Experiment: D-Glucose-6-Phosphate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE41_RS02785 and ABIE41_RS02790 are separated by 107 nucleotides ABIE41_RS02790 and ABIE41_RS02795 overlap by 4 nucleotides ABIE41_RS02795 and ABIE41_RS02800 overlap by 4 nucleotides
ABIE41_RS02785: ABIE41_RS02785 - polysaccharide deacetylase, at 570,972 to 571,871
_RS02785
ABIE41_RS02790: ABIE41_RS02790 - ABC transporter ATP-binding protein, at 571,979 to 573,691
_RS02790
ABIE41_RS02795: ABIE41_RS02795 - ABC transporter permease, at 573,688 to 574,584
_RS02795
ABIE41_RS02800: ABIE41_RS02800 - ABC transporter permease, at 574,581 to 575,555
_RS02800
Position (kb) 571
572
573
574 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 571.090 kb on + strand, within ABIE41_RS02785 at 571.090 kb on + strand, within ABIE41_RS02785 at 571.091 kb on - strand, within ABIE41_RS02785 at 571.091 kb on - strand, within ABIE41_RS02785 at 571.091 kb on - strand, within ABIE41_RS02785 at 571.091 kb on - strand, within ABIE41_RS02785 at 571.091 kb on - strand, within ABIE41_RS02785 at 571.091 kb on - strand, within ABIE41_RS02785 at 571.141 kb on + strand, within ABIE41_RS02785 at 571.141 kb on + strand, within ABIE41_RS02785 at 571.141 kb on + strand, within ABIE41_RS02785 at 571.193 kb on + strand, within ABIE41_RS02785 at 571.195 kb on + strand, within ABIE41_RS02785 at 571.195 kb on + strand, within ABIE41_RS02785 at 571.231 kb on + strand, within ABIE41_RS02785 at 571.307 kb on - strand, within ABIE41_RS02785 at 571.339 kb on + strand, within ABIE41_RS02785 at 571.339 kb on + strand, within ABIE41_RS02785 at 571.339 kb on + strand, within ABIE41_RS02785 at 571.340 kb on - strand, within ABIE41_RS02785 at 571.340 kb on - strand, within ABIE41_RS02785 at 571.340 kb on - strand, within ABIE41_RS02785 at 571.561 kb on + strand, within ABIE41_RS02785 at 571.568 kb on - strand, within ABIE41_RS02785 at 571.663 kb on + strand, within ABIE41_RS02785 at 571.663 kb on + strand, within ABIE41_RS02785 at 571.663 kb on + strand, within ABIE41_RS02785 at 571.833 kb on + strand at 571.980 kb on + strand at 571.981 kb on - strand at 571.981 kb on - strand at 572.025 kb on + strand at 572.026 kb on - strand at 572.026 kb on - strand at 572.026 kb on - strand at 572.026 kb on - strand at 572.046 kb on + strand at 572.046 kb on + strand at 572.046 kb on + strand at 572.047 kb on - strand at 572.376 kb on + strand, within ABIE41_RS02790 at 572.376 kb on + strand, within ABIE41_RS02790 at 572.376 kb on + strand, within ABIE41_RS02790 at 572.376 kb on + strand, within ABIE41_RS02790 at 572.376 kb on + strand, within ABIE41_RS02790 at 572.376 kb on + strand, within ABIE41_RS02790 at 572.376 kb on + strand, within ABIE41_RS02790 at 572.376 kb on + strand, within ABIE41_RS02790 at 572.376 kb on + strand, within ABIE41_RS02790 at 572.376 kb on + strand, within ABIE41_RS02790 at 572.376 kb on + strand, within ABIE41_RS02790 at 572.376 kb on + strand, within ABIE41_RS02790 at 572.377 kb on - strand, within ABIE41_RS02790 at 572.377 kb on - strand, within ABIE41_RS02790 at 572.377 kb on - strand, within ABIE41_RS02790 at 572.377 kb on - strand, within ABIE41_RS02790 at 572.377 kb on - strand, within ABIE41_RS02790 at 572.377 kb on - strand, within ABIE41_RS02790 at 572.577 kb on + strand, within ABIE41_RS02790 at 572.577 kb on + strand, within ABIE41_RS02790 at 572.578 kb on - strand, within ABIE41_RS02790 at 572.578 kb on - strand, within ABIE41_RS02790 at 572.578 kb on - strand, within ABIE41_RS02790 at 572.578 kb on - strand, within ABIE41_RS02790 at 572.578 kb on - strand, within ABIE41_RS02790 at 572.578 kb on - strand, within ABIE41_RS02790 at 572.578 kb on - strand, within ABIE41_RS02790 at 572.578 kb on - strand, within ABIE41_RS02790 at 572.787 kb on + strand, within ABIE41_RS02790 at 572.788 kb on - strand, within ABIE41_RS02790 at 572.788 kb on - strand, within ABIE41_RS02790 at 572.788 kb on - strand, within ABIE41_RS02790 at 572.788 kb on - strand, within ABIE41_RS02790 at 572.788 kb on - strand, within ABIE41_RS02790 at 572.788 kb on - strand, within ABIE41_RS02790 at 572.788 kb on - strand, within ABIE41_RS02790 at 572.928 kb on + strand, within ABIE41_RS02790 at 572.928 kb on + strand, within ABIE41_RS02790 at 572.988 kb on + strand, within ABIE41_RS02790 at 572.989 kb on - strand, within ABIE41_RS02790 at 573.226 kb on - strand, within ABIE41_RS02790 at 573.639 kb on + strand at 573.639 kb on + strand at 573.639 kb on + strand at 573.639 kb on + strand at 573.639 kb on + strand at 573.639 kb on + strand at 573.640 kb on - strand at 573.640 kb on - strand at 573.640 kb on - strand at 573.779 kb on + strand, within ABIE41_RS02795 at 573.780 kb on - strand, within ABIE41_RS02795 at 573.780 kb on - strand, within ABIE41_RS02795 at 573.794 kb on + strand, within ABIE41_RS02795 at 573.812 kb on + strand, within ABIE41_RS02795 at 573.812 kb on + strand, within ABIE41_RS02795 at 573.812 kb on + strand, within ABIE41_RS02795 at 573.813 kb on - strand, within ABIE41_RS02795 at 573.813 kb on - strand, within ABIE41_RS02795 at 573.813 kb on - strand, within ABIE41_RS02795 at 574.019 kb on + strand, within ABIE41_RS02795 at 574.020 kb on - strand, within ABIE41_RS02795 at 574.020 kb on - strand, within ABIE41_RS02795 at 574.071 kb on - strand, within ABIE41_RS02795 at 574.071 kb on - strand, within ABIE41_RS02795 at 574.071 kb on - strand, within ABIE41_RS02795 at 574.071 kb on - strand, within ABIE41_RS02795 at 574.076 kb on + strand, within ABIE41_RS02795 at 574.076 kb on + strand, within ABIE41_RS02795 at 574.076 kb on + strand, within ABIE41_RS02795 at 574.077 kb on - strand, within ABIE41_RS02795 at 574.077 kb on - strand, within ABIE41_RS02795 at 574.077 kb on - strand, within ABIE41_RS02795 at 574.077 kb on - strand, within ABIE41_RS02795 at 574.220 kb on + strand, within ABIE41_RS02795 at 574.221 kb on - strand, within ABIE41_RS02795 at 574.307 kb on + strand, within ABIE41_RS02795 at 574.307 kb on + strand, within ABIE41_RS02795 at 574.308 kb on - strand, within ABIE41_RS02795 at 574.308 kb on - strand, within ABIE41_RS02795 at 574.308 kb on - strand, within ABIE41_RS02795 at 574.365 kb on - strand, within ABIE41_RS02795 at 574.431 kb on - strand, within ABIE41_RS02795 at 574.431 kb on - strand, within ABIE41_RS02795 at 574.432 kb on - strand, within ABIE41_RS02795 at 574.624 kb on + strand at 574.625 kb on - strand at 574.625 kb on - strand at 574.681 kb on + strand, within ABIE41_RS02800 at 574.681 kb on + strand, within ABIE41_RS02800 at 574.681 kb on + strand, within ABIE41_RS02800
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose-6-Phosphate (C) remove 571,090 + ABIE41_RS02785 0.13 -2.2 571,090 + ABIE41_RS02785 0.13 +0.9 571,091 - ABIE41_RS02785 0.13 +1.9 571,091 - ABIE41_RS02785 0.13 +3.6 571,091 - ABIE41_RS02785 0.13 -0.0 571,091 - ABIE41_RS02785 0.13 +3.9 571,091 - ABIE41_RS02785 0.13 -0.8 571,091 - ABIE41_RS02785 0.13 -1.9 571,141 + ABIE41_RS02785 0.19 +0.6 571,141 + ABIE41_RS02785 0.19 +0.7 571,141 + ABIE41_RS02785 0.19 -0.4 571,193 + ABIE41_RS02785 0.25 -0.1 571,195 + ABIE41_RS02785 0.25 +1.0 571,195 + ABIE41_RS02785 0.25 +1.0 571,231 + ABIE41_RS02785 0.29 +1.4 571,307 - ABIE41_RS02785 0.37 -0.1 571,339 + ABIE41_RS02785 0.41 +0.6 571,339 + ABIE41_RS02785 0.41 +0.7 571,339 + ABIE41_RS02785 0.41 +0.4 571,340 - ABIE41_RS02785 0.41 +0.8 571,340 - ABIE41_RS02785 0.41 +0.6 571,340 - ABIE41_RS02785 0.41 +0.8 571,561 + ABIE41_RS02785 0.65 -1.2 571,568 - ABIE41_RS02785 0.66 +0.9 571,663 + ABIE41_RS02785 0.77 +1.3 571,663 + ABIE41_RS02785 0.77 +2.0 571,663 + ABIE41_RS02785 0.77 +0.8 571,833 + +1.4 571,980 + -0.8 571,981 - -0.8 571,981 - +0.3 572,025 + +0.9 572,026 - -0.4 572,026 - +0.9 572,026 - -0.1 572,026 - -0.6 572,046 + -0.6 572,046 + +1.0 572,046 + -0.0 572,047 - -0.8 572,376 + ABIE41_RS02790 0.23 -0.4 572,376 + ABIE41_RS02790 0.23 -1.0 572,376 + ABIE41_RS02790 0.23 +0.6 572,376 + ABIE41_RS02790 0.23 -0.7 572,376 + ABIE41_RS02790 0.23 -1.2 572,376 + ABIE41_RS02790 0.23 -1.4 572,376 + ABIE41_RS02790 0.23 +0.1 572,376 + ABIE41_RS02790 0.23 -0.1 572,376 + ABIE41_RS02790 0.23 +0.2 572,376 + ABIE41_RS02790 0.23 +0.8 572,376 + ABIE41_RS02790 0.23 +0.3 572,376 + ABIE41_RS02790 0.23 +1.1 572,377 - ABIE41_RS02790 0.23 +0.7 572,377 - ABIE41_RS02790 0.23 +3.6 572,377 - ABIE41_RS02790 0.23 -0.0 572,377 - ABIE41_RS02790 0.23 -0.4 572,377 - ABIE41_RS02790 0.23 +0.6 572,377 - ABIE41_RS02790 0.23 -0.0 572,577 + ABIE41_RS02790 0.35 +0.9 572,577 + ABIE41_RS02790 0.35 -1.6 572,578 - ABIE41_RS02790 0.35 +0.8 572,578 - ABIE41_RS02790 0.35 +0.5 572,578 - ABIE41_RS02790 0.35 -1.2 572,578 - ABIE41_RS02790 0.35 +0.3 572,578 - ABIE41_RS02790 0.35 +1.1 572,578 - ABIE41_RS02790 0.35 +1.6 572,578 - ABIE41_RS02790 0.35 +0.0 572,578 - ABIE41_RS02790 0.35 -1.5 572,787 + ABIE41_RS02790 0.47 +1.4 572,788 - ABIE41_RS02790 0.47 +0.2 572,788 - ABIE41_RS02790 0.47 -1.0 572,788 - ABIE41_RS02790 0.47 -1.6 572,788 - ABIE41_RS02790 0.47 +0.6 572,788 - ABIE41_RS02790 0.47 +1.3 572,788 - ABIE41_RS02790 0.47 +1.9 572,788 - ABIE41_RS02790 0.47 +1.3 572,928 + ABIE41_RS02790 0.55 +1.8 572,928 + ABIE41_RS02790 0.55 -1.2 572,988 + ABIE41_RS02790 0.59 -0.4 572,989 - ABIE41_RS02790 0.59 +1.7 573,226 - ABIE41_RS02790 0.73 -0.0 573,639 + -1.4 573,639 + +0.3 573,639 + +1.6 573,639 + +0.3 573,639 + -1.2 573,639 + +0.5 573,640 - +0.5 573,640 - -2.6 573,640 - +0.3 573,779 + ABIE41_RS02795 0.10 +0.2 573,780 - ABIE41_RS02795 0.10 +0.7 573,780 - ABIE41_RS02795 0.10 -0.5 573,794 + ABIE41_RS02795 0.12 +0.6 573,812 + ABIE41_RS02795 0.14 -1.8 573,812 + ABIE41_RS02795 0.14 -1.0 573,812 + ABIE41_RS02795 0.14 +0.6 573,813 - ABIE41_RS02795 0.14 +0.8 573,813 - ABIE41_RS02795 0.14 +1.2 573,813 - ABIE41_RS02795 0.14 +0.1 574,019 + ABIE41_RS02795 0.37 +1.6 574,020 - ABIE41_RS02795 0.37 +0.6 574,020 - ABIE41_RS02795 0.37 -0.7 574,071 - ABIE41_RS02795 0.43 -1.3 574,071 - ABIE41_RS02795 0.43 +1.0 574,071 - ABIE41_RS02795 0.43 -1.1 574,071 - ABIE41_RS02795 0.43 -0.1 574,076 + ABIE41_RS02795 0.43 -0.4 574,076 + ABIE41_RS02795 0.43 -0.0 574,076 + ABIE41_RS02795 0.43 -1.8 574,077 - ABIE41_RS02795 0.43 +1.1 574,077 - ABIE41_RS02795 0.43 -0.2 574,077 - ABIE41_RS02795 0.43 +0.6 574,077 - ABIE41_RS02795 0.43 +1.2 574,220 + ABIE41_RS02795 0.59 -0.1 574,221 - ABIE41_RS02795 0.59 -2.8 574,307 + ABIE41_RS02795 0.69 +0.4 574,307 + ABIE41_RS02795 0.69 +0.3 574,308 - ABIE41_RS02795 0.69 +1.3 574,308 - ABIE41_RS02795 0.69 -0.1 574,308 - ABIE41_RS02795 0.69 -1.4 574,365 - ABIE41_RS02795 0.75 +0.7 574,431 - ABIE41_RS02795 0.83 +1.4 574,431 - ABIE41_RS02795 0.83 +0.2 574,432 - ABIE41_RS02795 0.83 -0.1 574,624 + +0.7 574,625 - +0.0 574,625 - +0.0 574,681 + ABIE41_RS02800 0.10 +0.9 574,681 + ABIE41_RS02800 0.10 -2.1 574,681 + ABIE41_RS02800 0.10 -0.1
Or see this region's nucleotide sequence