-3.6
2,535,436	+		AMB_RS11775	0.51	-1.3
2,535,437	-		AMB_RS11775	0.51	-1.1
2,535,437	-		AMB_RS11775	0.51	-0.5
2,535,454	+		AMB_RS11775	0.51	-0.8
2,535,455	-		AMB_RS11775	0.52	+0.3
2,535,455	-		AMB_RS11775	0.52	-1.2
2,535,484	+		AMB_RS11775	0.52	-0.9
2,535,484	+		AMB_RS11775	0.52	+0.5
2,535,484	+		AMB_RS11775	0.52	-0.6
2,535,484	+		AMB_RS11775	0.52	-1.3
2,535,748	+		AMB_RS11775	0.58	-0.7
2,535,749	-		AMB_RS11775	0.58	-0.9
2,535,749	-		AMB_RS11775	0.58	-2.1
2,535,749	-		AMB_RS11775	0.58	-1.2
2,535,749	-		AMB_RS11775	0.58	-2.7
2,535,839	+		AMB_RS11775	0.60	+1.5
2,535,839	+		AMB_RS11775	0.60	+0.0
2,535,840	-		AMB_RS11775	0.60	-1.4
2,535,916	+		AMB_RS11775	0.61	+1.7
2,535,916	+		AMB_RS11775	0.61	-2.7
2,535,916	+		AMB_RS11775	0.61	-0.4
2,535,917	-		AMB_RS11775	0.61	-4.0
2,535,917	-		AMB_RS11775	0.61	-1.0
2,535,917	-		AMB_RS11775	0.61	+0.5
2,536,078	+		AMB_RS11775	0.65	-1.3
2,536,078	+		AMB_RS11775	0.65	-1.4
2,536,078	+		AMB_RS11775	0.65	-1.4
2,536,078	+		AMB_RS11775	0.65	-1.1
2,536,078	+		AMB_RS11775	0.65	-1.5
2,536,078	+		AMB_RS11775	0.65	-0.3
2,536,079	-		AMB_RS11775	0.65	+0.1
2,536,079	-		AMB_RS11775	0.65	-0.5
2,536,079	-		AMB_RS11775	0.65	+0.5
2,536,079	-		AMB_RS11775	0.65	-0.7
2,536,079	-		AMB_RS11775	0.65	-0.5
2,536,079	-		AMB_RS11775	0.65	-2.2
2,536,079	-		AMB_RS11775	0.65	-1.1
2,536,079	-		AMB_RS11775	0.65	-1.6
2,536,079	-		AMB_RS11775	0.65	-1.6
2,536,079	-		AMB_RS11775	0.65	+0.5
2,536,079	-		AMB_RS11775	0.65	-3.7
2,536,079	-		AMB_RS11775	0.65	-1.7
2,536,140	+		AMB_RS11775	0.66	-2.1
2,536,140	+		AMB_RS11775	0.66	-0.1
2,536,141	-		AMB_RS11775	0.66	-0.7
2,536,141	-		AMB_RS11775	0.66	-0.4
2,536,141	-		AMB_RS11775	0.66	-0.6
2,536,347	+		AMB_RS11775	0.71	-0.9
2,536,567	+		AMB_RS11775	0.76	-0.8
2,536,567	+		AMB_RS11775	0.76	-1.8
2,536,567	+		AMB_RS11775	0.76	-0.3
2,536,567	+		AMB_RS11775	0.76	+0.1
2,536,567	+		AMB_RS11775	0.76	-0.7
2,536,567	+		AMB_RS11775	0.76	-1.2
2,536,567	+		AMB_RS11775	0.76	-1.3
2,536,568	-		AMB_RS11775	0.76	-3.7
2,536,568	-		AMB_RS11775	0.76	-0.1
2,536,568	-		AMB_RS11775	0.76	-2.5
2,536,568	-		AMB_RS11775	0.76	-0.7
2,536,568	-		AMB_RS11775	0.76	+0.7
2,536,568	-		AMB_RS11775	0.76	-0.6
2,536,568	-		AMB_RS11775	0.76	-1.5
2,536,568	-		AMB_RS11775	0.76	-1.7
2,537,044	+		AMB_RS11775	0.86	+0.1
2,537,044	+		AMB_RS11775	0.86	+0.8
2,537,044	+		AMB_RS11775	0.86	-0.8
2,537,044	+		AMB_RS11775	0.86	-1.1
2,537,044	+		AMB_RS11775	0.86	-0.9
2,537,045	-		AMB_RS11775	0.86	+0.0
2,537,045	-		AMB_RS11775	0.86	-1.5
2,537,045	-		AMB_RS11775	0.86	+0.6
2,537,045	-		AMB_RS11775	0.86	-0.6
2,537,045	-		AMB_RS11775	0.86	-0.5
2,537,045	-		AMB_RS11775	0.86	-0.4
