Experiment: Manganese (II) chloride tetrahydrate 50 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_19445 and IAI46_19450 are separated by 669 nucleotides IAI46_19450 and IAI46_19455 are separated by 10 nucleotides
IAI46_19445: IAI46_19445 - LysR family transcriptional regulator, at 4,105,965 to 4,106,888
_19445
IAI46_19450: IAI46_19450 - nitrogen regulatory protein P-II, at 4,107,558 to 4,107,896
_19450
IAI46_19455: IAI46_19455 - NAD+ synthase, at 4,107,907 to 4,109,529
_19455
Position (kb) 4107
4108 Strain fitness (log2 ratio) -2
-1
0
1 at 4106.681 kb on - strand, within IAI46_19445 at 4106.681 kb on - strand, within IAI46_19445 at 4106.751 kb on + strand, within IAI46_19445 at 4106.751 kb on + strand, within IAI46_19445 at 4106.751 kb on + strand, within IAI46_19445 at 4106.751 kb on + strand, within IAI46_19445 at 4106.751 kb on + strand, within IAI46_19445 at 4106.752 kb on - strand, within IAI46_19445 at 4106.859 kb on - strand at 4106.945 kb on + strand at 4106.945 kb on + strand at 4106.945 kb on + strand at 4106.946 kb on - strand at 4106.946 kb on - strand at 4106.946 kb on - strand at 4106.953 kb on + strand at 4106.954 kb on - strand at 4106.954 kb on - strand at 4106.954 kb on - strand at 4107.018 kb on - strand at 4107.054 kb on + strand at 4107.072 kb on + strand at 4107.072 kb on + strand at 4107.102 kb on - strand at 4107.109 kb on + strand at 4107.110 kb on - strand at 4107.110 kb on - strand at 4107.110 kb on - strand at 4107.135 kb on + strand at 4107.136 kb on - strand at 4107.350 kb on + strand at 4107.350 kb on + strand at 4107.359 kb on + strand at 4107.359 kb on + strand at 4107.408 kb on - strand at 4107.559 kb on + strand at 4107.560 kb on - strand at 4107.560 kb on - strand at 4107.594 kb on - strand, within IAI46_19450 at 4107.594 kb on - strand, within IAI46_19450 at 4107.745 kb on + strand, within IAI46_19450 at 4107.745 kb on + strand, within IAI46_19450 at 4107.746 kb on - strand, within IAI46_19450 at 4107.761 kb on - strand, within IAI46_19450 at 4107.875 kb on + strand at 4107.879 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 50 uM, aerobic remove 4,106,681 - IAI46_19445 0.77 +0.9 4,106,681 - IAI46_19445 0.77 -1.4 4,106,751 + IAI46_19445 0.85 -0.3 4,106,751 + IAI46_19445 0.85 -0.1 4,106,751 + IAI46_19445 0.85 +0.6 4,106,751 + IAI46_19445 0.85 -0.1 4,106,751 + IAI46_19445 0.85 -0.6 4,106,752 - IAI46_19445 0.85 +0.3 4,106,859 - +1.1 4,106,945 + -0.4 4,106,945 + -1.1 4,106,945 + -1.9 4,106,946 - +0.4 4,106,946 - -0.9 4,106,946 - -0.8 4,106,953 + -0.4 4,106,954 - -0.7 4,106,954 - +0.2 4,106,954 - +0.4 4,107,018 - -0.7 4,107,054 + -0.0 4,107,072 + -0.4 4,107,072 + +0.3 4,107,102 - -0.1 4,107,109 + -0.6 4,107,110 - +1.2 4,107,110 - +0.2 4,107,110 - +0.2 4,107,135 + -1.9 4,107,136 - +0.2 4,107,350 + -0.4 4,107,350 + +0.8 4,107,359 + +0.4 4,107,359 + -0.8 4,107,408 - +1.6 4,107,559 + +0.9 4,107,560 - +0.7 4,107,560 - +0.4 4,107,594 - IAI46_19450 0.11 +1.0 4,107,594 - IAI46_19450 0.11 -1.3 4,107,745 + IAI46_19450 0.55 +0.8 4,107,745 + IAI46_19450 0.55 -0.0 4,107,746 - IAI46_19450 0.55 -0.4 4,107,761 - IAI46_19450 0.60 -0.0 4,107,875 + +0.9 4,107,879 - +0.1
Or see this region's nucleotide sequence