Experiment: Manganese (II) chloride tetrahydrate 50 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_17585 and IAI46_17590 are separated by 269 nucleotides IAI46_17590 and IAI46_17595 are separated by 1 nucleotides IAI46_17595 and IAI46_17600 are separated by 265 nucleotides
IAI46_17585: IAI46_17585 - gluconate 5-dehydrogenase, at 3,706,211 to 3,706,975
_17585
IAI46_17590: IAI46_17590 - LacI family DNA-binding transcriptional regulator, at 3,707,245 to 3,708,228
_17590
IAI46_17595: IAI46_17595 - DUF1097 domain-containing protein, at 3,708,230 to 3,708,724
_17595
IAI46_17600: IAI46_17600 - MFS transporter, at 3,708,990 to 3,710,234
_17600
Position (kb)
3707
3708
3709 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3706.420 kb on + strand, within IAI46_17585 at 3706.421 kb on - strand, within IAI46_17585 at 3706.441 kb on - strand, within IAI46_17585 at 3706.582 kb on + strand, within IAI46_17585 at 3706.582 kb on + strand, within IAI46_17585 at 3706.613 kb on + strand, within IAI46_17585 at 3706.614 kb on - strand, within IAI46_17585 at 3706.614 kb on - strand, within IAI46_17585 at 3706.636 kb on + strand, within IAI46_17585 at 3706.636 kb on + strand, within IAI46_17585 at 3706.688 kb on + strand, within IAI46_17585 at 3706.688 kb on + strand, within IAI46_17585 at 3706.689 kb on - strand, within IAI46_17585 at 3706.689 kb on - strand, within IAI46_17585 at 3706.748 kb on - strand, within IAI46_17585 at 3706.771 kb on + strand, within IAI46_17585 at 3706.772 kb on - strand, within IAI46_17585 at 3706.869 kb on - strand, within IAI46_17585 at 3706.941 kb on - strand at 3706.952 kb on - strand at 3706.975 kb on + strand at 3707.000 kb on - strand at 3707.001 kb on + strand at 3707.069 kb on + strand at 3707.069 kb on + strand at 3707.069 kb on + strand at 3707.070 kb on - strand at 3707.070 kb on - strand at 3707.175 kb on + strand at 3707.195 kb on - strand at 3707.205 kb on + strand at 3707.274 kb on + strand at 3707.275 kb on - strand at 3707.318 kb on - strand at 3707.516 kb on - strand, within IAI46_17590 at 3707.536 kb on + strand, within IAI46_17590 at 3707.536 kb on + strand, within IAI46_17590 at 3707.536 kb on + strand, within IAI46_17590 at 3707.536 kb on + strand, within IAI46_17590 at 3707.542 kb on + strand, within IAI46_17590 at 3707.542 kb on + strand, within IAI46_17590 at 3707.543 kb on - strand, within IAI46_17590 at 3707.543 kb on - strand, within IAI46_17590 at 3707.543 kb on - strand, within IAI46_17590 at 3707.569 kb on - strand, within IAI46_17590 at 3707.588 kb on - strand, within IAI46_17590 at 3707.626 kb on - strand, within IAI46_17590 at 3707.626 kb on - strand, within IAI46_17590 at 3707.626 kb on - strand, within IAI46_17590 at 3707.644 kb on + strand, within IAI46_17590 at 3707.644 kb on + strand, within IAI46_17590 at 3707.836 kb on + strand, within IAI46_17590 at 3707.945 kb on - strand, within IAI46_17590 at 3707.966 kb on + strand, within IAI46_17590 at 3707.966 kb on + strand, within IAI46_17590 at 3707.967 kb on - strand, within IAI46_17590 at 3707.967 kb on - strand, within IAI46_17590 at 3707.967 kb on - strand, within IAI46_17590 at 3707.999 kb on + strand, within IAI46_17590 at 3708.108 kb