Strain Fitness in Serratia liquefaciens MT49 around IAI46_23110

Experiment: Manganese (II) chloride tetrahydrate 50 uM, aerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Manganese (II) chloride tetrahydrate 50 uM, aerobic
4,930,417	+		IAI46_23105	0.37	+0.3
4,930,418	-		IAI46_23105	0.37	-0.4
4,930,511	-		IAI46_23105	0.47	-1.3
4,930,511	-		IAI46_23105	0.47	-0.2
4,930,581	+		IAI46_23105	0.54	+1.4
4,930,615	-		IAI46_23105	0.58	-0.1
4,930,827	+		IAI46_23105	0.81	+0.2
4,930,827	+		IAI46_23105	0.81	-0.1
4,930,828	-		IAI46_23105	0.81	+0.2
4,930,881	+		IAI46_23105	0.87	+0.0
4,930,939	-				+0.6
4,931,083	-				+0.4
4,931,095	+				+0.2
4,931,096	-				-0.2
4,931,096	-				+0.5
4,931,096	-				+0.1
4,931,098	+				+0.2
4,931,099	-				+0.0
4,931,197	+				+0.5
4,931,211	+				+0.5
4,931,212	-				-0.5
4,931,212	-				+0.2
4,931,227	-				+0.2
4,931,285	-				+0.0
4,931,301	+				-0.1
4,931,403	+				+0.3
4,931,412	-				+0.5
4,931,450	+				-0.1
4,931,451	-				+0.3
4,931,535	-				+0.4
4,931,557	+				+0.7
4,931,557	+				-0.1
4,931,557	+				+0.2
4,931,558	-				+0.7
4,931,583	-		IAI46_23110	0.10	+0.8
4,931,583	-		IAI46_23110	0.10	+0.4
4,931,667	+		IAI46_23110	0.15	+0.0
4,931,667	+		IAI46_23110	0.15	-0.4
4,931,668	-		IAI46_23110	0.15	-1.0
4,931,668	-		IAI46_23110	0.15	+0.6
4,931,782	+		IAI46_23110	0.22	+0.5
4,931,782	+		IAI46_23110	0.22	+0.1
4,931,782	+		IAI46_23110	0.22	-1.0
4,931,784	+		IAI46_23110	0.22	+0.3
4,931,799	+		IAI46_23110	0.23	+0.1
4,931,799	+		IAI46_23110	0.23	-0.9
4,931,800	-		IAI46_23110	0.23	+0.4
4,931,800	-		IAI46_23110	0.23	+0.4
4,931,800	-		IAI46_23110	0.23	+0.4
4,931,801	+		IAI46_23110	0.23	-0.3
4,931,801	+		IAI46_23110	0.23	+1.1
4,931,801	+		IAI46_23110	0.23	+0.0
4,931,802	-		IAI46_23110	0.23	-0.3
4,931,802	-		IAI46_23110	0.23	-0.5
4,931,802	-		IAI46_23110	0.23	+0.2
4,931,848	+		IAI46_23110	0.26	+0.8
4,931,849	-		IAI46_23110	0.26	+1.1
4,931,849	-		IAI46_23110	0.26	+0.6
4,931,920	+		IAI46_23110	0.30	-0.2
4,931,948	-		IAI46_23110	0.32	+0.2
4,931,954	-		IAI46_23110	0.32	+0.4
4,931,975	-		IAI46_23110	0.33	+0.6
4,931,975	-		IAI46_23110	0.33	-0.4
4,932,017	+		IAI46_23110	0.36	-0.0
4,932,019	+		IAI46_23110	0.36	+0.5
4,932,019	+		IAI46_23110	0.36	+0.2
4,932,020	-		IAI46_23110	0.36	-0.1
4,932,063	-		IAI46_23110	0.39	+0.3
4,932,071	+		IAI46_23110	0.39	-0.1
4,932,071	+		IAI46_23110	0.39	+0.3
4,932,071	+		IAI46_23110	0.39	-0.3
4,932,071	+		IAI46_23110	0.39	-0.0
4,932,075	-		IAI46_23110	0.39	+0.4
4,932,075	-		IAI46_23110	0.39	-0.1
4,932,105	-		IAI46_23110	0.41	+0.8
4,932,105	-		IAI46_23110	0.41	+1.0
4,932,105	-		IAI46_23110	0.41	+0.2
4,932,232	-		IAI46_23110	0.49	+1.7
4,932,244	-		IAI46_23110	0.49	+0.3
4,932,255	+		IAI46_23110	0.50	+0.6
4,932,255	+		IAI46_23110	0.50	+0.5
4,932,255	+		IAI46_23110	0.50	-0.0
4,932,300	+		IAI46_23110	0.53	+0.6
4,932,301	-		IAI46_23110	0.53	-0.5
4,932,301	-		IAI46_23110	0.53	-0.1
4,932,342	+		IAI46_23110	0.55	+0.9
4,932,343	-		IAI46_23110	0.55	+0.8
4,932,369	+		IAI46_23110	0.57	+0.3
4,932,369	+		IAI46_23110	0.57	-0.2
