Experiment: Manganese (II) chloride tetrahydrate 50 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_18460 and IAI46_18465 are separated by 49 nucleotides IAI46_18465 and IAI46_18470 are separated by 264 nucleotides
IAI46_18460: IAI46_18460 - phosphoenolpyruvate-protein phosphotransferase PtsI, at 3,885,661 to 3,887,388
_18460
IAI46_18465: IAI46_18465 - PTS glucose transporter subunit IIA, at 3,887,438 to 3,887,947
_18465
IAI46_18470: IAI46_18470 - HAMP domain-containing protein, at 3,888,212 to 3,889,528
_18470
Position (kb)
3887
3888 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3886.549 kb on - strand, within IAI46_18460 at 3886.743 kb on + strand, within IAI46_18460 at 3887.027 kb on + strand, within IAI46_18460 at 3887.036 kb on - strand, within IAI46_18460 at 3887.037 kb on + strand, within IAI46_18460 at 3887.037 kb on + strand, within IAI46_18460 at 3887.204 kb on + strand, within IAI46_18460 at 3887.358 kb on + strand at 3887.419 kb on + strand at 3887.419 kb on + strand at 3887.559 kb on + strand, within IAI46_18465 at 3887.560 kb on - strand, within IAI46_18465 at 3887.945 kb on + strand at 3887.946 kb on - strand at 3887.961 kb on - strand at 3887.961 kb on - strand at 3888.010 kb on + strand at 3888.014 kb on + strand at 3888.014 kb on + strand at 3888.014 kb on + strand at 3888.015 kb on - strand at 3888.015 kb on - strand at 3888.015 kb on - strand at 3888.023 kb on + strand at 3888.023 kb on + strand at 3888.024 kb on - strand at 3888.024 kb on - strand at 3888.059 kb on - strand at 3888.082 kb on + strand at 3888.083 kb on - strand at 3888.138 kb on + strand at 3888.139 kb on - strand at 3888.139 kb on - strand at 3888.139 kb on - strand at 3888.146 kb on + strand at 3888.146 kb on + strand at 3888.146 kb on + strand at 3888.147 kb on - strand at 3888.210 kb on + strand at 3888.210 kb on + strand at 3888.211 kb on - strand at 3888.211 kb on - strand at 3888.428 kb on + strand, within IAI46_18470 at 3888.511 kb on + strand, within IAI46_18470 at 3888.512 kb on - strand, within IAI46_18470 at 3888.559 kb on - strand, within IAI46_18470 at 3888.559 kb on - strand, within IAI46_18470 at 3888.559 kb on - strand, within IAI46_18470 at 3888.663 kb on + strand, within IAI46_18470 at 3888.727 kb on + strand, within IAI46_18470 at 3888.924 kb on - strand, within IAI46_18470
Per-strain Table
Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 50 uM, aerobic remove 3,886,549 - IAI46_18460 0.51 -0.1 3,886,743 + IAI46_18460 0.63 -1.2 3,887,027 + IAI46_18460 0.79 +0.1 3,887,036 - IAI46_18460 0.80 -1.0 3,887,037 + IAI46_18460 0.80 -0.5 3,887,037 + IAI46_18460 0.80 -0.8 3,887,204 + IAI46_18460 0.89 -1.0 3,887,358 + +0.2 3,887,419 + -3.4 3,887,419 + -1.6 3,887,559 + IAI46_18465 0.24 -0.1 3,887,560 - IAI46_18465 0.24 +1.1 3,887,945 + +0.7 3,887,946 - -0.7 3,887,961 - -1.3 3,887,961 - -0.1 3,888,010 + -0.8 3,888,014 + +0.8 3,888,014 + -1.6 3,888,014 + -0.1 3,888,015 - -1.0 3,888,015 - +0.2 3,888,015 - +1.2 3,888,023 + -0.5 3,888,023 + +0.9 3,888,024 - +0.7 3,888,024 - +0.6 3,888,059 - +0.6 3,888,082 + -0.5 3,888,083 - +1.0 3,888,138 + -0.7 3,888,139 - +0.4 3,888,139 - -0.0 3,888,139 - -0.1 3,888,146 + -1.0 3,888,146 + -0.5 3,888,146 + +0.7 3,888,147 - -1.3 3,888,210 + -0.4 3,888,210 + +0.4 3,888,211 - +0.4 3,888,211 - +1.7 3,888,428 + IAI46_18470 0.16 +1.5 3,888,511 + IAI46_18470 0.23 -0.5 3,888,512 - IAI46_18470 0.23 -0.4 3,888,559 - IAI46_18470 0.26 -0.5 3,888,559 - IAI46_18470 0.26 +0.3 3,888,559 - IAI46_18470 0.26 -0.1 3,888,663 + IAI46_18470 0.34 +1.5 3,888,727 + IAI46_18470 0.39 -0.1 3,888,924 - IAI46_18470 0.54 -0.2
Or see this region's nucleotide sequence