on + strand, within IAI46_17590 at 3708.162 kb on + strand at 3708.227 kb on - strand at 3708.330 kb on - strand, within IAI46_17595 at 3708.481 kb on - strand, within IAI46_17595 at 3708.610 kb on - strand, within IAI46_17595 at 3708.610 kb on - strand, within IAI46_17595 at 3708.616 kb on + strand, within IAI46_17595 at 3708.655 kb on + strand, within IAI46_17595 at 3708.725 kb on - strand at 3708.787 kb on - strand at 3708.864 kb on + strand at 3708.864 kb on + strand at 3709.033 kb on - strand at 3709.033 kb on - strand at 3709.135 kb on + strand, within IAI46_17600 at 3709.136 kb on - strand, within IAI46_17600 at 3709.143 kb on + strand, within IAI46_17600 at 3709.144 kb on - strand, within IAI46_17600 at 3709.148 kb on - strand, within IAI46_17600
Per-strain Table
Position Strand Gene LocusTag Fraction Manganese (II) chloride tetrahydrate 50 uM, aerobic remove 3,706,420 + IAI46_17585 0.27 -0.0 3,706,421 - IAI46_17585 0.27 +0.2 3,706,441 - IAI46_17585 0.30 +0.5 3,706,582 + IAI46_17585 0.48 -0.3 3,706,582 + IAI46_17585 0.48 -1.0 3,706,613 + IAI46_17585 0.53 +0.7 3,706,614 - IAI46_17585 0.53 +0.4 3,706,614 - IAI46_17585 0.53 -0.6 3,706,636 + IAI46_17585 0.56 +0.7 3,706,636 + IAI46_17585 0.56 +1.7 3,706,688 + IAI46_17585 0.62 +0.7 3,706,688 + IAI46_17585 0.62 +0.4 3,706,689 - IAI46_17585 0.62 +0.4 3,706,689 - IAI46_17585 0.62 -0.6 3,706,748 - IAI46_17585 0.70 +0.5 3,706,771 + IAI46_17585 0.73 +0.7 3,706,772 - IAI46_17585 0.73 +0.4 3,706,869 - IAI46_17585 0.86 +0.1 3,706,941 - +0.1 3,706,952 - +0.1 3,706,975 + +0.2 3,707,000 - -0.5 3,707,001 + -0.8 3,707,069 + +2.5 3,707,069 + -1.1 3,707,069 + -0.7 3,707,070 - +1.2 3,707,070 - -0.1 3,707,175 + -0.5 3,707,195 - +1.7 3,707,205 + -0.6 3,707,274 + -3.2 3,707,275 - +0.5 3,707,318 - +0.9 3,707,516 - IAI46_17590 0.28 -0.3 3,707,536 + IAI46_17590 0.30 +0.2 3,707,536 + IAI46_17590 0.30 -0.4 3,707,536 + IAI46_17590 0.30 +0.1 3,707,536 + IAI46_17590 0.30 +1.2 3,707,542 + IAI46_17590 0.30 +0.5 3,707,542 + IAI46_17590 0.30 -0.7 3,707,543 - IAI46_17590 0.30 +0.6 3,707,543 - IAI46_17590 0.30 +0.8 3,707,543 - IAI46_17590 0.30 -0.6 3,707,569 - IAI46_17590 0.33 +1.0 3,707,588 - IAI46_17590 0.35 +0.9 3,707,626 - IAI46_17590 0.39 +0.5 3,707,626 - IAI46_17590 0.39 +0.1 3,707,626 - IAI46_17590 0.39 +0.2 3,707,644 + IAI46_17590 0.41 +0.5 3,707,644 + IAI46_17590 0.41 -0.1 3,707,836 + IAI46_17590 0.60 +0.8 3,707,945 - IAI46_17590 0.71 -0.5 3,707,966 + IAI46_17590 0.73 +1.2 3,707,966 + IAI46_17590 0.73 +0.6 3,707,967 - IAI46_17590 0.73 +0.5 3,707,967 - IAI46_17590 0.73 +0.2 3,707,967 - IAI46_17590 0.73 +1.0 3,707,999 + IAI46_17590 0.77 +1.2 3,708,108 + IAI46_17590 0.88 +1.1 3,708,162 + -0.0 3,708,227 - +0.7 3,708,330 - IAI46_17595 0.20 +0.8 3,708,481 - IAI46_17595 0.51 -1.3 3,708,610 - IAI46_17595 0.77 -1.1 3,708,610 - IAI46_17595 0.77 +0.6 3,708,616 + IAI46_17595 0.78 +0.5 3,708,655 + IAI46_17595 0.86 -0.4 3,708,725 - -0.4 3,708,787 - +0.1 3,708,864 + -1.1 3,708,864 + +0.1 3,709,033 - -0.4 3,709,033 - -0.4 3,709,135 + IAI46_17600 0.12 -0.3 3,709,136 - IAI46_17600 0.12 +0.5 3,709,143 + IAI46_17600 0.12 -0.1 3,709,144 - IAI46_17600 0.12 -2.9 3,709,148 - IAI46_17600 0.13 +0.1
Or see this region's nucleotide sequence