Strain Fitness in Variovorax sp. OAS795 around ABID97_RS04435

Experiment: D,L-Lactate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABID97_RS04430 and ABID97_RS04435 are separated by 39 nucleotidesABID97_RS04435 and ABID97_RS04440 overlap by 4 nucleotides ABID97_RS04430: ABID97_RS04430 - Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha, at 916,956 to 918,086 _RS04430 ABID97_RS04435: ABID97_RS04435 - NAD(P) transhydrogenase subunit alpha, at 918,126 to 918,458 _RS04435 ABID97_RS04440: ABID97_RS04440 - NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta, at 918,455 to 919,882 _RS04440 Position (kb) 918 919Strain fitness (log2 ratio) -1 0 1at 919.260 kb on - strand, within ABID97_RS04440at 919.260 kb on - strand, within ABID97_RS04440

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Per-strain Table

Position Strand Gene LocusTag Fraction D,L-Lactate (C)
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919,260 - ABID97_RS04440 0.56 -0.6
919,260 - ABID97_RS04440 0.56 -0.7

Or see this region's nucleotide sequence