Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS13045 and ABID97_RS13050 overlap by 8 nucleotides ABID97_RS13050 and ABID97_RS13055 are separated by 5 nucleotides ABID97_RS13055 and ABID97_RS13060 are separated by 40 nucleotides
ABID97_RS13045: ABID97_RS13045 - DUF4124 domain-containing protein, at 2,713,269 to 2,713,814
_RS13045
ABID97_RS13050: ABID97_RS13050 - DUF2845 domain-containing protein, at 2,713,807 to 2,714,205
_RS13050
ABID97_RS13055: ABID97_RS13055 - serine hydrolase domain-containing protein, at 2,714,211 to 2,716,067
_RS13055
ABID97_RS13060: ABID97_RS13060 - serine hydrolase domain-containing protein, at 2,716,108 to 2,717,292
_RS13060
Position (kb)
2714
2715
2716
2717 Strain fitness (log2 ratio)
-1
0
1
2 at 2713.257 kb on + strand at 2713.327 kb on - strand, within ABID97_RS13045 at 2713.327 kb on - strand, within ABID97_RS13045 at 2713.369 kb on + strand, within ABID97_RS13045 at 2713.581 kb on + strand, within ABID97_RS13045 at 2713.581 kb on + strand, within ABID97_RS13045 at 2713.600 kb on - strand, within ABID97_RS13045 at 2713.629 kb on + strand, within ABID97_RS13045 at 2713.849 kb on - strand, within ABID97_RS13050 at 2714.051 kb on - strand, within ABID97_RS13050 at 2714.117 kb on - strand, within ABID97_RS13050 at 2714.117 kb on - strand, within ABID97_RS13050 at 2714.392 kb on + strand at 2714.698 kb on + strand, within ABID97_RS13055 at 2714.789 kb on - strand, within ABID97_RS13055 at 2714.789 kb on - strand, within ABID97_RS13055 at 2714.932 kb on + strand, within ABID97_RS13055 at 2714.986 kb on + strand, within ABID97_RS13055 at 2714.986 kb on + strand, within ABID97_RS13055 at 2715.341 kb on - strand, within ABID97_RS13055 at 2715.656 kb on - strand, within ABID97_RS13055 at 2716.503 kb on - strand, within ABID97_RS13060 at 2716.803 kb on - strand, within ABID97_RS13060
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 2,713,257 + +0.5 2,713,327 - ABID97_RS13045 0.11 -0.0 2,713,327 - ABID97_RS13045 0.11 +0.2 2,713,369 + ABID97_RS13045 0.18 +0.1 2,713,581 + ABID97_RS13045 0.57 +0.1 2,713,581 + ABID97_RS13045 0.57 +0.6 2,713,600 - ABID97_RS13045 0.61 -0.1 2,713,629 + ABID97_RS13045 0.66 -0.5 2,713,849 - ABID97_RS13050 0.11 +0.3 2,714,051 - ABID97_RS13050 0.61 +0.3 2,714,117 - ABID97_RS13050 0.78 -0.2 2,714,117 - ABID97_RS13050 0.78 +0.2 2,714,392 + -0.6 2,714,698 + ABID97_RS13055 0.26 -0.2 2,714,789 - ABID97_RS13055 0.31 -0.4 2,714,789 - ABID97_RS13055 0.31 -0.3 2,714,932 + ABID97_RS13055 0.39 +2.6 2,714,986 + ABID97_RS13055 0.42 -0.4 2,714,986 + ABID97_RS13055 0.42 -1.0 2,715,341 - ABID97_RS13055 0.61 -1.0 2,715,656 - ABID97_RS13055 0.78 -1.3 2,716,503 - ABID97_RS13060 0.33 -0.1 2,716,803 - ABID97_RS13060 0.59 -0.4
Or see this region's nucleotide sequence