4,932,370	-		IAI46_23110	0.57	+0.5
4,932,387	+		IAI46_23110	0.58	-0.3
4,932,387	+		IAI46_23110	0.58	+0.5
4,932,392	-		IAI46_23110	0.58	+0.8
4,932,392	-		IAI46_23110	0.58	+0.8
4,932,397	-		IAI46_23110	0.59	-0.5
4,932,444	-		IAI46_23110	0.61	-0.2
4,932,456	-		IAI46_23110	0.62	-0.3
4,932,459	+		IAI46_23110	0.62	-0.0
4,932,472	+		IAI46_23110	0.63	-0.3
4,932,473	-		IAI46_23110	0.63	+0.3
4,932,473	-		IAI46_23110	0.63	-0.3
4,932,476	+		IAI46_23110	0.63	+0.1
4,932,476	+		IAI46_23110	0.63	+0.3
4,932,476	+		IAI46_23110	0.63	+0.5
4,932,476	+		IAI46_23110	0.63	+0.6
4,932,477	-		IAI46_23110	0.63	-0.6
4,932,477	-		IAI46_23110	0.63	+0.4
4,932,477	-		IAI46_23110	0.63	+0.5
4,932,477	-		IAI46_23110	0.63	+0.6
4,932,477	-		IAI46_23110	0.63	+0.1
4,932,477	-		IAI46_23110	0.63	+0.4
4,932,477	-		IAI46_23110	0.63	+0.1
4,932,696	+		IAI46_23110	0.76	-0.6
4,932,697	-		IAI46_23110	0.76	+0.2
4,932,697	-		IAI46_23110	0.76	+1.1
4,932,726	+		IAI46_23110	0.78	-0.0
4,932,726	+		IAI46_23110	0.78	-0.1
4,932,887	+		IAI46_23110	0.88	-0.6
4,932,888	-		IAI46_23110	0.88	-0.8
4,933,063	+				+1.0
4,933,063	+				+0.2
4,933,080	+				+0.5
4,933,081	-				-0.2
4,933,090	-				-0.2
4,933,120	+				-0.0
4,933,120	+				+0.6
4,933,121	-				+0.4
4,933,121	-				+1.0
4,933,121	-				+0.3
4,933,122	+				+0.4
4,933,122	+				-0.1
4,933,122	+				-0.4
4,933,122	+				+0.3
4,933,123	-				+0.2
4,933,123	-				-1.1
4,933,123	-				+0.2
4,933,123	-				-0.0
4,933,130	+				+0.3
4,933,131	-				+0.3
4,933,131	-				+0.2
4,933,131	-				+1.4
4,933,131	-				-0.5
4,933,131	-				+0.0
4,933,131	-				+0.3
4,933,148	+				-0.2
4,933,149	-				+0.6
4,933,177	+				+0.1
4,933,178	-				-0.5
4,933,301	+				+0.5
4,933,314	-				-0.2
4,933,334	+				+0.4
4,933,335	-				+0.1
4,933,341	+				-1.0
4,933,501	+				+0.5
4,933,501	+				-0.3
4,933,539	+				+0.3
4,933,540	-				-0.2
4,933,587	-				+1.3
4,933,592	+				+0.7
4,933,774	-		IAI46_23115	0.13	-0.4
4,933,834	+		IAI46_23115	0.14	+0.3
4,933,894	+		IAI46_23115	0.16	-0.1
4,933,897	+		IAI46_23115	0.16	-0.5
4,933,898	-		IAI46_23115	0.16	-0.1
4,933,914	+		IAI46_23115	0.16	+0.3
4,933,914	+		IAI46_23115	0.16	+0.1
4,933,914	+		IAI46_23115	0.16	+0.4
4,933,914	+		IAI46_23115	0.16	-0.3
4,933,914	+		IAI46_23115	0.16	+0.0
4,933,914	+		IAI46_23115	0.16	+0.2
4,933,914	+		IAI46_23115	0.16	+0.6
4,933,915	-		IAI46_23115	0.16	+0.6
4,933,915	-		IAI46_23115	0.16	-0.2
4,933,915	-		IAI46_23115	0.16	+0.5
4,933,915	-		IAI46_23115	0.16	-0.8
4,933,915	-		IAI46_23115	0.16	-0.2
4,933,915	-		IAI46_23115	0.16	+0.4
4,933,915	-		IAI46_23115	0.16	-0.8
4,933,915	-		IAI46_23115	0.16	+0.2
4,933,915	-		IAI46_23115	0.16	+0.3
4,933,917	+		IAI46_23115	0.16	+0.3
4,933,917	+		IAI46_23115	0.16	+0.2
4,933,917	+		IAI46_23115	0.16	+0.7
4,933,918	-		IAI46_23115	0.16	+0.3
4,933,918	-		IAI46_23115	0.16	-0.4
4,933,949	+		IAI46_23115	0.17	-0.2
4,933,949	+		IAI46_23115	0.17	-0.0
4,933,950	-		IAI46_23115	0.17	-0.2
4,933,950	-		IAI46_23115	0.17	+0.2
4,933,958	+		IAI46_23115	0.17	-0.2
4,934,029	-		IAI46_23115	0.18	+0.2
4,934,091	+		IAI46_23115	0.20	+0.5