2,537,045	-		AMB_RS11775	0.86	-0.5
2,537,083	+		AMB_RS11775	0.87	-2.5
2,537,083	+		AMB_RS11775	0.87	-1.6
2,537,083	+		AMB_RS11775	0.87	-0.9
2,537,084	-		AMB_RS11775	0.87	-2.1
2,537,084	-		AMB_RS11775	0.87	-1.1
2,537,084	-		AMB_RS11775	0.87	+0.5
2,537,137	-		AMB_RS11775	0.88	-1.3
2,537,137	-		AMB_RS11775	0.88	-2.5
2,537,137	-		AMB_RS11775	0.88	-0.5
2,537,146	+		AMB_RS11775	0.88	+0.7
2,537,146	+		AMB_RS11775	0.88	-1.7
2,537,146	+		AMB_RS11775	0.88	+0.3
2,537,146	+		AMB_RS11775	0.88	-3.0
2,537,170	+		AMB_RS11775	0.89	-0.8
2,537,170	+		AMB_RS11775	0.89	-1.3
2,537,170	+		AMB_RS11775	0.89	-0.6
2,537,170	+		AMB_RS11775	0.89	-0.5
2,537,171	+		AMB_RS11775	0.89	-1.5
2,537,171	-		AMB_RS11775	0.89	-0.9
2,537,171	-		AMB_RS11775	0.89	-1.3
2,537,171	-		AMB_RS11775	0.89	-1.2
2,537,171	-		AMB_RS11775	0.89	-1.0
2,537,260	+				+0.6
2,537,260	+				-1.4
2,537,260	+				+0.0
2,537,260	+				-1.5
2,537,260	+				-1.0
2,537,260	+				-1.1
2,537,260	+				-0.3
2,537,260	+				-1.3
2,537,260	+				+0.9
2,537,261	-				+0.9
2,537,261	-				-0.9
2,537,261	-				+0.9
2,537,261	-				+1.7
2,537,261	-				-0.2
2,537,338	+				-2.2
2,537,338	+				-2.2
2,537,338	+				-0.8
2,537,338	+				-2.3
2,537,338	+				+0.3
2,537,338	+				-2.3
2,537,338	+				+0.9
2,537,338	+				-0.7
2,537,338	+				-0.2
2,537,339	-				-0.7
2,537,339	-				-1.7
2,537,339	-				+0.1
2,537,339	-				-2.3
2,537,385	+				-0.8
2,537,386	-				+0.9
2,537,386	-				+0.1
2,537,386	-				-2.5
2,537,386	-				-0.4
2,537,386	-				+0.3
2,537,545	+				-1.5
2,537,545	+				-0.1
2,537,546	-				+0.0
2,537,546	-				-1.2
2,537,546	-				-0.7
2,537,546	-				-1.8
2,537,546	-				-2.1
2,537,546	-				-0.5
2,537,546	-				+1.8
2,537,590	+				-0.8
2,537,590	+				-2.1
2,537,590	+				-0.9
2,537,590	+				-0.7
2,537,593	+				+0.5
2,537,593	+				-0.9
2,537,593	+				-0.5
2,537,593	+				-0.2
2,537,593	+				-2.0
2,537,593	+				+0.7
2,537,593	+				-0.6
2,537,593	+				-1.0
2,537,593	+				-0.7
2,537,593	+				-0.1
2,537,593	+				-1.1
2,537,593	+				-0.1
2,537,593	+				+2.1
2,537,593	+				-0.4
2,537,593	+				-0.5
2,537,594	-				-0.9
2,537,594	-				-1.2
2,537,594	-				+0.7
2,537,594	-				-2.1
2,537,594	-				-0.7
2,537,594	-				-0.3
2,537,594	-				+0.6
2,537,594	-				-3.6
2,537,594	-				-0.3
2,537,594	-				-2.7
2,537,594	-				-3.3
2,537,594	-				-3.1
2,537,594	-				-0.3
2,537,594	-				-1.0
2,537,594	-				-0.0
2,537,594	-				+1.0
2,537,594	-				-1.8
2,537,594	-				-1.3
2,537,594	-				-3.4
2,537,594	-				-0.7
2,537,629	+				+0.3
2,537,747	+				-3.0
2,537,747	+				-1.0
2,537,777	+				-0.7
2,537,913	-		AMB_RS11780	0.15	-0.8
2,538,337	+		AMB_RS11780	0.45	-0.8
2,538,338	-		AMB_RS11780	0.45	-0.1